RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 DPF1Q92782 380 aa8.59□□□□□ -1.03
LINC00539-203ENST00000434601 GRAMD2BQ96HH9 432 aa8.59□□□□□ -1.03
LINC00539-203ENST00000434601 GPR82Q96P67 336 aa8.59□□□□□ -1.03
LINC00539-203ENST00000434601 SEC11CQ9BY50 192 aa8.59□□□□□ -1.03
LINC00539-203ENST00000434601 ZNF586Q9NXT0 402 aa8.59□□□□□ -1.03
LINC00539-203ENST00000434601 TRBV19A0A075B6N1 114 aa8.58□□□□□ -1.04
LINC00539-203ENST00000434601 IGHV3OR16-13A0A075B7E8 117 aa8.58□□□□□ -1.04
LINC00539-203ENST00000434601 A0A087X0K7 114 aa8.58□□□□□ -1.04
LINC00539-203ENST00000434601 IGHV3-74A0A0B4J1X5 117 aa8.58□□□□□ -1.04
LINC00539-203ENST00000434601 IGHV7-4-1A0A0J9YVY3 117 aa8.58□□□□□ -1.04
LINC00539-203ENST00000434601 A0A1W2PS18 150 aa8.58□□□□□ -1.04
LINC00539-203ENST00000434601 TMEM250H0YL14 139 aa8.58□□□□□ -1.04
LINC00539-203ENST00000434601 H3BTX0 84 aa8.58□□□□□ -1.04
LINC00539-203ENST00000434601 LGALS9O00182 355 aa8.58□□□□□ -1.04
LINC00539-203ENST00000434601 SNRPCP09234 159 aaKnown RBP8.58□□□□□ -1.04
LINC00539-203ENST00000434601 ATF4P18848 351 aaPredicted RBP8.58□□□□□ -1.04
LINC00539-203ENST00000434601 GALR1P47211 349 aa8.58□□□□□ -1.04
LINC00539-203ENST00000434601 CEBPGP53567 150 aa8.58□□□□□ -1.04
LINC00539-203ENST00000434601 PDE6HQ13956 83 aa8.58□□□□□ -1.04
LINC00539-203ENST00000434601 BEAN1Q3B7T3 259 aa8.58□□□□□ -1.04
LINC00539-203ENST00000434601 TM4SF20Q53R12 229 aa8.58□□□□□ -1.04
LINC00539-203ENST00000434601 KPRPQ5T749 579 aaPredicted RBP8.58□□□□□ -1.04
LINC00539-203ENST00000434601 HIST2H2BDQ6DRA6 164 aa8.58□□□□□ -1.04
LINC00539-203ENST00000434601 C16orf54Q6UWD8 224 aa8.58□□□□□ -1.04
LINC00539-203ENST00000434601 CCDC28AQ8IWP9 274 aa8.58□□□□□ -1.04
LINC00539-203ENST00000434601 OR11H1Q8NG94 326 aa8.58□□□□□ -1.04
LINC00539-203ENST00000434601 OR1N2Q8NGR9 330 aa8.58□□□□□ -1.04
LINC00539-203ENST00000434601 GLMPQ8WWB7 406 aa8.58□□□□□ -1.04
LINC00539-203ENST00000434601 NKX6-2Q9C056 277 aaPredicted RBP8.58□□□□□ -1.04
LINC00539-203ENST00000434601 CARHSP1Q9Y2V2 147 aaKnown RBP8.58□□□□□ -1.04
LINC00539-203ENST00000434601 SCO2A0A1W2PP80 73 aa8.57□□□□□ -1.04
LINC00539-203ENST00000434601 A0A1W2PRX2 142 aa8.57□□□□□ -1.04
LINC00539-203ENST00000434601 TMEM213A2RRL7 107 aa8.57□□□□□ -1.04
LINC00539-203ENST00000434601 G3V4G9 280 aa8.57□□□□□ -1.04
LINC00539-203ENST00000434601 BMI1P35226 326 aa8.57□□□□□ -1.04
LINC00539-203ENST00000434601 SLURP1P55000 103 aa8.57□□□□□ -1.04
LINC00539-203ENST00000434601 SYNJ2BPP57105 145 aa8.57□□□□□ -1.04
LINC00539-203ENST00000434601 RANP62826 216 aaKnown RBP8.57□□□□□ -1.04
LINC00539-203ENST00000434601 SOHLH1Q5JUK2 328 aa8.57□□□□□ -1.04
LINC00539-203ENST00000434601 C10orf91Q5T1B1 145 aa8.57□□□□□ -1.04
LINC00539-203ENST00000434601 SAMD5Q5TGI4 173 aa8.57□□□□□ -1.04
LINC00539-203ENST00000434601 FAM90A2PQ658T7 463 aa8.57□□□□□ -1.04
LINC00539-203ENST00000434601 SIGLEC15Q6ZMC9 328 aa8.57□□□□□ -1.04
LINC00539-203ENST00000434601 C11orf52Q96A22 123 aa8.57□□□□□ -1.04
LINC00539-203ENST00000434601 ELOVL1Q9BW60 279 aa8.57□□□□□ -1.04
LINC00539-203ENST00000434601 Q9H3A6 140 aa8.57□□□□□ -1.04
LINC00539-203ENST00000434601 SLC17A3O00476 420 aa8.56□□□□□ -1.04
LINC00539-203ENST00000434601 ZNF253O75346 499 aa8.56□□□□□ -1.04
LINC00539-203ENST00000434601 NDUFB4O95168 129 aa8.56□□□□□ -1.04
LINC00539-203ENST00000434601 MYCNOSP40205 109 aa8.56□□□□□ -1.04
LINC00539-203ENST00000434601 SUMO1P63165 101 aaKnown RBP8.56□□□□□ -1.04
LINC00539-203ENST00000434601 FHL3Q13643 280 aa8.56□□□□□ -1.04
LINC00539-203ENST00000434601 KLF5Q13887 457 aaPredicted RBP8.56□□□□□ -1.04
LINC00539-203ENST00000434601 RPUSD4Q96CM3 377 aaKnown RBP8.56□□□□□ -1.04
LINC00539-203ENST00000434601 DUX3Q96PT4 197 aa8.56□□□□□ -1.04
LINC00539-203ENST00000434601 TCEAL7Q9BRU2 100 aa8.56□□□□□ -1.04
LINC00539-203ENST00000434601 OTORQ9NRC9 128 aa8.56□□□□□ -1.04
LINC00539-203ENST00000434601 SMPXQ9UHP9 88 aa8.56□□□□□ -1.04
LINC00539-203ENST00000434601 SMAD5-AS1Q9Y6J3 95 aa8.56□□□□□ -1.04
LINC00539-203ENST00000434601 ZNF785A8K8V0 405 aa8.55□□□□□ -1.04
LINC00539-203ENST00000434601 CCL24O00175 119 aa8.55□□□□□ -1.04
LINC00539-203ENST00000434601 CHEK1O14757 476 aa8.55□□□□□ -1.04
LINC00539-203ENST00000434601 APOC3P02656 99 aa8.55□□□□□ -1.04
LINC00539-203ENST00000434601 EDN2P20800 178 aa8.55□□□□□ -1.04
LINC00539-203ENST00000434601 MEOX2P50222 304 aa8.55□□□□□ -1.04
LINC00539-203ENST00000434601 PSG9Q00887 426 aa8.55□□□□□ -1.04
LINC00539-203ENST00000434601 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.55□□□□□ -1.04
LINC00539-203ENST00000434601 LYPD1Q8N2G4 141 aa8.55□□□□□ -1.04
LINC00539-203ENST00000434601 C5orf17Q8NAS9 161 aa8.55□□□□□ -1.04
LINC00539-203ENST00000434601 RAX2Q96IS3 184 aa8.55□□□□□ -1.04
LINC00539-203ENST00000434601 C17orf77Q96MU5 243 aa8.55□□□□□ -1.04
LINC00539-203ENST00000434601 RHPN1-AS1Q9BWJ2 59 aa8.55□□□□□ -1.04
LINC00539-203ENST00000434601 PARLQ9H300 379 aa8.55□□□□□ -1.04
LINC00539-203ENST00000434601 PGPA6NDG6 321 aa8.54□□□□□ -1.04
LINC00539-203ENST00000434601 HELTA6NFD8 242 aa8.54□□□□□ -1.04
LINC00539-203ENST00000434601 C2orf70A6NJV1 201 aa8.54□□□□□ -1.04
LINC00539-203ENST00000434601 ADARB2-AS1A8MUL3 147 aa8.54□□□□□ -1.04
LINC00539-203ENST00000434601 ZNF727A8MUV8 499 aa8.54□□□□□ -1.04
LINC00539-203ENST00000434601 PEX7O00628 323 aa8.54□□□□□ -1.04
LINC00539-203ENST00000434601 SLC25A5P05141 298 aaKnown RBP8.54□□□□□ -1.04
LINC00539-203ENST00000434601 GUCA2BQ16661 112 aa8.54□□□□□ -1.04
LINC00539-203ENST00000434601 ZNF674Q2M3X9 581 aa8.54□□□□□ -1.04
LINC00539-203ENST00000434601 FAM74A3Q4VXF1 159 aa8.54□□□□□ -1.04
LINC00539-203ENST00000434601 NDUFA11Q86Y39 141 aa8.54□□□□□ -1.04
LINC00539-203ENST00000434601 EXOC3-AS1Q8N2X6 119 aa8.54□□□□□ -1.04
LINC00539-203ENST00000434601 SVBPQ8N300 66 aa8.54□□□□□ -1.04
LINC00539-203ENST00000434601 SMIM7Q9BQ49 75 aa8.54□□□□□ -1.04
LINC00539-203ENST00000434601 SLC50A1Q9BRV3 221 aa8.54□□□□□ -1.04
LINC00539-203ENST00000434601 NIPSNAP3BQ9BS92 247 aa8.54□□□□□ -1.04
LINC00539-203ENST00000434601 AAMDCQ9H7C9 122 aa8.54□□□□□ -1.04
LINC00539-203ENST00000434601 PEMTQ9UBM1 199 aa8.54□□□□□ -1.04
LINC00539-203ENST00000434601 AKR1C3P42330 323 aa8.53□□□□□ -1.04
LINC00539-203ENST00000434601 GNG5P63218 68 aa8.53□□□□□ -1.04
LINC00539-203ENST00000434601 NSUN5P1Q3KNT7 163 aa8.53□□□□□ -1.04
LINC00539-203ENST00000434601 OR9G4Q8NGQ1 327 aa8.53□□□□□ -1.04
LINC00539-203ENST00000434601 CMTM2Q8TAZ6 248 aa8.53□□□□□ -1.04
LINC00539-203ENST00000434601 MRAPQ8TCY5 172 aa8.53□□□□□ -1.04
LINC00539-203ENST00000434601 C2CD4CQ8TF44 421 aa8.53□□□□□ -1.04
LINC00539-203ENST00000434601 DLX4Q92988 240 aaPredicted RBP8.53□□□□□ -1.04
LINC00539-203ENST00000434601 HIST1H2BAQ96A08 127 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms