RNA–Protein interactions for RNA: ENST00000436477.6

AC011840.1-202, humanhuman

TSL 2 BASIC

Gene AC011840.1, Length 1,351 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011840.1-202ENST00000436477 HLA-DMBP28068 263 aa13.13□□□□□ -0.31
AC011840.1-202ENST00000436477 C20orf173Q96LM9 149 aa13.13□□□□□ -0.31
AC011840.1-202ENST00000436477 FAM110AQ9BQ89 295 aa13.13□□□□□ -0.31
AC011840.1-202ENST00000436477 TRAV8-2A0A0B4J237 113 aa13.12□□□□□ -0.31
AC011840.1-202ENST00000436477 A8MZ25 164 aa13.12□□□□□ -0.31
AC011840.1-202ENST00000436477 SLC17A3O00476 420 aa13.12□□□□□ -0.31
AC011840.1-202ENST00000436477 ISLRO14498 428 aa13.12□□□□□ -0.31
AC011840.1-202ENST00000436477 OR7C2O60412 319 aa13.12□□□□□ -0.31
AC011840.1-202ENST00000436477 OR10J4P0C629 311 aa13.12□□□□□ -0.31
AC011840.1-202ENST00000436477 IGLC2P0DOY2 106 aa13.12□□□□□ -0.31
AC011840.1-202ENST00000436477 PSMB3P49720 205 aa13.12□□□□□ -0.31
AC011840.1-202ENST00000436477 NKX2-5P52952 324 aaPredicted RBP13.12□□□□□ -0.31
AC011840.1-202ENST00000436477 SERF2P84101 59 aa13.12□□□□□ -0.31
AC011840.1-202ENST00000436477 BLNKQ8WV28 456 aa13.12□□□□□ -0.31
AC011840.1-202ENST00000436477 OR51M1Q9H341 326 aa13.12□□□□□ -0.31
AC011840.1-202ENST00000436477 ZNF586Q9NXT0 402 aa13.12□□□□□ -0.31
AC011840.1-202ENST00000436477 CDC34P49427 236 aaPredicted RBP13.11□□□□□ -0.31
AC011840.1-202ENST00000436477 ACTL10Q5JWF8 245 aa13.11□□□□□ -0.31
AC011840.1-202ENST00000436477 SBSPONQ8IVN8 264 aa13.11□□□□□ -0.31
AC011840.1-202ENST00000436477 PAXXQ9BUH6 204 aa13.11□□□□□ -0.31
AC011840.1-202ENST00000436477 HRH4Q9H3N8 390 aa13.11□□□□□ -0.31
AC011840.1-202ENST00000436477 RPRMQ9NS64 109 aa13.11□□□□□ -0.31
AC011840.1-202ENST00000436477 TMEM14CQ9P0S9 112 aa13.11□□□□□ -0.31
AC011840.1-202ENST00000436477 LOC102724200A0A096LPH7 203 aaPredicted RBP13.1□□□□□ -0.31
AC011840.1-202ENST00000436477 TMEM41BQ5BJD5 291 aa13.1□□□□□ -0.31
AC011840.1-202ENST00000436477 LCN15Q6UWW0 184 aa13.1□□□□□ -0.31
AC011840.1-202ENST00000436477 C9orf62Q8N4C0 152 aa13.1□□□□□ -0.31
AC011840.1-202ENST00000436477 RPP25LQ8N5L8 163 aaKnown RBP13.1□□□□□ -0.31
AC011840.1-202ENST00000436477 ZNF503Q96F45 646 aa13.1□□□□□ -0.31
AC011840.1-202ENST00000436477 B9D2Q9BPU9 175 aa13.1□□□□□ -0.31
AC011840.1-202ENST00000436477 F6UB75 175 aa13.09□□□□□ -0.31
AC011840.1-202ENST00000436477 MBP02144 154 aa13.09□□□□□ -0.31
AC011840.1-202ENST00000436477 HIST1H1EP10412 219 aaKnown RBP13.09□□□□□ -0.31
AC011840.1-202ENST00000436477 SPP1P10451 314 aa13.09□□□□□ -0.31
AC011840.1-202ENST00000436477 TAS2R45P59539 299 aa13.09□□□□□ -0.31
AC011840.1-202ENST00000436477 KHDC3LQ587J8 217 aa13.09□□□□□ -0.31
AC011840.1-202ENST00000436477 AKR1C8PQ5T2L2 129 aa13.09□□□□□ -0.31
AC011840.1-202ENST00000436477 GDF5OSQ5U4N7 250 aa13.09□□□□□ -0.31
AC011840.1-202ENST00000436477 LINC00322Q6ZN03 302 aaPredicted RBP13.09□□□□□ -0.31
AC011840.1-202ENST00000436477 STHQ8IWL8 128 aa13.09□□□□□ -0.31
AC011840.1-202ENST00000436477 ZNF331Q9NQX6 463 aaPredicted RBP13.09□□□□□ -0.31
AC011840.1-202ENST00000436477 UBE2L3P68036 154 aaKnown RBP13.08□□□□□ -0.31
AC011840.1-202ENST00000436477 HAGHQ16775 308 aa13.08□□□□□ -0.31
AC011840.1-202ENST00000436477 SAMD13Q5VXD3 122 aa13.08□□□□□ -0.31
AC011840.1-202ENST00000436477 SSX7Q7RTT5 188 aa13.08□□□□□ -0.31
AC011840.1-202ENST00000436477 BAP18Q8IXM2 172 aa13.08□□□□□ -0.31
AC011840.1-202ENST00000436477 ZNF738Q8NE65 137 aa13.08□□□□□ -0.31
AC011840.1-202ENST00000436477 RNF141Q8WVD5 230 aa13.08□□□□□ -0.31
AC011840.1-202ENST00000436477 RAB24Q969Q5 203 aa13.08□□□□□ -0.31
AC011840.1-202ENST00000436477 SAT2Q96F10 170 aaPredicted RBP13.08□□□□□ -0.31
AC011840.1-202ENST00000436477 PLA2G2EQ9NZK7 142 aa13.08□□□□□ -0.31
AC011840.1-202ENST00000436477 DNAH9Q9NYC9 4486 aa13.08□□□□□ -0.32
AC011840.1-202ENST00000436477 IGKV3-20P01619 116 aa13.07□□□□□ -0.32
AC011840.1-202ENST00000436477 NBEAP1P0C6P0 100 aa13.07□□□□□ -0.32
AC011840.1-202ENST00000436477 TPT1P13693 172 aaKnown RBP13.07□□□□□ -0.32
AC011840.1-202ENST00000436477 EIF5AP63241 154 aaKnown RBP13.07□□□□□ -0.32
AC011840.1-202ENST00000436477 FXYD5Q96DB9 178 aa13.07□□□□□ -0.32
AC011840.1-202ENST00000436477 SLC50A1Q9BRV3 221 aa13.07□□□□□ -0.32
AC011840.1-202ENST00000436477 ACTR3CQ9C0K3 210 aaPredicted RBP13.07□□□□□ -0.32
AC011840.1-202ENST00000436477 TRBV19A0A075B6N1 114 aa13.07□□□□□ -0.32
AC011840.1-202ENST00000436477 ZNF705FA8MVS1 300 aaPredicted RBP13.07□□□□□ -0.32
AC011840.1-202ENST00000436477 NDUFB4O95168 129 aa13.07□□□□□ -0.32
AC011840.1-202ENST00000436477 ZNF705DP0CH99 300 aaPredicted RBP13.07□□□□□ -0.32
AC011840.1-202ENST00000436477 ZNF705BP0CI00 300 aaPredicted RBP13.07□□□□□ -0.32
AC011840.1-202ENST00000436477 PSG3Q16557 428 aa13.07□□□□□ -0.32
AC011840.1-202ENST00000436477 GUK1Q16774 197 aa13.07□□□□□ -0.32
AC011840.1-202ENST00000436477 TMED6Q8WW62 240 aa13.07□□□□□ -0.32
AC011840.1-202ENST00000436477 SEC11BP0C7V7 166 aa13.06□□□□□ -0.32
AC011840.1-202ENST00000436477 ARL14EPLP0DKL9 152 aa13.06□□□□□ -0.32
AC011840.1-202ENST00000436477 ZNF726P1Q15940 193 aa13.06□□□□□ -0.32
AC011840.1-202ENST00000436477 EXOC3-AS1Q8N2X6 119 aa13.06□□□□□ -0.32
AC011840.1-202ENST00000436477 PHYHIPLQ96FC7 376 aa13.06□□□□□ -0.32
AC011840.1-202ENST00000436477 SAV1Q9H4B6 383 aaPredicted RBP13.06□□□□□ -0.32
AC011840.1-202ENST00000436477 BOLA1Q9Y3E2 137 aa13.06□□□□□ -0.32
AC011840.1-202ENST00000436477 STAG3L2P0CL84 134 aa13.05□□□□□ -0.32
AC011840.1-202ENST00000436477 STAG3L3P0CL85 134 aa13.05□□□□□ -0.32
AC011840.1-202ENST00000436477 EBLN2Q6P2I7 272 aa13.05□□□□□ -0.32
AC011840.1-202ENST00000436477 PQLC2Q6ZP29 291 aa13.05□□□□□ -0.32
AC011840.1-202ENST00000436477 FOXI2Q6ZQN5 318 aa13.05□□□□□ -0.32
AC011840.1-202ENST00000436477 TRPT1Q86TN4 253 aaKnown RBP13.05□□□□□ -0.32
AC011840.1-202ENST00000436477 OR4B1Q8NGF8 309 aa13.05□□□□□ -0.32
AC011840.1-202ENST00000436477 STOML3Q8TAV4 291 aa13.05□□□□□ -0.32
AC011840.1-202ENST00000436477 RETNQ9HD89 108 aa13.05□□□□□ -0.32
AC011840.1-202ENST00000436477 H3BMM0 161 aa13.04□□□□□ -0.32
AC011840.1-202ENST00000436477 HLA-DRB4P13762 266 aa13.04□□□□□ -0.32
AC011840.1-202ENST00000436477 FHITP49789 147 aa13.04□□□□□ -0.32
AC011840.1-202ENST00000436477 FGF8P55075 233 aaPredicted RBP13.04□□□□□ -0.32
AC011840.1-202ENST00000436477 SLC51BQ86UW2 128 aa13.04□□□□□ -0.32
AC011840.1-202ENST00000436477 IQCF2Q8IXL9 164 aa13.04□□□□□ -0.32
AC011840.1-202ENST00000436477 RPUSD4Q96CM3 377 aaKnown RBP13.04□□□□□ -0.32
AC011840.1-202ENST00000436477 HLA-DRB4X5D2U9 266 aa13.04□□□□□ -0.32
AC011840.1-202ENST00000436477 A0A0J9YX75 114 aa13.03□□□□□ -0.32
AC011840.1-202ENST00000436477 CTXND1A0A1B0GTU2 59 aa13.03□□□□□ -0.32
AC011840.1-202ENST00000436477 PRAC2D3DTV9 90 aa13.03□□□□□ -0.32
AC011840.1-202ENST00000436477 M0R3E3 92 aa13.03□□□□□ -0.32
AC011840.1-202ENST00000436477 ZNF253O75346 499 aa13.03□□□□□ -0.32
AC011840.1-202ENST00000436477 C4BPBP20851 252 aa13.03□□□□□ -0.32
AC011840.1-202ENST00000436477 APOC4P55056 127 aa13.03□□□□□ -0.32
AC011840.1-202ENST00000436477 FXYD7P58549 80 aa13.03□□□□□ -0.32
AC011840.1-202ENST00000436477 RANP62826 216 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms