RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 RHOBP62745 196 aa7.6□□□□□ -1.19
MCF2L-216ENST00000439475 Q8NAQ8 132 aa7.6□□□□□ -1.19
MCF2L-216ENST00000439475 SCGB1C1Q8TD33 95 aa7.6□□□□□ -1.19
MCF2L-216ENST00000439475 PHLDA1Q8WV24 401 aaPredicted RBP7.6□□□□□ -1.19
MCF2L-216ENST00000439475 C20orf173Q96LM9 149 aa7.6□□□□□ -1.19
MCF2L-216ENST00000439475 NEU1Q99519 415 aa7.6□□□□□ -1.19
MCF2L-216ENST00000439475 MED28Q9H204 178 aa7.6□□□□□ -1.19
MCF2L-216ENST00000439475 HRH4Q9H3N8 390 aa7.6□□□□□ -1.19
MCF2L-216ENST00000439475 X6R8D5 127 aa7.6□□□□□ -1.19
MCF2L-216ENST00000439475 IGHV3OR16-12A0A075B7B8 117 aa7.59□□□□□ -1.19
MCF2L-216ENST00000439475 TRAV8-2A0A0B4J237 113 aa7.59□□□□□ -1.19
MCF2L-216ENST00000439475 TMEM189A5PLL7 270 aa7.59□□□□□ -1.19
MCF2L-216ENST00000439475 C11orf94C9JXX5 98 aa7.59□□□□□ -1.19
MCF2L-216ENST00000439475 MRPS12O15235 138 aaKnown RBP7.59□□□□□ -1.19
MCF2L-216ENST00000439475 DEFB4AO15263 64 aa7.59□□□□□ -1.19
MCF2L-216ENST00000439475 IFNA5P01569 189 aa7.59□□□□□ -1.19
MCF2L-216ENST00000439475 RPL12P30050 165 aaKnown RBP7.59□□□□□ -1.19
MCF2L-216ENST00000439475 CNN1P51911 297 aaKnown RBP7.59□□□□□ -1.19
MCF2L-216ENST00000439475 CLINT1Q14677 625 aa7.59□□□□□ -1.19
MCF2L-216ENST00000439475 IGFL4Q6B9Z1 124 aa7.59□□□□□ -1.19
MCF2L-216ENST00000439475 RNF182Q8N6D2 247 aa7.59□□□□□ -1.19
MCF2L-216ENST00000439475 C17orf77Q96MU5 243 aa7.59□□□□□ -1.19
MCF2L-216ENST00000439475 TMEM208Q9BTX3 173 aa7.59□□□□□ -1.19
MCF2L-216ENST00000439475 RNF126Q9BV68 326 aa7.59□□□□□ -1.19
MCF2L-216ENST00000439475 NPCDR1Q9BY65 106 aa7.59□□□□□ -1.19
MCF2L-216ENST00000439475 WDR61Q9GZS3 305 aaKnown RBP7.59□□□□□ -1.19
MCF2L-216ENST00000439475 SLC35B3Q9H1N7 401 aa7.59□□□□□ -1.19
MCF2L-216ENST00000439475 ZNF331Q9NQX6 463 aaPredicted RBP7.59□□□□□ -1.19
MCF2L-216ENST00000439475 HSPB11Q9Y547 144 aa7.59□□□□□ -1.19
MCF2L-216ENST00000439475 ALG5Q9Y673 324 aa7.59□□□□□ -1.19
MCF2L-216ENST00000439475 A8MTW9 85 aa7.58□□□□□ -1.2
MCF2L-216ENST00000439475 HBE1P02100 147 aa7.58□□□□□ -1.2
MCF2L-216ENST00000439475 RBMY1A1P0DJD3 496 aaKnown RBP7.58□□□□□ -1.2
MCF2L-216ENST00000439475 RBMY1CP0DJD4 496 aa7.58□□□□□ -1.2
MCF2L-216ENST00000439475 NANOS2P60321 138 aaKnown RBP7.58□□□□□ -1.2
MCF2L-216ENST00000439475 HIST1H1AQ02539 215 aaPredicted RBP7.58□□□□□ -1.2
MCF2L-216ENST00000439475 RBMY1FQ15415 496 aaKnown RBP7.58□□□□□ -1.2
MCF2L-216ENST00000439475 ZNF705AQ6ZN79 300 aaPredicted RBP7.58□□□□□ -1.2
MCF2L-216ENST00000439475 OR8A1Q8NGG7 326 aa7.58□□□□□ -1.2
MCF2L-216ENST00000439475 RPUSD4Q96CM3 377 aaKnown RBP7.58□□□□□ -1.2
MCF2L-216ENST00000439475 IGF2BP2-AS1Q96M15 143 aa7.58□□□□□ -1.2
MCF2L-216ENST00000439475 ATP5SQ99766 215 aa7.58□□□□□ -1.2
MCF2L-216ENST00000439475 TRAV5A0A0B4J249 113 aa7.57□□□□□ -1.2
MCF2L-216ENST00000439475 ZNF253O75346 499 aa7.57□□□□□ -1.2
MCF2L-216ENST00000439475 HIST1H1EP10412 219 aaKnown RBP7.57□□□□□ -1.2
MCF2L-216ENST00000439475 TCTAP57738 103 aa7.57□□□□□ -1.2
MCF2L-216ENST00000439475 RRN3P1Q2M238 152 aa7.57□□□□□ -1.2
MCF2L-216ENST00000439475 OR11H7Q8NGC8 314 aa7.57□□□□□ -1.2
MCF2L-216ENST00000439475 OR10J6PQ8NGY7 276 aa7.57□□□□□ -1.2
MCF2L-216ENST00000439475 MRPL32Q9BYC8 188 aaKnown RBP7.57□□□□□ -1.2
MCF2L-216ENST00000439475 TMEM14CQ9P0S9 112 aa7.57□□□□□ -1.2
MCF2L-216ENST00000439475 MBD2Q9UBB5 411 aa7.57□□□□□ -1.2
MCF2L-216ENST00000439475 PRELID1Q9Y255 219 aa7.57□□□□□ -1.2
MCF2L-216ENST00000439475 TIMM9Q9Y5J7 89 aa7.57□□□□□ -1.2
MCF2L-216ENST00000439475 RFNGQ9Y644 331 aa7.57□□□□□ -1.2
MCF2L-216ENST00000439475 STAB2Q8WWQ8 2551 aa7.57□□□□□ -1.2
MCF2L-216ENST00000439475 TEX48A0A1B0GUV7 120 aa7.56□□□□□ -1.2
MCF2L-216ENST00000439475 ZNF705FA8MVS1 300 aaPredicted RBP7.56□□□□□ -1.2
MCF2L-216ENST00000439475 INSP01308 110 aa7.56□□□□□ -1.2
MCF2L-216ENST00000439475 SNRPCP09234 159 aaKnown RBP7.56□□□□□ -1.2
MCF2L-216ENST00000439475 ZNF705DP0CH99 300 aaPredicted RBP7.56□□□□□ -1.2
MCF2L-216ENST00000439475 ZNF705BP0CI00 300 aaPredicted RBP7.56□□□□□ -1.2
MCF2L-216ENST00000439475 SPART-AS1P0CW21 52 aa7.56□□□□□ -1.2
MCF2L-216ENST00000439475 IGLC2P0DOY2 106 aa7.56□□□□□ -1.2
MCF2L-216ENST00000439475 HLA-DMBP28068 263 aa7.56□□□□□ -1.2
MCF2L-216ENST00000439475 TSPOP30536 169 aa7.56□□□□□ -1.2
MCF2L-216ENST00000439475 SPINK13Q1W4C9 94 aa7.56□□□□□ -1.2
MCF2L-216ENST00000439475 RGS21Q2M5E4 152 aa7.56□□□□□ -1.2
MCF2L-216ENST00000439475 MORN5Q5VZ52 161 aa7.56□□□□□ -1.2
MCF2L-216ENST00000439475 C2CD4CQ8TF44 421 aa7.56□□□□□ -1.2
MCF2L-216ENST00000439475 ASB13Q8WXK3 278 aa7.56□□□□□ -1.2
MCF2L-216ENST00000439475 SAT2Q96F10 170 aaPredicted RBP7.56□□□□□ -1.2
MCF2L-216ENST00000439475 AAMDCQ9H7C9 122 aa7.56□□□□□ -1.2
MCF2L-216ENST00000439475 TENM3Q9P273 2699 aa7.56□□□□□ -1.2
MCF2L-216ENST00000439475 TRAV10A0A0B4J240 114 aa7.55□□□□□ -1.2
MCF2L-216ENST00000439475 H3BQ15 152 aa7.55□□□□□ -1.2
MCF2L-216ENST00000439475 BOLA2-SMG1P6H3BVE0 249 aa7.55□□□□□ -1.2
MCF2L-216ENST00000439475 CDKN1BP46527 198 aa7.55□□□□□ -1.2
MCF2L-216ENST00000439475 PDE6HQ13956 83 aa7.55□□□□□ -1.2
MCF2L-216ENST00000439475 FCN2Q15485 313 aa7.55□□□□□ -1.2
MCF2L-216ENST00000439475 AMTNQ6UX39 209 aa7.55□□□□□ -1.2
MCF2L-216ENST00000439475 C1orf158Q8N1D5 194 aa7.55□□□□□ -1.2
MCF2L-216ENST00000439475 TMEM256Q8N2U0 113 aa7.55□□□□□ -1.2
MCF2L-216ENST00000439475 MRPL53Q96EL3 112 aaKnown RBP7.55□□□□□ -1.2
MCF2L-216ENST00000439475 PARD6GQ9BYG4 376 aaPredicted RBP7.55□□□□□ -1.2
MCF2L-216ENST00000439475 SMIM3Q9BZL3 60 aa7.55□□□□□ -1.2
MCF2L-216ENST00000439475 OR51M1Q9H341 326 aa7.55□□□□□ -1.2
MCF2L-216ENST00000439475 ZNF586Q9NXT0 402 aa7.55□□□□□ -1.2
MCF2L-216ENST00000439475 TRBV19A0A075B6N1 114 aa7.54□□□□□ -1.2
MCF2L-216ENST00000439475 H3BTX0 84 aa7.54□□□□□ -1.2
MCF2L-216ENST00000439475 LY6G6CO95867 125 aa7.54□□□□□ -1.2
MCF2L-216ENST00000439475 EMP1P54849 157 aa7.54□□□□□ -1.2
MCF2L-216ENST00000439475 TAS2R45P59539 299 aa7.54□□□□□ -1.2
MCF2L-216ENST00000439475 ZNF266Q14584 549 aa7.54□□□□□ -1.2
MCF2L-216ENST00000439475 FFAR4Q5NUL3 377 aa7.54□□□□□ -1.2
MCF2L-216ENST00000439475 BLNKQ8WV28 456 aa7.54□□□□□ -1.2
MCF2L-216ENST00000439475 LINC01587Q99440 93 aa7.54□□□□□ -1.2
MCF2L-216ENST00000439475 C20orf144Q9BQM9 153 aa7.54□□□□□ -1.2
MCF2L-216ENST00000439475 PAXXQ9BUH6 204 aa7.54□□□□□ -1.2
MCF2L-216ENST00000439475 FUT9Q9Y231 359 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms