RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 IQCF2Q8IXL9 164 aa12.55□□□□□ -0.4
CALD1-209ENST00000436461 RNF141Q8WVD5 230 aa12.55□□□□□ -0.4
CALD1-209ENST00000436461 PHYHIPLQ96FC7 376 aa12.55□□□□□ -0.4
CALD1-209ENST00000436461 TMEM14CQ9P0S9 112 aa12.55□□□□□ -0.4
CALD1-209ENST00000436461 RNF24Q9Y225 148 aa12.55□□□□□ -0.4
CALD1-209ENST00000436461 NOTCH1P46531 2555 aa12.54□□□□□ -0.4
CALD1-209ENST00000436461 MAP1LC3B2A6NCE7 125 aa12.54□□□□□ -0.4
CALD1-209ENST00000436461 K7EQG2 157 aa12.54□□□□□ -0.4
CALD1-209ENST00000436461 SOCS3O14543 225 aa12.54□□□□□ -0.4
CALD1-209ENST00000436461 ZNF688P0C7X2 276 aa12.54□□□□□ -0.4
CALD1-209ENST00000436461 HLA-DMBP28068 263 aa12.54□□□□□ -0.4
CALD1-209ENST00000436461 MAP1LC3BQ9GZQ8 125 aa12.54□□□□□ -0.4
CALD1-209ENST00000436461 WFDC10AQ9H1F0 79 aa12.54□□□□□ -0.4
CALD1-209ENST00000436461 HRH4Q9H3N8 390 aa12.54□□□□□ -0.4
CALD1-209ENST00000436461 TMPRSS5Q9H3S3 457 aa12.54□□□□□ -0.4
CALD1-209ENST00000436461 A0A087X0K7 114 aa12.53□□□□□ -0.4
CALD1-209ENST00000436461 HIST1H1EP10412 219 aaKnown RBP12.53□□□□□ -0.4
CALD1-209ENST00000436461 ZNF124Q15973 351 aa12.53□□□□□ -0.4
CALD1-209ENST00000436461 TEX261Q6UWH6 196 aa12.53□□□□□ -0.4
CALD1-209ENST00000436461 RNF182Q8N6D2 247 aa12.53□□□□□ -0.4
CALD1-209ENST00000436461 NBEAL1Q6ZS30 2694 aa12.52□□□□□ -0.4
CALD1-209ENST00000436461 TRAV8-2A0A0B4J237 113 aa12.52□□□□□ -0.4
CALD1-209ENST00000436461 OR4C46A6NHA9 309 aa12.52□□□□□ -0.4
CALD1-209ENST00000436461 GCHFRP30047 84 aa12.52□□□□□ -0.4
CALD1-209ENST00000436461 DEFB1P60022 68 aa12.52□□□□□ -0.4
CALD1-209ENST00000436461 CD81P60033 236 aa12.52□□□□□ -0.4
CALD1-209ENST00000436461 PQLC2Q6ZP29 291 aa12.52□□□□□ -0.4
CALD1-209ENST00000436461 SFT2D1Q8WV19 159 aa12.52□□□□□ -0.4
CALD1-209ENST00000436461 PCNPQ8WW12 178 aaKnown RBP12.52□□□□□ -0.4
CALD1-209ENST00000436461 C16orf92Q96LL3 132 aa12.52□□□□□ -0.4
CALD1-209ENST00000436461 TRBV19A0A075B6N1 114 aa12.51□□□□□ -0.41
CALD1-209ENST00000436461 ZNF705EA8MWA4 302 aaPredicted RBP12.51□□□□□ -0.41
CALD1-209ENST00000436461 NDUFB4O95168 129 aa12.51□□□□□ -0.41
CALD1-209ENST00000436461 CXorf1O96002 111 aa12.51□□□□□ -0.41
CALD1-209ENST00000436461 NBEAP1P0C6P0 100 aa12.51□□□□□ -0.41
CALD1-209ENST00000436461 RAB5CP51148 216 aa12.51□□□□□ -0.41
CALD1-209ENST00000436461 ODF3L2Q3SX64 289 aa12.51□□□□□ -0.41
CALD1-209ENST00000436461 LRRC20Q8TCA0 184 aa12.51□□□□□ -0.41
CALD1-209ENST00000436461 SAT2Q96F10 170 aaPredicted RBP12.51□□□□□ -0.41
CALD1-209ENST00000436461 C20orf173Q96LM9 149 aa12.51□□□□□ -0.41
CALD1-209ENST00000436461 LINC00052Q96N35 136 aa12.51□□□□□ -0.41
CALD1-209ENST00000436461 H2AFB1P0C5Y9 115 aa12.51□□□□□ -0.41
CALD1-209ENST00000436461 DPPA3Q6W0C5 159 aa12.51□□□□□ -0.41
CALD1-209ENST00000436461 APRG1Q8IVJ8 170 aa12.51□□□□□ -0.41
CALD1-209ENST00000436461 ZNF680Q8NEM1 530 aa12.51□□□□□ -0.41
CALD1-209ENST00000436461 MAP6D1Q9H9H5 199 aa12.51□□□□□ -0.41
CALD1-209ENST00000436461 DEFB131AP59861 70 aa12.5□□□□□ -0.41
CALD1-209ENST00000436461 PSMG4Q5JS54 123 aa12.5□□□□□ -0.41
CALD1-209ENST00000436461 KPRPQ5T749 579 aaPredicted RBP12.5□□□□□ -0.41
CALD1-209ENST00000436461 EXOC3-AS1Q8N2X6 119 aa12.5□□□□□ -0.41
CALD1-209ENST00000436461 MBD3L1Q8WWY6 194 aa12.5□□□□□ -0.41
CALD1-209ENST00000436461 ZNF331Q9NQX6 463 aaPredicted RBP12.5□□□□□ -0.41
CALD1-209ENST00000436461 AGRNO00468 2067 aa12.5□□□□□ -0.41
CALD1-209ENST00000436461 TRAV2A0A0B4J234 112 aa12.49□□□□□ -0.41
CALD1-209ENST00000436461 MEOX2P50222 304 aa12.49□□□□□ -0.41
CALD1-209ENST00000436461 RANP62826 216 aaKnown RBP12.49□□□□□ -0.41
CALD1-209ENST00000436461 GTSCR1Q86UQ5 136 aa12.49□□□□□ -0.41
CALD1-209ENST00000436461 C19orf73Q9NVV2 129 aa12.49□□□□□ -0.41
CALD1-209ENST00000436461 ISLRO14498 428 aa12.48□□□□□ -0.41
CALD1-209ENST00000436461 UBE2G2P60604 165 aa12.48□□□□□ -0.41
CALD1-209ENST00000436461 CCL20P78556 96 aa12.48□□□□□ -0.41
CALD1-209ENST00000436461 IFITM2Q01629 132 aa12.48□□□□□ -0.41
CALD1-209ENST00000436461 GUK1Q16774 197 aa12.48□□□□□ -0.41
CALD1-209ENST00000436461 Q8N1Y9 231 aa12.48□□□□□ -0.41
CALD1-209ENST00000436461 AURKAIP1Q9NWT8 199 aaPredicted RBP12.48□□□□□ -0.41
CALD1-209ENST00000436461 ZNF705FA8MVS1 300 aaPredicted RBP12.48□□□□□ -0.41
CALD1-209ENST00000436461 M0R3E3 92 aa12.48□□□□□ -0.41
CALD1-209ENST00000436461 PSMB3P49720 205 aa12.48□□□□□ -0.41
CALD1-209ENST00000436461 DEFB125Q8N687 156 aa12.48□□□□□ -0.41
CALD1-209ENST00000436461 SLC50A1Q9BRV3 221 aa12.48□□□□□ -0.41
CALD1-209ENST00000436461 OR11H12B2RN74 326 aa12.47□□□□□ -0.41
CALD1-209ENST00000436461 F6UB75 175 aa12.47□□□□□ -0.41
CALD1-209ENST00000436461 ID1P41134 155 aa12.47□□□□□ -0.41
CALD1-209ENST00000436461 SNRPD3P62318 126 aaKnown RBP12.47□□□□□ -0.41
CALD1-209ENST00000436461 ICAM4Q14773 271 aa12.47□□□□□ -0.41
CALD1-209ENST00000436461 Q9H3A6 140 aa12.47□□□□□ -0.41
CALD1-209ENST00000436461 IFNA7P01567 189 aa12.46□□□□□ -0.41
CALD1-209ENST00000436461 PDE6HQ13956 83 aa12.46□□□□□ -0.41
CALD1-209ENST00000436461 GDF5OSQ5U4N7 250 aa12.46□□□□□ -0.41
CALD1-209ENST00000436461 SUN5Q8TC36 379 aa12.46□□□□□ -0.41
CALD1-209ENST00000436461 CITED4Q96RK1 184 aa12.46□□□□□ -0.41
CALD1-209ENST00000436461 TMEM167BQ9NRX6 74 aa12.46□□□□□ -0.41
CALD1-209ENST00000436461 KNCNA6PVL3 124 aa12.45□□□□□ -0.42
CALD1-209ENST00000436461 ZNF253O75346 499 aa12.45□□□□□ -0.42
CALD1-209ENST00000436461 ZNF705DP0CH99 300 aaPredicted RBP12.45□□□□□ -0.42
CALD1-209ENST00000436461 ZNF705BP0CI00 300 aaPredicted RBP12.45□□□□□ -0.42
CALD1-209ENST00000436461 ZNF738Q8NE65 137 aa12.45□□□□□ -0.42
CALD1-209ENST00000436461 ZMAT5Q9UDW3 170 aaKnown RBP12.45□□□□□ -0.42
CALD1-209ENST00000436461 YTHDF2Q9Y5A9 579 aaKnown RBP12.45□□□□□ -0.42
CALD1-209ENST00000436461 PRAC2D3DTV9 90 aa12.44□□□□□ -0.42
CALD1-209ENST00000436461 PSG9Q00887 426 aa12.44□□□□□ -0.42
CALD1-209ENST00000436461 PSG3Q16557 428 aa12.44□□□□□ -0.42
CALD1-209ENST00000436461 PGPA6NDG6 321 aa12.44□□□□□ -0.42
CALD1-209ENST00000436461 GGTLC3B5MD39 225 aa12.44□□□□□ -0.42
CALD1-209ENST00000436461 SAMD13Q5VXD3 122 aa12.44□□□□□ -0.42
CALD1-209ENST00000436461 AAMDCQ9H7C9 122 aa12.44□□□□□ -0.42
CALD1-209ENST00000436461 TRAV1-1A0A0B4J248 108 aa12.43□□□□□ -0.42
CALD1-209ENST00000436461 TEX46H3BTG2 121 aa12.43□□□□□ -0.42
CALD1-209ENST00000436461 K7EIL1 84 aa12.43□□□□□ -0.42
CALD1-209ENST00000436461 BLOC1S1P78537 153 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms