RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 H3BTX0 84 aa17.41■□□□□ 0.38
CPSF4-204ENST00000436336 CD5P06127 495 aa17.41■□□□□ 0.38
CPSF4-204ENST00000436336 TCF24Q7RTU0 167 aa17.41■□□□□ 0.38
CPSF4-204ENST00000436336 SLC7A5P1Q8MH63 180 aa17.41■□□□□ 0.38
CPSF4-204ENST00000436336 LINC00482Q8N8I6 264 aa17.41■□□□□ 0.38
CPSF4-204ENST00000436336 C17orf77Q96MU5 243 aa17.41■□□□□ 0.38
CPSF4-204ENST00000436336 TXNDC17Q9BRA2 123 aa17.41■□□□□ 0.38
CPSF4-204ENST00000436336 SIGLEC8Q9NYZ4 499 aa17.41■□□□□ 0.38
CPSF4-204ENST00000436336 MLXQ9UH92 298 aa17.41■□□□□ 0.38
CPSF4-204ENST00000436336 MEF2BQ02080 365 aaPredicted RBP17.41■□□□□ 0.38
CPSF4-204ENST00000436336 ICAM4Q14773 271 aa17.41■□□□□ 0.38
CPSF4-204ENST00000436336 PEA15Q15121 130 aa17.41■□□□□ 0.38
CPSF4-204ENST00000436336 CST9LP1Q5W188 147 aa17.41■□□□□ 0.38
CPSF4-204ENST00000436336 NKX6-2Q9C056 277 aaPredicted RBP17.41■□□□□ 0.38
CPSF4-204ENST00000436336 SMDT1Q9H4I9 107 aa17.41■□□□□ 0.38
CPSF4-204ENST00000436336 ZNF253O75346 499 aa17.4■□□□□ 0.38
CPSF4-204ENST00000436336 NDUFB4O95168 129 aa17.4■□□□□ 0.38
CPSF4-204ENST00000436336 RANP62826 216 aaKnown RBP17.4■□□□□ 0.38
CPSF4-204ENST00000436336 FAM90A2PQ658T7 463 aa17.4■□□□□ 0.38
CPSF4-204ENST00000436336 UQCC3Q6UW78 93 aa17.4■□□□□ 0.38
CPSF4-204ENST00000436336 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.4■□□□□ 0.38
CPSF4-204ENST00000436336 RXFP4Q8TDU9 374 aa17.4■□□□□ 0.38
CPSF4-204ENST00000436336 C11orf94C9JXX5 98 aa17.39■□□□□ 0.37
CPSF4-204ENST00000436336 RPL11P62913 178 aaKnown RBP17.39■□□□□ 0.37
CPSF4-204ENST00000436336 SRSF3P84103 164 aaKnown RBP17.39■□□□□ 0.37
CPSF4-204ENST00000436336 LYPD1Q8N2G4 141 aa17.39■□□□□ 0.37
CPSF4-204ENST00000436336 SLC17A3O00476 420 aa17.38■□□□□ 0.37
CPSF4-204ENST00000436336 ATP5G3P48201 142 aa17.38■□□□□ 0.37
CPSF4-204ENST00000436336 PSG9Q00887 426 aa17.38■□□□□ 0.37
CPSF4-204ENST00000436336 DYNLRB2Q8TF09 96 aa17.38■□□□□ 0.37
CPSF4-204ENST00000436336 SLC50A1Q9BRV3 221 aa17.38■□□□□ 0.37
CPSF4-204ENST00000436336 Q9H3A6 140 aa17.38■□□□□ 0.37
CPSF4-204ENST00000436336 NRN1Q9NPD7 142 aa17.38■□□□□ 0.37
CPSF4-204ENST00000436336 GGTLC3B5MD39 225 aa17.37■□□□□ 0.37
CPSF4-204ENST00000436336 CD81P60033 236 aa17.37■□□□□ 0.37
CPSF4-204ENST00000436336 SUMO1P63165 101 aaKnown RBP17.37■□□□□ 0.37
CPSF4-204ENST00000436336 TREM1Q9NP99 234 aa17.37■□□□□ 0.37
CPSF4-204ENST00000436336 SELENOKQ9Y6D0 94 aa17.37■□□□□ 0.37
CPSF4-204ENST00000436336 NDUFS6O75380 124 aaKnown RBP17.36■□□□□ 0.37
CPSF4-204ENST00000436336 CCDC28AQ8IWP9 274 aa17.36■□□□□ 0.37
CPSF4-204ENST00000436336 AAMDCQ9H7C9 122 aa17.36■□□□□ 0.37
CPSF4-204ENST00000436336 ZNF331Q9NQX6 463 aaPredicted RBP17.36■□□□□ 0.37
CPSF4-204ENST00000436336 OTORQ9NRC9 128 aa17.36■□□□□ 0.37
CPSF4-204ENST00000436336 CITED4Q96RK1 184 aa17.35■□□□□ 0.37
CPSF4-204ENST00000436336 PGPA6NDG6 321 aa17.35■□□□□ 0.37
CPSF4-204ENST00000436336 DEFB114Q30KQ6 69 aa17.35■□□□□ 0.37
CPSF4-204ENST00000436336 IGKV3-7A0A075B6H7 116 aa17.34■□□□□ 0.37
CPSF4-204ENST00000436336 PDE6DO43924 150 aa17.34■□□□□ 0.37
CPSF4-204ENST00000436336 SAMD13Q5VXD3 122 aa17.34■□□□□ 0.37
CPSF4-204ENST00000436336 EXOC3-AS1Q8N2X6 119 aa17.34■□□□□ 0.37
CPSF4-204ENST00000436336 C9JQL5 133 aa17.33■□□□□ 0.37
CPSF4-204ENST00000436336 SAP30O75446 220 aa17.33■□□□□ 0.37
CPSF4-204ENST00000436336 SRP19P09132 144 aaKnown RBP17.33■□□□□ 0.37
CPSF4-204ENST00000436336 C16orf92Q96LL3 132 aa17.33■□□□□ 0.37
CPSF4-204ENST00000436336 TCEAL7Q9BRU2 100 aa17.33■□□□□ 0.37
CPSF4-204ENST00000436336 MS4A6AQ9H2W1 248 aa17.33■□□□□ 0.37
CPSF4-204ENST00000436336 F6UZH7 168 aa17.33■□□□□ 0.36
CPSF4-204ENST00000436336 SOCS3O14543 225 aa17.33■□□□□ 0.36
CPSF4-204ENST00000436336 RBPMS2Q6ZRY4 209 aaKnown RBP17.33■□□□□ 0.36
CPSF4-204ENST00000436336 CLEC5AQ9NY25 188 aa17.33■□□□□ 0.36
CPSF4-204ENST00000436336 TMEM250H0YL14 139 aa17.32■□□□□ 0.36
CPSF4-204ENST00000436336 SLC25A5P05141 298 aaKnown RBP17.32■□□□□ 0.36
CPSF4-204ENST00000436336 PAFAH1B2P68402 229 aa17.32■□□□□ 0.36
CPSF4-204ENST00000436336 GBGT1Q8N5D6 347 aa17.32■□□□□ 0.36
CPSF4-204ENST00000436336 C5orf17Q8NAS9 161 aa17.32■□□□□ 0.36
CPSF4-204ENST00000436336 DCANP1Q8TF63 244 aa17.32■□□□□ 0.36
CPSF4-204ENST00000436336 SLC35B3Q9H1N7 401 aa17.32■□□□□ 0.36
CPSF4-204ENST00000436336 TRAV8-2A0A0B4J237 113 aa17.31■□□□□ 0.36
CPSF4-204ENST00000436336 TRAV25A0A0B4J276 109 aa17.31■□□□□ 0.36
CPSF4-204ENST00000436336 TSPAN4O14817 238 aa17.31■□□□□ 0.36
CPSF4-204ENST00000436336 CD300EQ496F6 205 aaPredicted RBP17.31■□□□□ 0.36
CPSF4-204ENST00000436336 TMEM61Q8N0U2 210 aa17.31■□□□□ 0.36
CPSF4-204ENST00000436336 CMTM2Q8TAZ6 248 aa17.31■□□□□ 0.36
CPSF4-204ENST00000436336 DNASE2O00115 360 aaPredicted RBP17.3■□□□□ 0.36
CPSF4-204ENST00000436336 ISLRO14498 428 aa17.3■□□□□ 0.36
CPSF4-204ENST00000436336 PRELID1Q9Y255 219 aa17.3■□□□□ 0.36
CPSF4-204ENST00000436336 IGFL4Q6B9Z1 124 aa17.3■□□□□ 0.36
CPSF4-204ENST00000436336 C11orf52Q96A22 123 aa17.3■□□□□ 0.36
CPSF4-204ENST00000436336 EPDR1Q9UM22 224 aa17.3■□□□□ 0.36
CPSF4-204ENST00000436336 TRAV2A0A0B4J234 112 aa17.29■□□□□ 0.36
CPSF4-204ENST00000436336 SCO2A0A1W2PP80 73 aa17.29■□□□□ 0.36
CPSF4-204ENST00000436336 K7EQG2 157 aa17.29■□□□□ 0.36
CPSF4-204ENST00000436336 IGLV1-51P01701 117 aa17.29■□□□□ 0.36
CPSF4-204ENST00000436336 WFDC3Q8IUB2 231 aa17.29■□□□□ 0.36
CPSF4-204ENST00000436336 ARL6IP6Q8N6S5 226 aa17.29■□□□□ 0.36
CPSF4-204ENST00000436336 CYB561D1Q8N8Q1 229 aa17.29■□□□□ 0.36
CPSF4-204ENST00000436336 OR2K2Q8NGT1 345 aa17.29■□□□□ 0.36
CPSF4-204ENST00000436336 HIST1H2BAQ96A08 127 aa17.29■□□□□ 0.36
CPSF4-204ENST00000436336 M0R3E3 92 aa17.28■□□□□ 0.36
CPSF4-204ENST00000436336 SFTA3P0C7M3 94 aa17.28■□□□□ 0.36
CPSF4-204ENST00000436336 CD33P20138 364 aa17.28■□□□□ 0.36
CPSF4-204ENST00000436336 HLA-DMBP28068 263 aa17.28■□□□□ 0.36
CPSF4-204ENST00000436336 ID1P41134 155 aa17.28■□□□□ 0.36
CPSF4-204ENST00000436336 WFDC9Q8NEX5 89 aa17.28■□□□□ 0.36
CPSF4-204ENST00000436336 MRPL53Q96EL3 112 aaKnown RBP17.28■□□□□ 0.36
CPSF4-204ENST00000436336 COL6A5A8TX70 2615 aa17.28■□□□□ 0.36
CPSF4-204ENST00000436336 TMEM218A2RU14 115 aa17.27■□□□□ 0.36
CPSF4-204ENST00000436336 CSN1S1P47710 185 aa17.27■□□□□ 0.36
CPSF4-204ENST00000436336 TFPI2P48307 235 aa17.27■□□□□ 0.36
CPSF4-204ENST00000436336 INSL3P51460 131 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms