RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 LRRK2Q5S007 2527 aa9.29□□□□□ -0.92
TRAPPC9-202ENST00000438773 IGHV2-70DA0A0C4DH43 119 aa9.29□□□□□ -0.92
TRAPPC9-202ENST00000438773 SLC25A16P16260 332 aa9.29□□□□□ -0.92
TRAPPC9-202ENST00000438773 ID1P41134 155 aa9.29□□□□□ -0.92
TRAPPC9-202ENST00000438773 MAPK1IP1LQ8NDC0 245 aa9.29□□□□□ -0.92
TRAPPC9-202ENST00000438773 OR10J6PQ8NGY7 276 aa9.29□□□□□ -0.92
TRAPPC9-202ENST00000438773 FNDC10F2Z333 226 aa9.28□□□□□ -0.92
TRAPPC9-202ENST00000438773 CKS2P33552 79 aa9.28□□□□□ -0.92
TRAPPC9-202ENST00000438773 ZNF562Q6V9R5 426 aa9.28□□□□□ -0.92
TRAPPC9-202ENST00000438773 GPR82Q96P67 336 aa9.28□□□□□ -0.92
TRAPPC9-202ENST00000438773 TMEM70Q9BUB7 260 aa9.28□□□□□ -0.92
TRAPPC9-202ENST00000438773 HSPB8Q9UJY1 196 aa9.28□□□□□ -0.92
TRAPPC9-202ENST00000438773 DSCAMO60469 2012 aa9.28□□□□□ -0.92
TRAPPC9-202ENST00000438773 NDUFS8O00217 210 aa9.28□□□□□ -0.92
TRAPPC9-202ENST00000438773 SRSF9Q13242 221 aaKnown RBP eCLIP9.28□□□□□ -0.92
TRAPPC9-202ENST00000438773 DNLZQ5SXM8 178 aa9.28□□□□□ -0.92
TRAPPC9-202ENST00000438773 FNDC4Q9H6D8 234 aaPredicted RBP9.28□□□□□ -0.92
TRAPPC9-202ENST00000438773 EPDR1Q9UM22 224 aa9.28□□□□□ -0.92
TRAPPC9-202ENST00000438773 LOC107984156A0A0G2JMH3 177 aa9.28□□□□□ -0.92
TRAPPC9-202ENST00000438773 C7orf71A4D174 169 aa9.28□□□□□ -0.92
TRAPPC9-202ENST00000438773 JMJD1CQ15652 2540 aa9.28□□□□□ -0.92
TRAPPC9-202ENST00000438773 RUSC1-AS1Q66K80 236 aa9.28□□□□□ -0.92
TRAPPC9-202ENST00000438773 ARL17AQ8IVW1 177 aa9.28□□□□□ -0.92
TRAPPC9-202ENST00000438773 ZNF502Q8TBZ5 544 aa9.28□□□□□ -0.92
TRAPPC9-202ENST00000438773 PYGO2Q9BRQ0 406 aa9.28□□□□□ -0.92
TRAPPC9-202ENST00000438773 LOC400499M0QZD8 3231 aa9.28□□□□□ -0.92
TRAPPC9-202ENST00000438773 USP9XQ93008 2570 aaPredicted RBP9.28□□□□□ -0.92
TRAPPC9-202ENST00000438773 TRAV41A0A0B4J266 112 aa9.28□□□□□ -0.92
TRAPPC9-202ENST00000438773 MSMBP08118 114 aa9.28□□□□□ -0.92
TRAPPC9-202ENST00000438773 TDRG1Q3Y452 100 aa9.28□□□□□ -0.92
TRAPPC9-202ENST00000438773 ACTL10Q5JWF8 245 aa9.28□□□□□ -0.92
TRAPPC9-202ENST00000438773 DSPP15924 2871 aaKnown RBP9.27□□□□□ -0.92
TRAPPC9-202ENST00000438773 C19orf35Q6ZS72 473 aa9.27□□□□□ -0.93
TRAPPC9-202ENST00000438773 ZNF114Q8NC26 417 aa9.27□□□□□ -0.93
TRAPPC9-202ENST00000438773 NACAE9PAV3 2078 aa9.27□□□□□ -0.93
TRAPPC9-202ENST00000438773 DSCAML1Q8TD84 2053 aa9.27□□□□□ -0.93
TRAPPC9-202ENST00000438773 TRAV8-6A0A0B4J262 113 aa9.27□□□□□ -0.93
TRAPPC9-202ENST00000438773 PMS2P5A8MQ11 134 aa9.27□□□□□ -0.93
TRAPPC9-202ENST00000438773 ZNF843Q8N446 348 aa9.27□□□□□ -0.93
TRAPPC9-202ENST00000438773 POLR3KQ9Y2Y1 108 aaPredicted RBP9.27□□□□□ -0.93
TRAPPC9-202ENST00000438773 A6NDN8 102 aa9.27□□□□□ -0.93
TRAPPC9-202ENST00000438773 SPANXN1Q5VSR9 72 aa9.27□□□□□ -0.93
TRAPPC9-202ENST00000438773 C12orf54Q6X4T0 127 aa9.27□□□□□ -0.93
TRAPPC9-202ENST00000438773 SLC25A39Q9BZJ4 359 aaPredicted RBP9.27□□□□□ -0.93
TRAPPC9-202ENST00000438773 hDV102S1A0JD36 115 aa9.26□□□□□ -0.93
TRAPPC9-202ENST00000438773 PROP1O75360 226 aa9.26□□□□□ -0.93
TRAPPC9-202ENST00000438773 CR1LQ2VPA4 569 aa9.26□□□□□ -0.93
TRAPPC9-202ENST00000438773 RNF223E7ERA6 249 aa9.26□□□□□ -0.93
TRAPPC9-202ENST00000438773 ZNF324O75467 553 aaPredicted RBP9.26□□□□□ -0.93
TRAPPC9-202ENST00000438773 MGPP08493 103 aa9.26□□□□□ -0.93
TRAPPC9-202ENST00000438773 SAPCD1Q5SSQ6 148 aa9.26□□□□□ -0.93
TRAPPC9-202ENST00000438773 C1orf194Q5T5A4 169 aa9.26□□□□□ -0.93
TRAPPC9-202ENST00000438773 IGFBPL1Q8WX77 278 aa9.26□□□□□ -0.93
TRAPPC9-202ENST00000438773 DDB2Q92466 427 aa9.26□□□□□ -0.93
TRAPPC9-202ENST00000438773 NPFFR1Q9GZQ6 430 aa9.26□□□□□ -0.93
TRAPPC9-202ENST00000438773 MEGF9Q9H1U4 602 aa9.26□□□□□ -0.93
TRAPPC9-202ENST00000438773 OTORQ9NRC9 128 aa9.26□□□□□ -0.93
TRAPPC9-202ENST00000438773 AP5S1Q9NUS5 200 aa9.26□□□□□ -0.93
TRAPPC9-202ENST00000438773 SORL1Q92673 2214 aa9.26□□□□□ -0.93
TRAPPC9-202ENST00000438773 H3BUT2 72 aa9.26□□□□□ -0.93
TRAPPC9-202ENST00000438773 CIDEAO60543 219 aa9.26□□□□□ -0.93
TRAPPC9-202ENST00000438773 APOHP02749 345 aaPredicted RBP9.26□□□□□ -0.93
TRAPPC9-202ENST00000438773 TMEM97Q5BJF2 176 aa9.26□□□□□ -0.93
TRAPPC9-202ENST00000438773 PPIFP30405 207 aaKnown RBP9.25□□□□□ -0.93
TRAPPC9-202ENST00000438773 COA6Q5JTJ3 125 aaKnown RBP9.25□□□□□ -0.93
TRAPPC9-202ENST00000438773 C8orf31Q8N9H6 132 aa9.25□□□□□ -0.93
TRAPPC9-202ENST00000438773 C3orf79P0CE67 100 aa9.25□□□□□ -0.93
TRAPPC9-202ENST00000438773 CGB3P0DN86 165 aa9.25□□□□□ -0.93
TRAPPC9-202ENST00000438773 CGB7P0DN87 165 aa9.25□□□□□ -0.93
TRAPPC9-202ENST00000438773 UTF1Q5T230 341 aa9.25□□□□□ -0.93
TRAPPC9-202ENST00000438773 AMMECR1LQ6DCA0 310 aa9.25□□□□□ -0.93
TRAPPC9-202ENST00000438773 NIT1Q86X76 327 aa9.25□□□□□ -0.93
TRAPPC9-202ENST00000438773 Q96MF0 132 aa9.25□□□□□ -0.93
TRAPPC9-202ENST00000438773 DUX5Q96PT3 197 aa9.25□□□□□ -0.93
TRAPPC9-202ENST00000438773 MPV17L2Q567V2 206 aa9.25□□□□□ -0.93
TRAPPC9-202ENST00000438773 EBLN2Q6P2I7 272 aa9.25□□□□□ -0.93
TRAPPC9-202ENST00000438773 TMEM136Q6ZRR5 245 aa9.25□□□□□ -0.93
TRAPPC9-202ENST00000438773 RBPMS2Q6ZRY4 209 aaKnown RBP9.25□□□□□ -0.93
TRAPPC9-202ENST00000438773 EXOC3-AS1Q8N2X6 119 aa9.25□□□□□ -0.93
TRAPPC9-202ENST00000438773 PRSS22Q9GZN4 317 aa9.25□□□□□ -0.93
TRAPPC9-202ENST00000438773 F2Z2F3 143 aa9.24□□□□□ -0.93
TRAPPC9-202ENST00000438773 TYMSP04818 313 aa9.24□□□□□ -0.93
TRAPPC9-202ENST00000438773 SRD5A1P18405 259 aa9.24□□□□□ -0.93
TRAPPC9-202ENST00000438773 FMC1Q96HJ9 113 aa9.24□□□□□ -0.93
TRAPPC9-202ENST00000438773 SRSF8Q9BRL6 282 aaKnown RBP9.24□□□□□ -0.93
TRAPPC9-202ENST00000438773 TRAV8-1A0A0A6YYK1 113 aa9.24□□□□□ -0.93
TRAPPC9-202ENST00000438773 IGHV1-69DA0A0B4J2H0 117 aa9.24□□□□□ -0.93
TRAPPC9-202ENST00000438773 IGHV1-69P01742 117 aa9.24□□□□□ -0.93
TRAPPC9-202ENST00000438773 RPL15P61313 204 aaKnown RBP9.24□□□□□ -0.93
TRAPPC9-202ENST00000438773 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.24□□□□□ -0.93
TRAPPC9-202ENST00000438773 ARHGAP32A7KAX9 2087 aa9.24□□□□□ -0.93
TRAPPC9-202ENST00000438773 DCHS1Q96JQ0 3298 aa9.24□□□□□ -0.93
TRAPPC9-202ENST00000438773 PSMB2P49721 201 aa9.24□□□□□ -0.93
TRAPPC9-202ENST00000438773 HBBP68871 147 aa9.24□□□□□ -0.93
TRAPPC9-202ENST00000438773 HIST1H1AQ02539 215 aaPredicted RBP9.24□□□□□ -0.93
TRAPPC9-202ENST00000438773 FBLN7Q53RD9 439 aa9.24□□□□□ -0.93
TRAPPC9-202ENST00000438773 FRMD6-AS1P0C7T7 363 aa9.23□□□□□ -0.93
TRAPPC9-202ENST00000438773 PAX8Q06710 450 aa9.23□□□□□ -0.93
TRAPPC9-202ENST00000438773 ZFP30Q9Y2G7 519 aa9.23□□□□□ -0.93
TRAPPC9-202ENST00000438773 A0A087X0K7 114 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms