RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 C1orf158Q8N1D5 194 aa5.51□□□□□ -1.53
VPS50-204ENST00000438395 RNF182Q8N6D2 247 aa5.51□□□□□ -1.53
VPS50-204ENST00000438395 LRTM2Q8N967 370 aa5.51□□□□□ -1.53
VPS50-204ENST00000438395 DEDD2Q8WXF8 326 aa5.51□□□□□ -1.53
VPS50-204ENST00000438395 MGAT4CQ9UBM8 478 aa5.51□□□□□ -1.53
VPS50-204ENST00000438395 DNAH6Q9C0G6 4158 aa5.51□□□□□ -1.53
VPS50-204ENST00000438395 IGKV1OR2-108A0A075B7D4 117 aa5.5□□□□□ -1.53
VPS50-204ENST00000438395 ZNF705GA8MUZ8 300 aaPredicted RBP5.5□□□□□ -1.53
VPS50-204ENST00000438395 F5H768 121 aa5.5□□□□□ -1.53
VPS50-204ENST00000438395 H3BMQ9 156 aa5.5□□□□□ -1.53
VPS50-204ENST00000438395 SSSCA1O60232 199 aa5.5□□□□□ -1.53
VPS50-204ENST00000438395 SFT2D2O95562 160 aa5.5□□□□□ -1.53
VPS50-204ENST00000438395 NUDT3O95989 172 aa5.5□□□□□ -1.53
VPS50-204ENST00000438395 ATP5G1P05496 136 aa5.5□□□□□ -1.53
VPS50-204ENST00000438395 LINC00869P0C866 280 aa5.5□□□□□ -1.53
VPS50-204ENST00000438395 HTN1P15515 57 aa5.5□□□□□ -1.53
VPS50-204ENST00000438395 ANXA7P20073 488 aaKnown RBP5.5□□□□□ -1.53
VPS50-204ENST00000438395 GATA2P23769 480 aaPredicted RBP5.5□□□□□ -1.53
VPS50-204ENST00000438395 ATP5G3P48201 142 aa5.5□□□□□ -1.53
VPS50-204ENST00000438395 CCL18P55774 89 aa5.5□□□□□ -1.53
VPS50-204ENST00000438395 UBE2MP61081 183 aaKnown RBP5.5□□□□□ -1.53
VPS50-204ENST00000438395 SPANXN2Q5MJ10 180 aa5.5□□□□□ -1.53
VPS50-204ENST00000438395 TEPPQ6URK8 271 aa5.5□□□□□ -1.53
VPS50-204ENST00000438395 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.5□□□□□ -1.53
VPS50-204ENST00000438395 CYP2G1PQ6ZSU1 146 aa5.5□□□□□ -1.53
VPS50-204ENST00000438395 TMEM144Q7Z5S9 345 aa5.5□□□□□ -1.53
VPS50-204ENST00000438395 TMEM256Q8N2U0 113 aa5.5□□□□□ -1.53
VPS50-204ENST00000438395 OR11H7Q8NGC8 314 aa5.5□□□□□ -1.53
VPS50-204ENST00000438395 TRIM63Q969Q1 353 aa5.5□□□□□ -1.53
VPS50-204ENST00000438395 LINC01587Q99440 93 aa5.5□□□□□ -1.53
VPS50-204ENST00000438395 SHANK2-AS3Q9BTD1 123 aa5.5□□□□□ -1.53
VPS50-204ENST00000438395 SLIRPQ9GZT3 109 aaKnown RBP5.5□□□□□ -1.53
VPS50-204ENST00000438395 CDIP1Q9H305 208 aa5.5□□□□□ -1.53
VPS50-204ENST00000438395 PKHD1P08F94 4074 aa5.49□□□□□ -1.53
VPS50-204ENST00000438395 H3BRN7 92 aa5.49□□□□□ -1.53
VPS50-204ENST00000438395 ADAP1O75689 374 aa5.49□□□□□ -1.53
VPS50-204ENST00000438395 SCGB1D2O95969 90 aa5.49□□□□□ -1.53
VPS50-204ENST00000438395 TSPOP30536 169 aa5.49□□□□□ -1.53
VPS50-204ENST00000438395 RRAS2P62070 204 aaPredicted RBP5.49□□□□□ -1.53
VPS50-204ENST00000438395 C4orf46Q504U0 113 aa5.49□□□□□ -1.53
VPS50-204ENST00000438395 TRIQKQ629K1 86 aa5.49□□□□□ -1.53
VPS50-204ENST00000438395 IGFL4Q6B9Z1 124 aa5.49□□□□□ -1.53
VPS50-204ENST00000438395 AMTNQ6UX39 209 aa5.49□□□□□ -1.53
VPS50-204ENST00000438395 Q6ZR54 194 aa5.49□□□□□ -1.53
VPS50-204ENST00000438395 OR8A1Q8NGG7 326 aa5.49□□□□□ -1.53
VPS50-204ENST00000438395 OR10J6PQ8NGY7 276 aa5.49□□□□□ -1.53
VPS50-204ENST00000438395 C8orf49Q96NF6 230 aa5.49□□□□□ -1.53
VPS50-204ENST00000438395 SLC25A39Q9BZJ4 359 aaPredicted RBP5.49□□□□□ -1.53
VPS50-204ENST00000438395 PSENENQ9NZ42 101 aa5.49□□□□□ -1.53
VPS50-204ENST00000438395 TRAV12-2A0A075B6T6 113 aa5.48□□□□□ -1.53
VPS50-204ENST00000438395 A8MTW9 85 aa5.48□□□□□ -1.53
VPS50-204ENST00000438395 C16orf90A8MZG2 172 aa5.48□□□□□ -1.53
VPS50-204ENST00000438395 GOSR2O14653 212 aa5.48□□□□□ -1.53
VPS50-204ENST00000438395 TAS2R60P59551 318 aa5.48□□□□□ -1.53
VPS50-204ENST00000438395 POLR2GP62487 172 aaKnown RBP eCLIP5.48□□□□□ -1.53
VPS50-204ENST00000438395 DLK1P80370 383 aa5.48□□□□□ -1.53
VPS50-204ENST00000438395 TTC32Q5I0X7 151 aa5.48□□□□□ -1.53
VPS50-204ENST00000438395 LCN15Q6UWW0 184 aa5.48□□□□□ -1.53
VPS50-204ENST00000438395 ZNF546Q86UE3 836 aa5.48□□□□□ -1.53
VPS50-204ENST00000438395 CCDC28AQ8IWP9 274 aa5.48□□□□□ -1.53
VPS50-204ENST00000438395 OR10P1Q8NGE3 313 aa5.48□□□□□ -1.53
VPS50-204ENST00000438395 RPUSD4Q96CM3 377 aaKnown RBP5.48□□□□□ -1.53
VPS50-204ENST00000438395 C16orf74Q96GX8 76 aa5.48□□□□□ -1.53
VPS50-204ENST00000438395 UHRF2Q96PU4 802 aa5.48□□□□□ -1.53
VPS50-204ENST00000438395 SOSTQ9BQB4 213 aa5.48□□□□□ -1.53
VPS50-204ENST00000438395 KRTAP3-1Q9BYR8 98 aa5.48□□□□□ -1.53
VPS50-204ENST00000438395 ARL6Q9H0F7 186 aa5.48□□□□□ -1.53
VPS50-204ENST00000438395 TIMM8BQ9Y5J9 83 aaPredicted RBP5.48□□□□□ -1.53
VPS50-204ENST00000438395 V9GYH0 126 aa5.48□□□□□ -1.53
VPS50-204ENST00000438395 TRAV8-2A0A0B4J237 113 aa5.47□□□□□ -1.53
VPS50-204ENST00000438395 C9orf170A2RU37 121 aa5.47□□□□□ -1.53
VPS50-204ENST00000438395 CBY3A6NI87 242 aa5.47□□□□□ -1.53
VPS50-204ENST00000438395 CENPXA8MT69 81 aa5.47□□□□□ -1.53
VPS50-204ENST00000438395 PRSS46E5RG02 174 aa5.47□□□□□ -1.53
VPS50-204ENST00000438395 COX7A2P2O60397 106 aa5.47□□□□□ -1.53
VPS50-204ENST00000438395 METTL15P1P0C7V9 234 aa5.47□□□□□ -1.53
VPS50-204ENST00000438395 CXCL3P19876 107 aa5.47□□□□□ -1.53
VPS50-204ENST00000438395 CDKN1BP46527 198 aa5.47□□□□□ -1.53
VPS50-204ENST00000438395 RAB31Q13636 194 aa5.47□□□□□ -1.53
VPS50-204ENST00000438395 ZNF846Q147U1 533 aa5.47□□□□□ -1.53
VPS50-204ENST00000438395 PSG3Q16557 428 aa5.47□□□□□ -1.53
VPS50-204ENST00000438395 IAH1Q2TAA2 248 aaPredicted RBP5.47□□□□□ -1.53
VPS50-204ENST00000438395 PXDC1Q5TGL8 231 aa5.47□□□□□ -1.53
VPS50-204ENST00000438395 ZNF493Q6ZR52 646 aa5.47□□□□□ -1.53
VPS50-204ENST00000438395 CCDC190Q86UF4 302 aa5.47□□□□□ -1.53
VPS50-204ENST00000438395 ZNF575Q86XF7 245 aa5.47□□□□□ -1.53
VPS50-204ENST00000438395 SLC50A1Q9BRV3 221 aa5.47□□□□□ -1.53
VPS50-204ENST00000438395 NPVFQ9HCQ7 196 aa5.47□□□□□ -1.53
VPS50-204ENST00000438395 A0A087X0K7 114 aa5.46□□□□□ -1.54
VPS50-204ENST00000438395 NBDYA0A0U1RRE5 68 aa5.46□□□□□ -1.54
VPS50-204ENST00000438395 LINC00854A0A1B0GVQ3 168 aa5.46□□□□□ -1.54
VPS50-204ENST00000438395 NAP1L6A6NFF2 107 aa5.46□□□□□ -1.54
VPS50-204ENST00000438395 SNURFLB1AK76 121 aa5.46□□□□□ -1.54
VPS50-204ENST00000438395 FNDC10F2Z333 226 aa5.46□□□□□ -1.54
VPS50-204ENST00000438395 H7BYZ3 331 aa5.46□□□□□ -1.54
VPS50-204ENST00000438395 L7N2F9 121 aa5.46□□□□□ -1.54
VPS50-204ENST00000438395 CRXO43186 299 aaPredicted RBP5.46□□□□□ -1.54
VPS50-204ENST00000438395 NDUFB6O95139 128 aa5.46□□□□□ -1.54
VPS50-204ENST00000438395 CXCL2P19875 107 aa5.46□□□□□ -1.54
VPS50-204ENST00000438395 VAMP2P63027 116 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms