RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 KCNIP2Q9NS61 270 aa11.81□□□□□ -0.52
SMPD4-207ENST00000435455 HSPB11Q9Y547 144 aa11.81□□□□□ -0.52
SMPD4-207ENST00000435455 CXCL3P19876 107 aa11.8□□□□□ -0.52
SMPD4-207ENST00000435455 RPL12P30050 165 aaKnown RBP11.8□□□□□ -0.52
SMPD4-207ENST00000435455 PMS2P11Q13670 270 aa11.8□□□□□ -0.52
SMPD4-207ENST00000435455 PSG3Q16557 428 aa11.8□□□□□ -0.52
SMPD4-207ENST00000435455 MORN5Q5VZ52 161 aa11.8□□□□□ -0.52
SMPD4-207ENST00000435455 IGFL4Q6B9Z1 124 aa11.8□□□□□ -0.52
SMPD4-207ENST00000435455 SLC50A1Q9BRV3 221 aa11.8□□□□□ -0.52
SMPD4-207ENST00000435455 MBD2Q9UBB5 411 aa11.8□□□□□ -0.52
SMPD4-207ENST00000435455 IGHV4-28A0A0C4DH34 117 aa11.79□□□□□ -0.52
SMPD4-207ENST00000435455 NUPR2A6NF83 97 aa11.79□□□□□ -0.52
SMPD4-207ENST00000435455 ATP5SQ99766 215 aa11.79□□□□□ -0.52
SMPD4-207ENST00000435455 MFFQ9GZY8 342 aa11.79□□□□□ -0.52
SMPD4-207ENST00000435455 HRH4Q9H3N8 390 aa11.79□□□□□ -0.52
SMPD4-207ENST00000435455 ZNF331Q9NQX6 463 aaPredicted RBP11.79□□□□□ -0.52
SMPD4-207ENST00000435455 X6R8D5 127 aa11.79□□□□□ -0.52
SMPD4-207ENST00000435455 C17orf112F2Z3M2 114 aa11.78□□□□□ -0.52
SMPD4-207ENST00000435455 DEFB4AO15263 64 aa11.78□□□□□ -0.52
SMPD4-207ENST00000435455 AMBPP02760 352 aa11.78□□□□□ -0.52
SMPD4-207ENST00000435455 FXYD7P58549 80 aa11.78□□□□□ -0.52
SMPD4-207ENST00000435455 GUK1Q16774 197 aa11.78□□□□□ -0.52
SMPD4-207ENST00000435455 C11orf45Q8TAV5 145 aa11.78□□□□□ -0.52
SMPD4-207ENST00000435455 WDR61Q9GZS3 305 aaKnown RBP11.78□□□□□ -0.52
SMPD4-207ENST00000435455 SLC35B3Q9H1N7 401 aa11.78□□□□□ -0.52
SMPD4-207ENST00000435455 DYNC2H1Q8NCM8 4307 aaKnown RBP11.77□□□□□ -0.53
SMPD4-207ENST00000435455 TRAV5A0A0B4J249 113 aa11.77□□□□□ -0.53
SMPD4-207ENST00000435455 IFNA5P01569 189 aa11.77□□□□□ -0.53
SMPD4-207ENST00000435455 RBMY1A1P0DJD3 496 aaKnown RBP11.77□□□□□ -0.53
SMPD4-207ENST00000435455 RBMY1CP0DJD4 496 aa11.77□□□□□ -0.53
SMPD4-207ENST00000435455 IGLC2P0DOY2 106 aa11.77□□□□□ -0.53
SMPD4-207ENST00000435455 CNN1P51911 297 aaKnown RBP11.77□□□□□ -0.53
SMPD4-207ENST00000435455 RBMY1FQ15415 496 aaKnown RBP11.77□□□□□ -0.53
SMPD4-207ENST00000435455 FCN2Q15485 313 aa11.77□□□□□ -0.53
SMPD4-207ENST00000435455 RGS21Q2M5E4 152 aa11.77□□□□□ -0.53
SMPD4-207ENST00000435455 AMTNQ6UX39 209 aa11.77□□□□□ -0.53
SMPD4-207ENST00000435455 ASB13Q8WXK3 278 aa11.77□□□□□ -0.53
SMPD4-207ENST00000435455 NEU1Q99519 415 aa11.77□□□□□ -0.53
SMPD4-207ENST00000435455 LYSTQ99698 3801 aa11.77□□□□□ -0.53
SMPD4-207ENST00000435455 LCE6AA0A183 80 aa11.76□□□□□ -0.53
SMPD4-207ENST00000435455 JTBO76095 146 aa11.76□□□□□ -0.53
SMPD4-207ENST00000435455 HLA-DMBP28068 263 aa11.76□□□□□ -0.53
SMPD4-207ENST00000435455 CEMP1Q6PRD7 247 aaPredicted RBP11.76□□□□□ -0.53
SMPD4-207ENST00000435455 ZNF705AQ6ZN79 300 aaPredicted RBP11.76□□□□□ -0.53
SMPD4-207ENST00000435455 OR11H7Q8NGC8 314 aa11.76□□□□□ -0.53
SMPD4-207ENST00000435455 OR8A1Q8NGG7 326 aa11.76□□□□□ -0.53
SMPD4-207ENST00000435455 RPUSD4Q96CM3 377 aaKnown RBP11.76□□□□□ -0.53
SMPD4-207ENST00000435455 TMEM14CQ9P0S9 112 aa11.76□□□□□ -0.53
SMPD4-207ENST00000435455 KLK5Q9Y337 293 aaPredicted RBP11.76□□□□□ -0.53
SMPD4-207ENST00000435455 GOLT1BQ9Y3E0 138 aa11.76□□□□□ -0.53
SMPD4-207ENST00000435455 SMIM9A6NGZ8 99 aa11.75□□□□□ -0.53
SMPD4-207ENST00000435455 ZNF705FA8MVS1 300 aaPredicted RBP11.75□□□□□ -0.53
SMPD4-207ENST00000435455 H3BQ15 152 aa11.75□□□□□ -0.53
SMPD4-207ENST00000435455 SLC17A3O00476 420 aa11.75□□□□□ -0.53
SMPD4-207ENST00000435455 ZNF253O75346 499 aa11.75□□□□□ -0.53
SMPD4-207ENST00000435455 SNRPCP09234 159 aaKnown RBP11.75□□□□□ -0.53
SMPD4-207ENST00000435455 ZNF705DP0CH99 300 aaPredicted RBP11.75□□□□□ -0.53
SMPD4-207ENST00000435455 ZNF705BP0CI00 300 aaPredicted RBP11.75□□□□□ -0.53
SMPD4-207ENST00000435455 NANOS2P60321 138 aaKnown RBP11.75□□□□□ -0.53
SMPD4-207ENST00000435455 HIST1H1AQ02539 215 aaPredicted RBP11.75□□□□□ -0.53
SMPD4-207ENST00000435455 SCGB1C1Q8TD33 95 aa11.75□□□□□ -0.53
SMPD4-207ENST00000435455 PHLDA1Q8WV24 401 aaPredicted RBP11.75□□□□□ -0.53
SMPD4-207ENST00000435455 SAT2Q96F10 170 aaPredicted RBP11.75□□□□□ -0.53
SMPD4-207ENST00000435455 PARD6GQ9BYG4 376 aaPredicted RBP11.75□□□□□ -0.53
SMPD4-207ENST00000435455 H3BTX0 84 aa11.74□□□□□ -0.53
SMPD4-207ENST00000435455 GIPP09681 153 aaPredicted RBP11.74□□□□□ -0.53
SMPD4-207ENST00000435455 GCSAMLQ5JQS6 135 aa11.74□□□□□ -0.53
SMPD4-207ENST00000435455 IGF2BP2-AS1Q96M15 143 aa11.74□□□□□ -0.53
SMPD4-207ENST00000435455 SMIM3Q9BZL3 60 aa11.74□□□□□ -0.53
SMPD4-207ENST00000435455 PPP1R14DQ9NXH3 145 aa11.74□□□□□ -0.53
SMPD4-207ENST00000435455 RYR3Q15413 4870 aa11.73□□□□□ -0.53
SMPD4-207ENST00000435455 IGHV3OR16-12A0A075B7B8 117 aa11.73□□□□□ -0.53
SMPD4-207ENST00000435455 TMEM189A5PLL7 270 aa11.73□□□□□ -0.53
SMPD4-207ENST00000435455 BOLA2-SMG1P6H3BVE0 249 aa11.73□□□□□ -0.53
SMPD4-207ENST00000435455 HIST1H1EP10412 219 aaKnown RBP11.73□□□□□ -0.53
SMPD4-207ENST00000435455 RHOBP62745 196 aa11.73□□□□□ -0.53
SMPD4-207ENST00000435455 PDE6HQ13956 83 aa11.73□□□□□ -0.53
SMPD4-207ENST00000435455 OR10J6PQ8NGY7 276 aa11.73□□□□□ -0.53
SMPD4-207ENST00000435455 MRPL32Q9BYC8 188 aaKnown RBP11.73□□□□□ -0.53
SMPD4-207ENST00000435455 ZNF586Q9NXT0 402 aa11.73□□□□□ -0.53
SMPD4-207ENST00000435455 RFNGQ9Y644 331 aa11.73□□□□□ -0.53
SMPD4-207ENST00000435455 TRBV19A0A075B6N1 114 aa11.72□□□□□ -0.53
SMPD4-207ENST00000435455 M0R2Z0 102 aa11.72□□□□□ -0.53
SMPD4-207ENST00000435455 INSP01308 110 aa11.72□□□□□ -0.53
SMPD4-207ENST00000435455 SPINK13Q1W4C9 94 aa11.72□□□□□ -0.53
SMPD4-207ENST00000435455 FFAR4Q5NUL3 377 aa11.72□□□□□ -0.53
SMPD4-207ENST00000435455 C1orf158Q8N1D5 194 aa11.72□□□□□ -0.53
SMPD4-207ENST00000435455 TMEM208Q9BTX3 173 aa11.72□□□□□ -0.53
SMPD4-207ENST00000435455 PYYP10082 97 aa11.71□□□□□ -0.53
SMPD4-207ENST00000435455 OXA1LQ15070 435 aa11.71□□□□□ -0.53
SMPD4-207ENST00000435455 MIR17HGQ75NE6 70 aa11.71□□□□□ -0.53
SMPD4-207ENST00000435455 FAM167A-AS1Q96KT0 104 aa11.71□□□□□ -0.53
SMPD4-207ENST00000435455 SLC25A2Q9BXI2 301 aa11.71□□□□□ -0.53
SMPD4-207ENST00000435455 FUT9Q9Y231 359 aa11.71□□□□□ -0.53
SMPD4-207ENST00000435455 PRELID1Q9Y255 219 aa11.71□□□□□ -0.53
SMPD4-207ENST00000435455 TIMM9Q9Y5J7 89 aa11.71□□□□□ -0.53
SMPD4-207ENST00000435455 C11orf94C9JXX5 98 aa11.7□□□□□ -0.54
SMPD4-207ENST00000435455 HBE1P02100 147 aa11.7□□□□□ -0.54
SMPD4-207ENST00000435455 RRN3P1Q2M238 152 aa11.7□□□□□ -0.54
SMPD4-207ENST00000435455 MRPL53Q96EL3 112 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 265.9 ms