RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 SFTA2Q6UW10 78 aa9.41□□□□□ -0.9
SMPD4-209ENST00000439886 ATP5L2Q7Z4Y8 100 aa9.41□□□□□ -0.9
SMPD4-209ENST00000439886 GAGE12JA6NER3 117 aa9.41□□□□□ -0.9
SMPD4-209ENST00000439886 GAGE7O76087 117 aa9.41□□□□□ -0.9
SMPD4-209ENST00000439886 GAGE12FP0CL80 117 aa9.41□□□□□ -0.9
SMPD4-209ENST00000439886 GAGE12GP0CL81 117 aa9.41□□□□□ -0.9
SMPD4-209ENST00000439886 GAGE12IP0CL82 117 aa9.41□□□□□ -0.9
SMPD4-209ENST00000439886 CCL11P51671 97 aa9.41□□□□□ -0.9
SMPD4-209ENST00000439886 LOXL1Q08397 574 aaPredicted RBP9.41□□□□□ -0.9
SMPD4-209ENST00000439886 GAGE4Q13068 117 aa9.41□□□□□ -0.9
SMPD4-209ENST00000439886 TEX29Q8N6K0 151 aa9.41□□□□□ -0.9
SMPD4-209ENST00000439886 FXYD5Q96DB9 178 aa9.41□□□□□ -0.9
SMPD4-209ENST00000439886 RAX2Q96IS3 184 aa9.41□□□□□ -0.9
SMPD4-209ENST00000439886 NHP2Q9NX24 153 aaKnown RBP9.41□□□□□ -0.9
SMPD4-209ENST00000439886 CCL8P80075 99 aa9.41□□□□□ -0.9
SMPD4-209ENST00000439886 LCNL1Q6ZST4 164 aa9.41□□□□□ -0.9
SMPD4-209ENST00000439886 FAM231DQ6ZW35 169 aa9.41□□□□□ -0.9
SMPD4-209ENST00000439886 C3orf56Q8N813 242 aa9.41□□□□□ -0.9
SMPD4-209ENST00000439886 PRR7Q8TB68 274 aa9.41□□□□□ -0.9
SMPD4-209ENST00000439886 CEP192Q8TEP8 1941 aa9.4□□□□□ -0.9
SMPD4-209ENST00000439886 WISP2O76076 250 aa9.4□□□□□ -0.9
SMPD4-209ENST00000439886 CT45A10P0DMU9 189 aa9.4□□□□□ -0.9
SMPD4-209ENST00000439886 MZT1Q08AG7 82 aa9.4□□□□□ -0.9
SMPD4-209ENST00000439886 ZADH2Q8N4Q0 377 aa9.4□□□□□ -0.9
SMPD4-209ENST00000439886 ZNF414Q96IQ9 312 aa9.4□□□□□ -0.9
SMPD4-209ENST00000439886 C1RLQ9NZP8 487 aa9.4□□□□□ -0.9
SMPD4-209ENST00000439886 TCRBV4S1A1TA0A5B7 111 aa9.4□□□□□ -0.9
SMPD4-209ENST00000439886 D6R8Y8 96 aa9.4□□□□□ -0.9
SMPD4-209ENST00000439886 C2orf83Q53S99 150 aa9.4□□□□□ -0.9
SMPD4-209ENST00000439886 ZFAND6Q6FIF0 208 aa9.4□□□□□ -0.9
SMPD4-209ENST00000439886 RAB9BQ9NP90 201 aa9.4□□□□□ -0.9
SMPD4-209ENST00000439886 A0A1B0GWB2 263 aa9.4□□□□□ -0.91
SMPD4-209ENST00000439886 SMIM13P0DJ93 91 aa9.4□□□□□ -0.91
SMPD4-209ENST00000439886 TRAV25A0A0B4J276 109 aa9.39□□□□□ -0.91
SMPD4-209ENST00000439886 CEACAM4O75871 244 aa9.39□□□□□ -0.91
SMPD4-209ENST00000439886 TCRAP04437 139 aa9.39□□□□□ -0.91
SMPD4-209ENST00000439886 DIAPH2-AS1Q14236 149 aa9.39□□□□□ -0.91
SMPD4-209ENST00000439886 C17orf58Q2M2W7 97 aa9.39□□□□□ -0.91
SMPD4-209ENST00000439886 ZNF747Q9BV97 191 aa9.39□□□□□ -0.91
SMPD4-209ENST00000439886 INSIG2Q9Y5U4 225 aa9.39□□□□□ -0.91
SMPD4-209ENST00000439886 SPTA1P02549 2419 aa9.39□□□□□ -0.91
SMPD4-209ENST00000439886 K7ESF4 209 aa9.39□□□□□ -0.91
SMPD4-209ENST00000439886 PPIFP30405 207 aaKnown RBP9.39□□□□□ -0.91
SMPD4-209ENST00000439886 WT1-ASQ06250 92 aa9.39□□□□□ -0.91
SMPD4-209ENST00000439886 C2orf91Q6ZV80 131 aa9.39□□□□□ -0.91
SMPD4-209ENST00000439886 BCL6BQ8N143 479 aaPredicted RBP9.39□□□□□ -0.91
SMPD4-209ENST00000439886 SPANXB1Q9NS25 103 aaPredicted RBP9.39□□□□□ -0.91
SMPD4-209ENST00000439886 ABCA4P78363 2273 aa9.39□□□□□ -0.91
SMPD4-209ENST00000439886 SRRM5B3KS81 715 aa9.38□□□□□ -0.91
SMPD4-209ENST00000439886 FCGR2BP31994 310 aaPredicted RBP9.38□□□□□ -0.91
SMPD4-209ENST00000439886 DLX1P56177 255 aa9.38□□□□□ -0.91
SMPD4-209ENST00000439886 TNFAIP6P98066 277 aaPredicted RBP9.38□□□□□ -0.91
SMPD4-209ENST00000439886 AMN1Q8IY45 258 aa9.38□□□□□ -0.91
SMPD4-209ENST00000439886 DDB2Q92466 427 aa9.38□□□□□ -0.91
SMPD4-209ENST00000439886 PRELID3AQ96N28 172 aa9.38□□□□□ -0.91
SMPD4-209ENST00000439886 TMEM213A2RRL7 107 aa9.38□□□□□ -0.91
SMPD4-209ENST00000439886 CKS2P33552 79 aa9.38□□□□□ -0.91
SMPD4-209ENST00000439886 OSR1Q8TAX0 266 aaPredicted RBP9.38□□□□□ -0.91
SMPD4-209ENST00000439886 A0A1B0GXF2 115 aa9.38□□□□□ -0.91
SMPD4-209ENST00000439886 PRSS29PA6NIE9 313 aa9.38□□□□□ -0.91
SMPD4-209ENST00000439886 CCDC179H3BU77 68 aa9.38□□□□□ -0.91
SMPD4-209ENST00000439886 TNFRSF1AP19438 455 aa9.38□□□□□ -0.91
SMPD4-209ENST00000439886 FAM90A1Q86YD7 464 aa9.38□□□□□ -0.91
SMPD4-209ENST00000439886 TPSG1Q9NRR2 321 aa9.38□□□□□ -0.91
SMPD4-209ENST00000439886 APOMO95445 188 aa9.37□□□□□ -0.91
SMPD4-209ENST00000439886 SP9P0CG40 484 aa9.37□□□□□ -0.91
SMPD4-209ENST00000439886 Q6ZT83 130 aa9.37□□□□□ -0.91
SMPD4-209ENST00000439886 BOD1L1Q8NFC6 3051 aa9.37□□□□□ -0.91
SMPD4-209ENST00000439886 DSCAMO60469 2012 aa9.37□□□□□ -0.91
SMPD4-209ENST00000439886 TMEM189A5PLL7 270 aa9.37□□□□□ -0.91
SMPD4-209ENST00000439886 M0R3E3 92 aa9.37□□□□□ -0.91
SMPD4-209ENST00000439886 SMAD7O15105 426 aaKnown RBP9.37□□□□□ -0.91
SMPD4-209ENST00000439886 TWIST1Q15672 202 aa9.37□□□□□ -0.91
SMPD4-209ENST00000439886 AMTNQ6UX39 209 aa9.37□□□□□ -0.91
SMPD4-209ENST00000439886 TDHQ8IZJ6 230 aa9.37□□□□□ -0.91
SMPD4-209ENST00000439886 VGLL1Q99990 258 aa9.37□□□□□ -0.91
SMPD4-209ENST00000439886 DKK2Q9UBU2 259 aa9.37□□□□□ -0.91
SMPD4-209ENST00000439886 RPUSD1Q9UJJ7 312 aaKnown RBP9.37□□□□□ -0.91
SMPD4-209ENST00000439886 HIGD1AQ9Y241 93 aa9.37□□□□□ -0.91
SMPD4-209ENST00000439886 MFAP4P55083 255 aa9.37□□□□□ -0.91
SMPD4-209ENST00000439886 COL25A1Q9BXS0 654 aaPredicted RBP9.37□□□□□ -0.91
SMPD4-209ENST00000439886 RNF7Q9UBF6 113 aa9.37□□□□□ -0.91
SMPD4-209ENST00000439886 H3BMG7 143 aa9.36□□□□□ -0.91
SMPD4-209ENST00000439886 GLRXP35754 106 aa9.36□□□□□ -0.91
SMPD4-209ENST00000439886 TTC32Q5I0X7 151 aa9.36□□□□□ -0.91
SMPD4-209ENST00000439886 LINC01545Q5VT33 79 aa9.36□□□□□ -0.91
SMPD4-209ENST00000439886 PMS2CLQ68D20 193 aa9.36□□□□□ -0.91
SMPD4-209ENST00000439886 OR5AN1Q8NGI8 311 aa9.36□□□□□ -0.91
SMPD4-209ENST00000439886 PTH2Q96A98 100 aa9.36□□□□□ -0.91
SMPD4-209ENST00000439886 FMC1Q96HJ9 113 aa9.36□□□□□ -0.91
SMPD4-209ENST00000439886 TTC28Q96AY4 2481 aa9.36□□□□□ -0.91
SMPD4-209ENST00000439886 IGHV3OR16-8A0A075B7F1 116 aa9.36□□□□□ -0.91
SMPD4-209ENST00000439886 IGHV1-18A0A0C4DH31 117 aa9.36□□□□□ -0.91
SMPD4-209ENST00000439886 FABP5P3A8MUU1 101 aa9.36□□□□□ -0.91
SMPD4-209ENST00000439886 NTN3O00634 580 aaPredicted RBP9.36□□□□□ -0.91
SMPD4-209ENST00000439886 GTSCR1Q86UQ5 136 aa9.36□□□□□ -0.91
SMPD4-209ENST00000439886 CCL17Q92583 94 aa9.36□□□□□ -0.91
SMPD4-209ENST00000439886 IFI27L1Q96BM0 104 aa9.36□□□□□ -0.91
SMPD4-209ENST00000439886 C17orf77Q96MU5 243 aa9.36□□□□□ -0.91
SMPD4-209ENST00000439886 ZNF714Q96N38 554 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms