RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 TRBV19A0A075B6N1 114 aa11.65□□□□□ -0.54
CPSF7-205ENST00000439958 FAM223BA6NKX1 122 aa11.65□□□□□ -0.54
CPSF7-205ENST00000439958 IBA57Q5T440 356 aaKnown RBP11.65□□□□□ -0.54
CPSF7-205ENST00000439958 WFDC3Q8IUB2 231 aa11.65□□□□□ -0.54
CPSF7-205ENST00000439958 FAM223AQ8IWN6 122 aa11.65□□□□□ -0.54
CPSF7-205ENST00000439958 TXN2Q99757 166 aa11.65□□□□□ -0.54
CPSF7-205ENST00000439958 TPPP3Q9BW30 176 aa11.65□□□□□ -0.54
CPSF7-205ENST00000439958 CTDSP1Q9GZU7 261 aa11.65□□□□□ -0.54
CPSF7-205ENST00000439958 TCRAP04437 139 aa11.64□□□□□ -0.55
CPSF7-205ENST00000439958 TFPI2P48307 235 aa11.64□□□□□ -0.55
CPSF7-205ENST00000439958 GBGT1Q8N5D6 347 aa11.64□□□□□ -0.55
CPSF7-205ENST00000439958 ATG101Q9BSB4 218 aa11.64□□□□□ -0.55
CPSF7-205ENST00000439958 IGKV2-40A0A087WW87 121 aaPredicted RBP11.64□□□□□ -0.55
CPSF7-205ENST00000439958 IGKV2D-40P01614 121 aaPredicted RBP11.64□□□□□ -0.55
CPSF7-205ENST00000439958 PPIFP30405 207 aaKnown RBP11.64□□□□□ -0.55
CPSF7-205ENST00000439958 C11orf52Q96A22 123 aa11.64□□□□□ -0.55
CPSF7-205ENST00000439958 ANAPC16Q96DE5 110 aa11.64□□□□□ -0.55
CPSF7-205ENST00000439958 A0A0G2JLM5 398 aa11.64□□□□□ -0.55
CPSF7-205ENST00000439958 DAZAP1Q96EP5 407 aaKnown RBP11.64□□□□□ -0.55
CPSF7-205ENST00000439958 DUX3Q96PT4 197 aa11.64□□□□□ -0.55
CPSF7-205ENST00000439958 A0A1W2PRX2 142 aa11.63□□□□□ -0.55
CPSF7-205ENST00000439958 J3KRW8 73 aa11.63□□□□□ -0.55
CPSF7-205ENST00000439958 DEFB136Q30KP8 78 aa11.63□□□□□ -0.55
CPSF7-205ENST00000439958 PDZD11Q5EBL8 140 aa11.63□□□□□ -0.55
CPSF7-205ENST00000439958 K7EQM0 130 aa11.63□□□□□ -0.55
CPSF7-205ENST00000439958 TM4SF20Q53R12 229 aa11.63□□□□□ -0.55
CPSF7-205ENST00000439958 OTORQ9NRC9 128 aa11.63□□□□□ -0.55
CPSF7-205ENST00000439958 RPEL1Q2QD12 228 aa11.63□□□□□ -0.55
CPSF7-205ENST00000439958 Q8TAT8 98 aa11.63□□□□□ -0.55
CPSF7-205ENST00000439958 ZNF414Q96IQ9 312 aa11.63□□□□□ -0.55
CPSF7-205ENST00000439958 F8P00451 2351 aa11.62□□□□□ -0.55
CPSF7-205ENST00000439958 TUBA4BQ9H853 241 aa11.62□□□□□ -0.55
CPSF7-205ENST00000439958 CDC42EP3Q9UKI2 254 aa11.62□□□□□ -0.55
CPSF7-205ENST00000439958 TMSB15BA0A087X1C1 80 aa11.62□□□□□ -0.55
CPSF7-205ENST00000439958 SNRPEP62304 92 aaKnown RBP11.62□□□□□ -0.55
CPSF7-205ENST00000439958 SRSF2Q01130 221 aaKnown RBP11.62□□□□□ -0.55
CPSF7-205ENST00000439958 MRPL54Q6P161 138 aaKnown RBP11.62□□□□□ -0.55
CPSF7-205ENST00000439958 CXorf65A6NEN9 183 aa11.61□□□□□ -0.55
CPSF7-205ENST00000439958 IGLC2P0DOY2 106 aa11.61□□□□□ -0.55
CPSF7-205ENST00000439958 NDUFA6P56556 154 aa11.61□□□□□ -0.55
CPSF7-205ENST00000439958 USMG5Q96IX5 58 aa11.61□□□□□ -0.55
CPSF7-205ENST00000439958 ARL2-SNX15V9GYD0 113 aa11.61□□□□□ -0.55
CPSF7-205ENST00000439958 SETXQ7Z333 2677 aaKnown RBP11.61□□□□□ -0.55
CPSF7-205ENST00000439958 ZFAND3Q9H8U3 227 aa11.61□□□□□ -0.55
CPSF7-205ENST00000439958 C9JCJ5 164 aa11.6□□□□□ -0.55
CPSF7-205ENST00000439958 ZNF705DP0CH99 300 aaPredicted RBP11.6□□□□□ -0.55
CPSF7-205ENST00000439958 ZNF705BP0CI00 300 aaPredicted RBP11.6□□□□□ -0.55
CPSF7-205ENST00000439958 SIGLEC15Q6ZMC9 328 aa11.6□□□□□ -0.55
CPSF7-205ENST00000439958 C16orf92Q96LL3 132 aa11.6□□□□□ -0.55
CPSF7-205ENST00000439958 TMEM14CQ9P0S9 112 aa11.6□□□□□ -0.55
CPSF7-205ENST00000439958 RNF24Q9Y225 148 aa11.6□□□□□ -0.55
CPSF7-205ENST00000439958 C2CD3Q4AC94 2353 aa11.6□□□□□ -0.55
CPSF7-205ENST00000439958 PPP1R2P9O14990 202 aa11.6□□□□□ -0.55
CPSF7-205ENST00000439958 GATCO43716 136 aaKnown RBP11.6□□□□□ -0.55
CPSF7-205ENST00000439958 EDN2P20800 178 aa11.6□□□□□ -0.55
CPSF7-205ENST00000439958 S100A7P31151 101 aa11.6□□□□□ -0.55
CPSF7-205ENST00000439958 OTOGQ6ZRI0 2925 aa11.6□□□□□ -0.55
CPSF7-205ENST00000439958 BUB3O43684 328 aa11.6□□□□□ -0.55
CPSF7-205ENST00000439958 GPR82Q96P67 336 aa11.6□□□□□ -0.55
CPSF7-205ENST00000439958 PEF1Q9UBV8 284 aaKnown RBP11.6□□□□□ -0.55
CPSF7-205ENST00000439958 DNAJC9-AS1A6NH13 148 aa11.59□□□□□ -0.55
CPSF7-205ENST00000439958 SYNJ2BPP57105 145 aa11.59□□□□□ -0.55
CPSF7-205ENST00000439958 DEFB1P60022 68 aa11.59□□□□□ -0.55
CPSF7-205ENST00000439958 FOXC2Q99958 501 aa11.59□□□□□ -0.55
CPSF7-205ENST00000439958 ZNF702PQ9H963 129 aa11.59□□□□□ -0.55
CPSF7-205ENST00000439958 NIPBLQ6KC79 2804 aaeCLIP11.58□□□□□ -0.56
CPSF7-205ENST00000439958 GZMBP10144 247 aa11.58□□□□□ -0.56
CPSF7-205ENST00000439958 TAS2R60P59551 318 aa11.58□□□□□ -0.56
CPSF7-205ENST00000439958 FABP9Q0Z7S8 132 aa11.58□□□□□ -0.56
CPSF7-205ENST00000439958 KLHDC1Q8N7A1 406 aa11.58□□□□□ -0.56
CPSF7-205ENST00000439958 HIVEP1P15822 2718 aa11.58□□□□□ -0.56
CPSF7-205ENST00000439958 PFN1P07737 140 aaKnown RBP11.58□□□□□ -0.56
CPSF7-205ENST00000439958 ERCC8Q13216 396 aa11.58□□□□□ -0.56
CPSF7-205ENST00000439958 TMEM183BQ1AE95 376 aa11.58□□□□□ -0.56
CPSF7-205ENST00000439958 FAM106AQ4KMX7 169 aa11.58□□□□□ -0.56
CPSF7-205ENST00000439958 IGF2BP2-AS1Q96M15 143 aa11.58□□□□□ -0.56
CPSF7-205ENST00000439958 TMEM242Q9NWH2 141 aa11.58□□□□□ -0.56
CPSF7-205ENST00000439958 SMAD5-AS1Q9Y6J3 95 aa11.58□□□□□ -0.56
CPSF7-205ENST00000439958 CLPSL1A2RUU4 121 aa11.57□□□□□ -0.56
CPSF7-205ENST00000439958 P01737 135 aa11.57□□□□□ -0.56
CPSF7-205ENST00000439958 CT45A10P0DMU9 189 aa11.57□□□□□ -0.56
CPSF7-205ENST00000439958 CBLN1P23435 193 aa11.57□□□□□ -0.56
CPSF7-205ENST00000439958 CAMPP49913 170 aa11.57□□□□□ -0.56
CPSF7-205ENST00000439958 C18orf65Q6ZTR6 163 aa11.57□□□□□ -0.56
CPSF7-205ENST00000439958 BIN3Q9NQY0 253 aa11.57□□□□□ -0.56
CPSF7-205ENST00000439958 LOC105371267A0A1B0GV96 52 aa11.57□□□□□ -0.56
CPSF7-205ENST00000439958 FSHBP01225 129 aa11.57□□□□□ -0.56
CPSF7-205ENST00000439958 IMMP2LQ96T52 175 aa11.57□□□□□ -0.56
CPSF7-205ENST00000439958 RHPN1-AS1Q9BWJ2 59 aa11.57□□□□□ -0.56
CPSF7-205ENST00000439958 PSG8Q9UQ74 426 aa11.57□□□□□ -0.56
CPSF7-205ENST00000439958 CHEK1O14757 476 aa11.57□□□□□ -0.56
CPSF7-205ENST00000439958 FRMD6-AS1P0C7T7 363 aa11.57□□□□□ -0.56
CPSF7-205ENST00000439958 RPL19P84098 196 aaKnown RBP11.57□□□□□ -0.56
CPSF7-205ENST00000439958 PSG9Q00887 426 aa11.57□□□□□ -0.56
CPSF7-205ENST00000439958 C19orf54Q5BKX5 351 aa11.57□□□□□ -0.56
CPSF7-205ENST00000439958 NUDT10Q8NFP7 164 aa11.57□□□□□ -0.56
CPSF7-205ENST00000439958 NUDT11Q96G61 164 aa11.57□□□□□ -0.56
CPSF7-205ENST00000439958 FMC1Q96HJ9 113 aa11.57□□□□□ -0.56
CPSF7-205ENST00000439958 MUC21A0A0G2JKD1 596 aa11.56□□□□□ -0.56
CPSF7-205ENST00000439958 MUC21A0A140T8X8 626 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms