RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 CCL21O00585 134 aa7.97□□□□□ -1.13
CDC42SE1-202ENST00000439374 CD3EP07766 207 aa7.97□□□□□ -1.13
CDC42SE1-202ENST00000439374 SUB1P53999 127 aaKnown RBP eCLIP7.97□□□□□ -1.13
CDC42SE1-202ENST00000439374 ZNF329Q86UD4 541 aa7.97□□□□□ -1.13
CDC42SE1-202ENST00000439374 RNASE6Q93091 150 aaKnown RBP7.97□□□□□ -1.13
CDC42SE1-202ENST00000439374 MYO18BQ8IUG5 2567 aa7.96□□□□□ -1.13
CDC42SE1-202ENST00000439374 IGHV3-66A0A0C4DH42 116 aa7.96□□□□□ -1.13
CDC42SE1-202ENST00000439374 A0A0G2JLM5 398 aa7.96□□□□□ -1.13
CDC42SE1-202ENST00000439374 AMN1Q8IY45 258 aa7.96□□□□□ -1.13
CDC42SE1-202ENST00000439374 TMEM75Q8N9X5 138 aa7.96□□□□□ -1.13
CDC42SE1-202ENST00000439374 OR4C13Q8NGP0 309 aa7.96□□□□□ -1.13
CDC42SE1-202ENST00000439374 Q8TAT8 98 aa7.96□□□□□ -1.13
CDC42SE1-202ENST00000439374 Q9H3A6 140 aa7.96□□□□□ -1.13
CDC42SE1-202ENST00000439374 PTPRBP23467 1997 aa7.96□□□□□ -1.14
CDC42SE1-202ENST00000439374 TNRC6BQ9UPQ9 1833 aaKnown RBP7.96□□□□□ -1.14
CDC42SE1-202ENST00000439374 PRCDQ00LT1 54 aa7.96□□□□□ -1.14
CDC42SE1-202ENST00000439374 WT1-ASQ06250 92 aa7.96□□□□□ -1.14
CDC42SE1-202ENST00000439374 RBPJQ06330 500 aa7.96□□□□□ -1.14
CDC42SE1-202ENST00000439374 IGFL2Q6UWQ7 119 aa7.96□□□□□ -1.14
CDC42SE1-202ENST00000439374 OR2K2Q8NGT1 345 aa7.96□□□□□ -1.14
CDC42SE1-202ENST00000439374 TXNDC17Q9BRA2 123 aa7.96□□□□□ -1.14
CDC42SE1-202ENST00000439374 TMEM14BQ9NUH8 114 aa7.96□□□□□ -1.14
CDC42SE1-202ENST00000439374 EPDR1Q9UM22 224 aa7.96□□□□□ -1.14
CDC42SE1-202ENST00000439374 CD69Q07108 199 aa7.95□□□□□ -1.14
CDC42SE1-202ENST00000439374 C3orf36Q3SXR2 165 aa7.95□□□□□ -1.14
CDC42SE1-202ENST00000439374 PATE2Q6UY27 113 aa7.95□□□□□ -1.14
CDC42SE1-202ENST00000439374 CTSZQ9UBR2 303 aa7.95□□□□□ -1.14
CDC42SE1-202ENST00000439374 ZNF257Q9Y2Q1 563 aa7.95□□□□□ -1.14
CDC42SE1-202ENST00000439374 LINC00312Q9Y6C7 94 aa7.95□□□□□ -1.14
CDC42SE1-202ENST00000439374 D6R8Y8 96 aa7.95□□□□□ -1.14
CDC42SE1-202ENST00000439374 E7EQL1 145 aa7.95□□□□□ -1.14
CDC42SE1-202ENST00000439374 TOMM40O96008 361 aa7.95□□□□□ -1.14
CDC42SE1-202ENST00000439374 LHBP01229 141 aa7.95□□□□□ -1.14
CDC42SE1-202ENST00000439374 RNASE2P10153 161 aaKnown RBP7.95□□□□□ -1.14
CDC42SE1-202ENST00000439374 SLC25A48Q6ZT89 311 aaKnown RBP7.95□□□□□ -1.14
CDC42SE1-202ENST00000439374 C5orf17Q8NAS9 161 aa7.95□□□□□ -1.14
CDC42SE1-202ENST00000439374 FOXA2Q9Y261 457 aaPredicted RBP7.95□□□□□ -1.14
CDC42SE1-202ENST00000439374 IGLV3-9A0A075B6K5 115 aa7.95□□□□□ -1.14
CDC42SE1-202ENST00000439374 TMEM178BH3BS89 294 aa7.95□□□□□ -1.14
CDC42SE1-202ENST00000439374 RPL27AP46776 148 aaKnown RBP7.95□□□□□ -1.14
CDC42SE1-202ENST00000439374 TCF15Q12870 199 aa7.95□□□□□ -1.14
CDC42SE1-202ENST00000439374 PSG3Q16557 428 aa7.95□□□□□ -1.14
CDC42SE1-202ENST00000439374 SH2D6Q7Z4S9 175 aa7.95□□□□□ -1.14
CDC42SE1-202ENST00000439374 C11orf52Q96A22 123 aa7.95□□□□□ -1.14
CDC42SE1-202ENST00000439374 CLUHP3Q96NS8 147 aa7.95□□□□□ -1.14
CDC42SE1-202ENST00000439374 PPIAL4CA0A0B4J2A2 164 aa7.94□□□□□ -1.14
CDC42SE1-202ENST00000439374 DLL1O00548 723 aa7.94□□□□□ -1.14
CDC42SE1-202ENST00000439374 PPIAL4GP0DN37 164 aa7.94□□□□□ -1.14
CDC42SE1-202ENST00000439374 ESDP10768 282 aa7.94□□□□□ -1.14
CDC42SE1-202ENST00000439374 KLRD1Q13241 179 aa7.94□□□□□ -1.14
CDC42SE1-202ENST00000439374 MBD6Q96DN6 1003 aa7.94□□□□□ -1.14
CDC42SE1-202ENST00000439374 IGF2BP2-AS1Q96M15 143 aa7.94□□□□□ -1.14
CDC42SE1-202ENST00000439374 HSPB8Q9UJY1 196 aa7.94□□□□□ -1.14
CDC42SE1-202ENST00000439374 LIPFP07098 398 aa7.94□□□□□ -1.14
CDC42SE1-202ENST00000439374 THBDP07204 575 aa7.94□□□□□ -1.14
CDC42SE1-202ENST00000439374 SAMD13Q5VXD3 122 aa7.94□□□□□ -1.14
CDC42SE1-202ENST00000439374 GTSCR1Q86UQ5 136 aa7.94□□□□□ -1.14
CDC42SE1-202ENST00000439374 DEFB125Q8N687 156 aa7.94□□□□□ -1.14
CDC42SE1-202ENST00000439374 DDB2Q92466 427 aa7.94□□□□□ -1.14
CDC42SE1-202ENST00000439374 GPR82Q96P67 336 aa7.94□□□□□ -1.14
CDC42SE1-202ENST00000439374 DKK2Q9UBU2 259 aa7.94□□□□□ -1.14
CDC42SE1-202ENST00000439374 TEX48A0A1B0GUV7 120 aa7.94□□□□□ -1.14
CDC42SE1-202ENST00000439374 PRSS46E5RG02 174 aa7.94□□□□□ -1.14
CDC42SE1-202ENST00000439374 TMEM186Q96B77 213 aa7.94□□□□□ -1.14
CDC42SE1-202ENST00000439374 TMEM160Q9NX00 188 aa7.94□□□□□ -1.14
CDC42SE1-202ENST00000439374 IGKV3-7A0A075B6H7 116 aa7.93□□□□□ -1.14
CDC42SE1-202ENST00000439374 A1L4Q6 167 aa7.93□□□□□ -1.14
CDC42SE1-202ENST00000439374 CSN1S1P47710 185 aa7.93□□□□□ -1.14
CDC42SE1-202ENST00000439374 TWIST1Q15672 202 aa7.93□□□□□ -1.14
CDC42SE1-202ENST00000439374 ETDBQ3ZM63 59 aa7.93□□□□□ -1.14
CDC42SE1-202ENST00000439374 ASCL5Q7RTU5 278 aa7.93□□□□□ -1.14
CDC42SE1-202ENST00000439374 FAM167A-AS1Q96KT0 104 aa7.93□□□□□ -1.14
CDC42SE1-202ENST00000439374 ST20Q9HBF5 79 aa7.93□□□□□ -1.14
CDC42SE1-202ENST00000439374 IGHV3OR16-10A0A075B7F0 116 aa7.93□□□□□ -1.14
CDC42SE1-202ENST00000439374 A0A1W2PPI3 338 aa7.93□□□□□ -1.14
CDC42SE1-202ENST00000439374 ORM1P02763 201 aa7.93□□□□□ -1.14
CDC42SE1-202ENST00000439374 UFC1Q9Y3C8 167 aa7.93□□□□□ -1.14
CDC42SE1-202ENST00000439374 WNK1Q9H4A3 2382 aa7.93□□□□□ -1.14
CDC42SE1-202ENST00000439374 FCGR2BP31994 310 aaPredicted RBP7.93□□□□□ -1.14
CDC42SE1-202ENST00000439374 HIST1H1AQ02539 215 aaPredicted RBP7.93□□□□□ -1.14
CDC42SE1-202ENST00000439374 SCGB2A2Q13296 93 aa7.93□□□□□ -1.14
CDC42SE1-202ENST00000439374 PRSS33Q8NF86 280 aa7.93□□□□□ -1.14
CDC42SE1-202ENST00000439374 C8orf49Q96NF6 230 aa7.93□□□□□ -1.14
CDC42SE1-202ENST00000439374 USP9XQ93008 2570 aaPredicted RBP7.92□□□□□ -1.14
CDC42SE1-202ENST00000439374 TRAV9-1A0A075B6T8 112 aa7.92□□□□□ -1.14
CDC42SE1-202ENST00000439374 CT45A10P0DMU9 189 aa7.92□□□□□ -1.14
CDC42SE1-202ENST00000439374 GATA1P15976 413 aaPredicted RBP7.92□□□□□ -1.14
CDC42SE1-202ENST00000439374 CKS2P33552 79 aa7.92□□□□□ -1.14
CDC42SE1-202ENST00000439374 RHOGP84095 191 aa7.92□□□□□ -1.14
CDC42SE1-202ENST00000439374 RBPMS2Q6ZRY4 209 aaKnown RBP7.92□□□□□ -1.14
CDC42SE1-202ENST00000439374 OSR1Q8TAX0 266 aaPredicted RBP7.92□□□□□ -1.14
CDC42SE1-202ENST00000439374 MRPL27Q9P0M9 148 aaKnown RBP7.92□□□□□ -1.14
CDC42SE1-202ENST00000439374 RAXQ9Y2V3 346 aa7.92□□□□□ -1.14
CDC42SE1-202ENST00000439374 FABP2P12104 132 aa7.92□□□□□ -1.14
CDC42SE1-202ENST00000439374 FAM120AOSQ5T036 256 aa7.92□□□□□ -1.14
CDC42SE1-202ENST00000439374 TSSC4Q9Y5U2 329 aaPredicted RBP7.92□□□□□ -1.14
CDC42SE1-202ENST00000439374 MYO9AB2RTY4 2548 aa7.92□□□□□ -1.14
CDC42SE1-202ENST00000439374 CCDC168Q8NDH2 2452 aa7.92□□□□□ -1.14
CDC42SE1-202ENST00000439374 A6NDN8 102 aa7.91□□□□□ -1.14
CDC42SE1-202ENST00000439374 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms