RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 PSG3Q16557 428 aa8.65□□□□□ -1.02
HSPG2-206ENST00000439717 GCSAMLQ5JQS6 135 aa8.65□□□□□ -1.02
HSPG2-206ENST00000439717 FFAR4Q5NUL3 377 aa8.65□□□□□ -1.02
HSPG2-206ENST00000439717 C1QTNF4Q9BXJ3 329 aa8.65□□□□□ -1.02
HSPG2-206ENST00000439717 ZNF331Q9NQX6 463 aaPredicted RBP8.65□□□□□ -1.02
HSPG2-206ENST00000439717 DNAH7Q8WXX0 4024 aa8.65□□□□□ -1.03
HSPG2-206ENST00000439717 RNF222A6NCQ9 220 aa8.64□□□□□ -1.03
HSPG2-206ENST00000439717 H3BQ15 152 aa8.64□□□□□ -1.03
HSPG2-206ENST00000439717 ZNF253O75346 499 aa8.64□□□□□ -1.03
HSPG2-206ENST00000439717 DUSP14O95147 198 aaKnown RBP8.64□□□□□ -1.03
HSPG2-206ENST00000439717 GIG44P09565 113 aaPredicted RBP8.64□□□□□ -1.03
HSPG2-206ENST00000439717 HIST1H1EP10412 219 aaKnown RBP8.64□□□□□ -1.03
HSPG2-206ENST00000439717 C4BPBP20851 252 aa8.64□□□□□ -1.03
HSPG2-206ENST00000439717 GDF5OSQ5U4N7 250 aa8.64□□□□□ -1.03
HSPG2-206ENST00000439717 RNF182Q8N6D2 247 aa8.64□□□□□ -1.03
HSPG2-206ENST00000439717 ZNF738Q8NE65 137 aa8.64□□□□□ -1.03
HSPG2-206ENST00000439717 SAT2Q96F10 170 aaPredicted RBP8.64□□□□□ -1.03
HSPG2-206ENST00000439717 FUT9Q9Y231 359 aa8.64□□□□□ -1.03
HSPG2-206ENST00000439717 TENM3Q9P273 2699 aa8.64□□□□□ -1.03
HSPG2-206ENST00000439717 A8MTW9 85 aa8.63□□□□□ -1.03
HSPG2-206ENST00000439717 F6UB75 175 aa8.63□□□□□ -1.03
HSPG2-206ENST00000439717 DEFB1P60022 68 aa8.63□□□□□ -1.03
HSPG2-206ENST00000439717 RHOBP62745 196 aa8.63□□□□□ -1.03
HSPG2-206ENST00000439717 PDE6HQ13956 83 aa8.63□□□□□ -1.03
HSPG2-206ENST00000439717 ACOT6Q3I5F7 207 aaPredicted RBP8.63□□□□□ -1.03
HSPG2-206ENST00000439717 IGFL4Q6B9Z1 124 aa8.63□□□□□ -1.03
HSPG2-206ENST00000439717 MIR17HGQ75NE6 70 aa8.63□□□□□ -1.03
HSPG2-206ENST00000439717 OR4B1Q8NGF8 309 aa8.63□□□□□ -1.03
HSPG2-206ENST00000439717 FAM167A-AS1Q96KT0 104 aa8.63□□□□□ -1.03
HSPG2-206ENST00000439717 RARRES2Q99969 163 aa8.63□□□□□ -1.03
HSPG2-206ENST00000439717 PSMG3Q9BT73 122 aaPredicted RBP8.63□□□□□ -1.03
HSPG2-206ENST00000439717 SLC25A2Q9BXI2 301 aa8.63□□□□□ -1.03
HSPG2-206ENST00000439717 ZNF586Q9NXT0 402 aa8.63□□□□□ -1.03
HSPG2-206ENST00000439717 STAB2Q8WWQ8 2551 aa8.63□□□□□ -1.03
HSPG2-206ENST00000439717 TRBV19A0A075B6N1 114 aa8.62□□□□□ -1.03
HSPG2-206ENST00000439717 BORCS7-ASMTA0A0B4J1R7 106 aa8.62□□□□□ -1.03
HSPG2-206ENST00000439717 TAAR5O14804 337 aa8.62□□□□□ -1.03
HSPG2-206ENST00000439717 ARPC5O15511 151 aa8.62□□□□□ -1.03
HSPG2-206ENST00000439717 SNRPCP09234 159 aaKnown RBP8.62□□□□□ -1.03
HSPG2-206ENST00000439717 M6PRP20645 277 aa8.62□□□□□ -1.03
HSPG2-206ENST00000439717 HLA-DMBP28068 263 aa8.62□□□□□ -1.03
HSPG2-206ENST00000439717 TAS2R45P59539 299 aa8.62□□□□□ -1.03
HSPG2-206ENST00000439717 PSG9Q00887 426 aa8.62□□□□□ -1.03
HSPG2-206ENST00000439717 Q6ZNX1 250 aa8.62□□□□□ -1.03
HSPG2-206ENST00000439717 HSD17B11Q8NBQ5 300 aa8.62□□□□□ -1.03
HSPG2-206ENST00000439717 CSNK1G2-AS1Q8NCQ2 148 aa8.62□□□□□ -1.03
HSPG2-206ENST00000439717 OR2G3Q8NGZ4 309 aa8.62□□□□□ -1.03
HSPG2-206ENST00000439717 OR11H2Q8NH07 326 aa8.62□□□□□ -1.03
HSPG2-206ENST00000439717 MUC7Q8TAX7 377 aa8.62□□□□□ -1.03
HSPG2-206ENST00000439717 RPUSD4Q96CM3 377 aaKnown RBP8.62□□□□□ -1.03
HSPG2-206ENST00000439717 OR51M1Q9H341 326 aa8.62□□□□□ -1.03
HSPG2-206ENST00000439717 HMSDA8MTL9 139 aa8.61□□□□□ -1.03
HSPG2-206ENST00000439717 C3orf84H3BNL1 204 aa8.61□□□□□ -1.03
HSPG2-206ENST00000439717 SMLR1H3BR10 107 aa8.61□□□□□ -1.03
HSPG2-206ENST00000439717 H3BTX0 84 aa8.61□□□□□ -1.03
HSPG2-206ENST00000439717 SLC17A3O00476 420 aa8.61□□□□□ -1.03
HSPG2-206ENST00000439717 JTBO76095 146 aa8.61□□□□□ -1.03
HSPG2-206ENST00000439717 IGKV3-20P01619 116 aa8.61□□□□□ -1.03
HSPG2-206ENST00000439717 MBP02144 154 aa8.61□□□□□ -1.03
HSPG2-206ENST00000439717 PYYP10082 97 aa8.61□□□□□ -1.03
HSPG2-206ENST00000439717 ATP6V0CP27449 155 aa8.61□□□□□ -1.03
HSPG2-206ENST00000439717 CNN1P51911 297 aaKnown RBP8.61□□□□□ -1.03
HSPG2-206ENST00000439717 SERF2P84101 59 aa8.61□□□□□ -1.03
HSPG2-206ENST00000439717 KHDC3LQ587J8 217 aa8.61□□□□□ -1.03
HSPG2-206ENST00000439717 OR8A1Q8NGG7 326 aa8.61□□□□□ -1.03
HSPG2-206ENST00000439717 IL17DQ8TAD2 202 aa8.61□□□□□ -1.03
HSPG2-206ENST00000439717 GNPNAT1Q96EK6 184 aaPredicted RBP8.61□□□□□ -1.03
HSPG2-206ENST00000439717 MRPL53Q96EL3 112 aaKnown RBP8.61□□□□□ -1.03
HSPG2-206ENST00000439717 PAXXQ9BUH6 204 aa8.61□□□□□ -1.03
HSPG2-206ENST00000439717 MFFQ9GZY8 342 aa8.61□□□□□ -1.03
HSPG2-206ENST00000439717 PRELID1Q9Y255 219 aa8.61□□□□□ -1.03
HSPG2-206ENST00000439717 AGRNO00468 2067 aa8.6□□□□□ -1.03
HSPG2-206ENST00000439717 A0A1W2PPV4 95 aa8.6□□□□□ -1.03
HSPG2-206ENST00000439717 ZNF705EA8MWA4 302 aaPredicted RBP8.6□□□□□ -1.03
HSPG2-206ENST00000439717 OR7C2O60412 319 aa8.6□□□□□ -1.03
HSPG2-206ENST00000439717 NDUFB4O95168 129 aa8.6□□□□□ -1.03
HSPG2-206ENST00000439717 AMBPP02760 352 aa8.6□□□□□ -1.03
HSPG2-206ENST00000439717 NBEAP1P0C6P0 100 aa8.6□□□□□ -1.03
HSPG2-206ENST00000439717 ZNF345Q14585 488 aa8.6□□□□□ -1.03
HSPG2-206ENST00000439717 RPL7L1Q6DKI1 246 aaKnown RBP8.6□□□□□ -1.03
HSPG2-206ENST00000439717 AMTNQ6UX39 209 aa8.6□□□□□ -1.03
HSPG2-206ENST00000439717 OR10G4Q8NGN3 311 aa8.6□□□□□ -1.03
HSPG2-206ENST00000439717 OR10G9Q8NGN4 311 aa8.6□□□□□ -1.03
HSPG2-206ENST00000439717 OR10G7Q8NGN6 311 aa8.6□□□□□ -1.03
HSPG2-206ENST00000439717 RNF141Q8WVD5 230 aa8.6□□□□□ -1.03
HSPG2-206ENST00000439717 FXYD5Q96DB9 178 aa8.6□□□□□ -1.03
HSPG2-206ENST00000439717 XCL2Q9UBD3 114 aa8.6□□□□□ -1.03
HSPG2-206ENST00000439717 RFNGQ9Y644 331 aa8.6□□□□□ -1.03
HSPG2-206ENST00000439717 A0A0J9YWU9 116 aa8.59□□□□□ -1.03
HSPG2-206ENST00000439717 MIFP14174 115 aa8.59□□□□□ -1.03
HSPG2-206ENST00000439717 RAB2AP61019 212 aa8.59□□□□□ -1.03
HSPG2-206ENST00000439717 HIST1H1AQ02539 215 aaPredicted RBP8.59□□□□□ -1.03
HSPG2-206ENST00000439717 KCNRGQ8N5I3 272 aa8.59□□□□□ -1.03
HSPG2-206ENST00000439717 OR10J6PQ8NGY7 276 aa8.59□□□□□ -1.03
HSPG2-206ENST00000439717 BLNKQ8WV28 456 aa8.59□□□□□ -1.03
HSPG2-206ENST00000439717 SLC35B3Q9H1N7 401 aa8.59□□□□□ -1.03
HSPG2-206ENST00000439717 C11orf68Q9H3H3 251 aaKnown RBP8.59□□□□□ -1.03
HSPG2-206ENST00000439717 AAMDCQ9H7C9 122 aa8.59□□□□□ -1.03
HSPG2-206ENST00000439717 A0A0D9SG52 128 aa8.58□□□□□ -1.04
HSPG2-206ENST00000439717 ZNF705FA8MVS1 300 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms