RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 A0A1W2PRM7 423 aa12.12□□□□□ -0.47
APP-208ENST00000439274 FCGR2BP31994 310 aaPredicted RBP12.12□□□□□ -0.47
APP-208ENST00000439274 MPV17L2Q567V2 206 aa12.12□□□□□ -0.47
APP-208ENST00000439274 C8orf49Q96NF6 230 aa12.12□□□□□ -0.47
APP-208ENST00000439274 C1RLQ9NZP8 487 aa12.12□□□□□ -0.47
APP-208ENST00000439274 LIPFP07098 398 aa12.11□□□□□ -0.47
APP-208ENST00000439274 TMEM75Q8N9X5 138 aa12.11□□□□□ -0.47
APP-208ENST00000439274 RNF125Q96EQ8 232 aa12.11□□□□□ -0.47
APP-208ENST00000439274 ST20Q9HBF5 79 aa12.11□□□□□ -0.47
APP-208ENST00000439274 GRNP28799 593 aaKnown RBP12.11□□□□□ -0.47
APP-208ENST00000439274 NEU4Q8WWR8 484 aaPredicted RBP12.11□□□□□ -0.47
APP-208ENST00000439274 MAP1LC3CQ9BXW4 147 aa12.11□□□□□ -0.47
APP-208ENST00000439274 PSG3Q16557 428 aa12.1□□□□□ -0.47
APP-208ENST00000439274 ZNF738Q8NE65 137 aa12.1□□□□□ -0.47
APP-208ENST00000439274 TMEM191AQ9H0A3 160 aa12.1□□□□□ -0.47
APP-208ENST00000439274 TMSB15BA0A087X1C1 80 aa12.1□□□□□ -0.47
APP-208ENST00000439274 MRPS12O15235 138 aaKnown RBP12.1□□□□□ -0.47
APP-208ENST00000439274 ARF6P62330 175 aa12.1□□□□□ -0.47
APP-208ENST00000439274 KLRD1Q13241 179 aa12.1□□□□□ -0.47
APP-208ENST00000439274 ZNF414Q96IQ9 312 aa12.1□□□□□ -0.47
APP-208ENST00000439274 TRBV6-1A0A0K0K1D8 114 aa12.09□□□□□ -0.47
APP-208ENST00000439274 OR5AL1P0C617 328 aa12.09□□□□□ -0.47
APP-208ENST00000439274 FAM106CPP0CH98 169 aa12.09□□□□□ -0.47
APP-208ENST00000439274 RIGQ13278 110 aa12.09□□□□□ -0.47
APP-208ENST00000439274 ZNF672Q499Z4 452 aaPredicted RBP12.09□□□□□ -0.47
APP-208ENST00000439274 FAM106AQ4KMX7 169 aa12.09□□□□□ -0.47
APP-208ENST00000439274 MUC21A0A0G2JKD1 596 aa12.08□□□□□ -0.48
APP-208ENST00000439274 MUC21A0A140T8X8 626 aa12.08□□□□□ -0.48
APP-208ENST00000439274 NBR2O15453 112 aa12.08□□□□□ -0.48
APP-208ENST00000439274 MUC21Q5SSG8 566 aa12.08□□□□□ -0.48
APP-208ENST00000439274 PPP1R14DQ9NXH3 145 aa12.08□□□□□ -0.48
APP-208ENST00000439274 ANKHD1Q8IWZ3 2542 aaKnown RBP12.08□□□□□ -0.48
APP-208ENST00000439274 FAM90A27PA6NNH2 459 aa12.08□□□□□ -0.48
APP-208ENST00000439274 NCR2O95944 276 aa12.08□□□□□ -0.48
APP-208ENST00000439274 NUDT3O95989 172 aa12.08□□□□□ -0.48
APP-208ENST00000439274 IGHV3-23P01764 117 aa12.08□□□□□ -0.48
APP-208ENST00000439274 UBE2V1Q13404 147 aa12.08□□□□□ -0.48
APP-208ENST00000439274 SLC25A34Q6PIV7 304 aa12.08□□□□□ -0.48
APP-208ENST00000439274 PET117Q6UWS5 81 aa12.08□□□□□ -0.48
APP-208ENST00000439274 SCRT2Q9NQ03 307 aa12.08□□□□□ -0.48
APP-208ENST00000439274 AP5S1Q9NUS5 200 aa12.08□□□□□ -0.48
APP-208ENST00000439274 RAXQ9Y2V3 346 aa12.08□□□□□ -0.48
APP-208ENST00000439274 HSBP1L1C9JCN9 74 aa12.07□□□□□ -0.48
APP-208ENST00000439274 K7EQM0 130 aa12.07□□□□□ -0.48
APP-208ENST00000439274 SFTPCP11686 197 aa12.07□□□□□ -0.48
APP-208ENST00000439274 FOXE3Q13461 319 aa12.07□□□□□ -0.48
APP-208ENST00000439274 HES1Q14469 280 aa12.07□□□□□ -0.48
APP-208ENST00000439274 RNF5Q99942 180 aa12.07□□□□□ -0.48
APP-208ENST00000439274 HSPB8Q9UJY1 196 aa12.07□□□□□ -0.48
APP-208ENST00000439274 SERTM2A0A1B0GWG4 89 aa12.07□□□□□ -0.48
APP-208ENST00000439274 GNG7O60262 68 aa12.07□□□□□ -0.48
APP-208ENST00000439274 LOXL1Q08397 574 aaPredicted RBP12.07□□□□□ -0.48
APP-208ENST00000439274 CFHR4Q92496 578 aa12.07□□□□□ -0.48
APP-208ENST00000439274 LOC389332A0A1B0GUA5 103 aa12.06□□□□□ -0.48
APP-208ENST00000439274 WI2-2373I1.2A0A1W2PRP0 233 aa12.06□□□□□ -0.48
APP-208ENST00000439274 TMEM213A2RRL7 107 aa12.06□□□□□ -0.48
APP-208ENST00000439274 PRSS3P2Q8NHM4 247 aa12.06□□□□□ -0.48
APP-208ENST00000439274 SRSF8Q9BRL6 282 aaKnown RBP12.06□□□□□ -0.48
APP-208ENST00000439274 IFI27P40305 119 aaPredicted RBP12.06□□□□□ -0.48
APP-208ENST00000439274 BVES-AS1Q5T3Y7 98 aa12.06□□□□□ -0.48
APP-208ENST00000439274 RNASE8Q8TDE3 154 aaKnown RBP12.06□□□□□ -0.48
APP-208ENST00000439274 FANCD2OSQ96PS1 177 aa12.06□□□□□ -0.48
APP-208ENST00000439274 DPM3Q9P2X0 92 aa12.06□□□□□ -0.48
APP-208ENST00000439274 IGKV2-40A0A087WW87 121 aaPredicted RBP12.05□□□□□ -0.48
APP-208ENST00000439274 IGKV2D-40P01614 121 aaPredicted RBP12.05□□□□□ -0.48
APP-208ENST00000439274 RELQ04864 619 aaPredicted RBP12.05□□□□□ -0.48
APP-208ENST00000439274 LYZL1Q6UWQ5 148 aa12.05□□□□□ -0.48
APP-208ENST00000439274 FA2HQ7L5A8 372 aa12.05□□□□□ -0.48
APP-208ENST00000439274 LYPD1Q8N2G4 141 aa12.05□□□□□ -0.48
APP-208ENST00000439274 ZNF747Q9BV97 191 aa12.05□□□□□ -0.48
APP-208ENST00000439274 RNF24Q9Y225 148 aa12.05□□□□□ -0.48
APP-208ENST00000439274 LOC105371242A0A075B767 164 aa12.05□□□□□ -0.48
APP-208ENST00000439274 A0A087X0K7 114 aa12.05□□□□□ -0.48
APP-208ENST00000439274 D6R8Y8 96 aa12.05□□□□□ -0.48
APP-208ENST00000439274 SNAI2O43623 268 aa12.05□□□□□ -0.48
APP-208ENST00000439274 FXYD7P58549 80 aa12.05□□□□□ -0.48
APP-208ENST00000439274 NDPQ00604 133 aa12.05□□□□□ -0.48
APP-208ENST00000439274 LINC01545Q5VT33 79 aa12.05□□□□□ -0.48
APP-208ENST00000439274 LY6G5BQ8NDX9 201 aa12.05□□□□□ -0.48
APP-208ENST00000439274 SPTA1P02549 2419 aa12.05□□□□□ -0.48
APP-208ENST00000439274 F8W735 103 aaPredicted RBP12.04□□□□□ -0.48
APP-208ENST00000439274 CT45A10P0DMU9 189 aa12.04□□□□□ -0.48
APP-208ENST00000439274 IGFL4Q6B9Z1 124 aa12.04□□□□□ -0.48
APP-208ENST00000439274 AMN1Q8IY45 258 aa12.04□□□□□ -0.48
APP-208ENST00000439274 GATD1Q8NB37 220 aa12.04□□□□□ -0.48
APP-208ENST00000439274 TAX1BP3O14907 124 aa12.04□□□□□ -0.48
APP-208ENST00000439274 SH2D1AO60880 128 aa12.04□□□□□ -0.48
APP-208ENST00000439274 VAMP3Q15836 100 aa12.04□□□□□ -0.48
APP-208ENST00000439274 C21orf62-AS1Q17RA5 79 aa12.04□□□□□ -0.48
APP-208ENST00000439274 AAMDCQ9H7C9 122 aa12.04□□□□□ -0.48
APP-208ENST00000439274 CBY1Q9Y3M2 126 aa12.04□□□□□ -0.48
APP-208ENST00000439274 PTPRQQ9UMZ3 2332 aa12.04□□□□□ -0.48
APP-208ENST00000439274 HRNRQ86YZ3 2850 aaPredicted RBP12.04□□□□□ -0.48
APP-208ENST00000439274 NBASA2RRP1 2371 aa12.04□□□□□ -0.48
APP-208ENST00000439274 ASH1LQ9NR48 2969 aaKnown RBP12.03□□□□□ -0.48
APP-208ENST00000439274 IGLV11-55A0A075B6I3 123 aa12.03□□□□□ -0.48
APP-208ENST00000439274 IGHV3OR16-8A0A075B7F1 116 aa12.03□□□□□ -0.48
APP-208ENST00000439274 A0A096LNJ9 63 aa12.03□□□□□ -0.48
APP-208ENST00000439274 NDUFA3O95167 84 aa12.03□□□□□ -0.48
APP-208ENST00000439274 C5orf64Q2M2E5 130 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms