RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 TMEM178AQ8NBL3 297 aa9.18□□□□□ -0.94
HMGCS1-202ENST00000433297 SLC25A39Q9BZJ4 359 aaPredicted RBP9.18□□□□□ -0.94
HMGCS1-202ENST00000433297 BOD1L1Q8NFC6 3051 aa9.18□□□□□ -0.94
HMGCS1-202ENST00000433297 SPAARA0A1B0GVQ0 90 aa9.18□□□□□ -0.94
HMGCS1-202ENST00000433297 J3QR89 54 aa9.18□□□□□ -0.94
HMGCS1-202ENST00000433297 CRIP1P50238 77 aa9.18□□□□□ -0.94
HMGCS1-202ENST00000433297 RAB9AP51151 201 aa9.18□□□□□ -0.94
HMGCS1-202ENST00000433297 VMA21Q3ZAQ7 101 aa9.18□□□□□ -0.94
HMGCS1-202ENST00000433297 ZNF833PQ6ZTB9 187 aa9.18□□□□□ -0.94
HMGCS1-202ENST00000433297 ATP6V0BQ99437 205 aa9.18□□□□□ -0.94
HMGCS1-202ENST00000433297 K7EQM0 130 aa9.17□□□□□ -0.94
HMGCS1-202ENST00000433297 NPYP01303 97 aa9.17□□□□□ -0.94
HMGCS1-202ENST00000433297 LCNL1Q6ZST4 164 aa9.17□□□□□ -0.94
HMGCS1-202ENST00000433297 CHAC1Q9BUX1 264 aa9.17□□□□□ -0.94
HMGCS1-202ENST00000433297 TMEM189A5PLL7 270 aa9.17□□□□□ -0.94
HMGCS1-202ENST00000433297 SIVA1O15304 175 aa9.17□□□□□ -0.94
HMGCS1-202ENST00000433297 DLX1P56177 255 aa9.17□□□□□ -0.94
HMGCS1-202ENST00000433297 MRPL51Q4U2R6 128 aaKnown RBP9.17□□□□□ -0.94
HMGCS1-202ENST00000433297 DPF1Q92782 380 aa9.17□□□□□ -0.94
HMGCS1-202ENST00000433297 FER1L6-AS2Q96M78 137 aa9.17□□□□□ -0.94
HMGCS1-202ENST00000433297 TRGV9Q99603 122 aa9.17□□□□□ -0.94
HMGCS1-202ENST00000433297 TMEM133Q9H2Q1 129 aa9.17□□□□□ -0.94
HMGCS1-202ENST00000433297 S4R3C0 116 aa9.17□□□□□ -0.94
HMGCS1-202ENST00000433297 CNTFRP26992 372 aa9.17□□□□□ -0.94
HMGCS1-202ENST00000433297 CKS1BP61024 79 aa9.17□□□□□ -0.94
HMGCS1-202ENST00000433297 ATP5G2Q06055 141 aa9.17□□□□□ -0.94
HMGCS1-202ENST00000433297 PROCRQ9UNN8 238 aa9.17□□□□□ -0.94
HMGCS1-202ENST00000433297 CCL11P51671 97 aa9.16□□□□□ -0.94
HMGCS1-202ENST00000433297 FAM104BQ5XKR9 115 aa9.16□□□□□ -0.94
HMGCS1-202ENST00000433297 RASL11BQ9BPW5 248 aa9.16□□□□□ -0.94
HMGCS1-202ENST00000433297 IGLV1-44P01699 117 aa9.16□□□□□ -0.94
HMGCS1-202ENST00000433297 EVI2AP22794 236 aa9.16□□□□□ -0.94
HMGCS1-202ENST00000433297 TMEM160Q9NX00 188 aa9.16□□□□□ -0.94
HMGCS1-202ENST00000433297 CEP250Q9BV73 2442 aa9.16□□□□□ -0.94
HMGCS1-202ENST00000433297 A0A1W2PNU3 283 aaPredicted RBP9.15□□□□□ -0.94
HMGCS1-202ENST00000433297 C19orf67A6NJJ6 358 aa9.15□□□□□ -0.94
HMGCS1-202ENST00000433297 OVOL3O00110 214 aa9.15□□□□□ -0.94
HMGCS1-202ENST00000433297 RPL27AP46776 148 aaKnown RBP9.15□□□□□ -0.94
HMGCS1-202ENST00000433297 CCDC144NLQ6NUI1 221 aa9.15□□□□□ -0.94
HMGCS1-202ENST00000433297 C16orf54Q6UWD8 224 aa9.15□□□□□ -0.94
HMGCS1-202ENST00000433297 PPIFP30405 207 aaKnown RBP9.15□□□□□ -0.94
HMGCS1-202ENST00000433297 CEACAM3P40198 252 aa9.15□□□□□ -0.94
HMGCS1-202ENST00000433297 LEPP41159 167 aa9.15□□□□□ -0.94
HMGCS1-202ENST00000433297 IGHV1-46P01743 117 aa9.15□□□□□ -0.95
HMGCS1-202ENST00000433297 INSL3P51460 131 aa9.15□□□□□ -0.95
HMGCS1-202ENST00000433297 ZNF479Q96JC4 524 aa9.15□□□□□ -0.95
HMGCS1-202ENST00000433297 SPAG8Q99932 426 aaPredicted RBP9.15□□□□□ -0.95
HMGCS1-202ENST00000433297 FOXC2Q99958 501 aa9.15□□□□□ -0.95
HMGCS1-202ENST00000433297 ZNF71Q9NQZ8 489 aaPredicted RBP9.15□□□□□ -0.95
HMGCS1-202ENST00000433297 PKDREJQ9NTG1 2253 aa9.15□□□□□ -0.95
HMGCS1-202ENST00000433297 KALRNO60229 2985 aa9.15□□□□□ -0.95
HMGCS1-202ENST00000433297 TRBV25-1A0A075B6N4 114 aa9.14□□□□□ -0.95
HMGCS1-202ENST00000433297 TM4SF5O14894 197 aa9.14□□□□□ -0.95
HMGCS1-202ENST00000433297 IGLV2-23P01705 113 aa9.14□□□□□ -0.95
HMGCS1-202ENST00000433297 ZC2HC1BQ5TFG8 222 aa9.14□□□□□ -0.95
HMGCS1-202ENST00000433297 NGBQ9NPG2 151 aa9.14□□□□□ -0.95
HMGCS1-202ENST00000433297 LINC00312Q9Y6C7 94 aa9.14□□□□□ -0.95
HMGCS1-202ENST00000433297 TMEM200BQ69YZ2 307 aa9.14□□□□□ -0.95
HMGCS1-202ENST00000433297 SLC25A15Q9Y619 301 aa9.14□□□□□ -0.95
HMGCS1-202ENST00000433297 A0A1B0GW15 77 aa9.14□□□□□ -0.95
HMGCS1-202ENST00000433297 GAS8-AS1O95177 125 aa9.14□□□□□ -0.95
HMGCS1-202ENST00000433297 SFTA2Q6UW10 78 aa9.14□□□□□ -0.95
HMGCS1-202ENST00000433297 SPANXB1Q9NS25 103 aaPredicted RBP9.14□□□□□ -0.95
HMGCS1-202ENST00000433297 MSRB1Q9NZV6 116 aa9.14□□□□□ -0.95
HMGCS1-202ENST00000433297 TRAV26-1A0A087WT03 109 aa9.13□□□□□ -0.95
HMGCS1-202ENST00000433297 NPIPB5A8MRT5 1133 aa9.13□□□□□ -0.95
HMGCS1-202ENST00000433297 SCGB2A2Q13296 93 aa9.13□□□□□ -0.95
HMGCS1-202ENST00000433297 PLGLAQ15195 96 aa9.13□□□□□ -0.95
HMGCS1-202ENST00000433297 FAM169BQ8N8A8 192 aa9.13□□□□□ -0.95
HMGCS1-202ENST00000433297 C1orf162Q8NEQ5 155 aaPredicted RBP9.13□□□□□ -0.95
HMGCS1-202ENST00000433297 SPRY4Q9C004 299 aa9.13□□□□□ -0.95
HMGCS1-202ENST00000433297 TRBV19A0A075B6N1 114 aa9.13□□□□□ -0.95
HMGCS1-202ENST00000433297 GLRXP35754 106 aa9.13□□□□□ -0.95
HMGCS1-202ENST00000433297 CCL17Q92583 94 aa9.13□□□□□ -0.95
HMGCS1-202ENST00000433297 SCNM1Q9BWG6 230 aa9.12□□□□□ -0.95
HMGCS1-202ENST00000433297 A0A1B0GWB2 263 aa9.12□□□□□ -0.95
HMGCS1-202ENST00000433297 IGLL5B9A064 214 aa9.12□□□□□ -0.95
HMGCS1-202ENST00000433297 INS-IGF2F8WCM5 200 aa9.12□□□□□ -0.95
HMGCS1-202ENST00000433297 SH2D1AO60880 128 aa9.12□□□□□ -0.95
HMGCS1-202ENST00000433297 IGKCP01834 107 aa9.12□□□□□ -0.95
HMGCS1-202ENST00000433297 CEND1Q8N111 149 aa9.12□□□□□ -0.95
HMGCS1-202ENST00000433297 HIST1H4GQ99525 98 aa9.12□□□□□ -0.95
HMGCS1-202ENST00000433297 DSCAML1Q8TD84 2053 aa9.12□□□□□ -0.95
HMGCS1-202ENST00000433297 SPENQ96T58 3664 aaKnown RBP9.12□□□□□ -0.95
HMGCS1-202ENST00000433297 TRAV40A0A0B4J280 105 aa9.12□□□□□ -0.95
HMGCS1-202ENST00000433297 F8W1H4 67 aa9.12□□□□□ -0.95
HMGCS1-202ENST00000433297 IL4P05112 153 aa9.12□□□□□ -0.95
HMGCS1-202ENST00000433297 CRYGCP07315 174 aa9.12□□□□□ -0.95
HMGCS1-202ENST00000433297 GATA1P15976 413 aaPredicted RBP9.12□□□□□ -0.95
HMGCS1-202ENST00000433297 GAGE13Q4V321 117 aa9.12□□□□□ -0.95
HMGCS1-202ENST00000433297 Q6AWC8 147 aa9.12□□□□□ -0.95
HMGCS1-202ENST00000433297 IGFL4Q6B9Z1 124 aa9.12□□□□□ -0.95
HMGCS1-202ENST00000433297 FOXI2Q6ZQN5 318 aa9.12□□□□□ -0.95
HMGCS1-202ENST00000433297 Q8TAT8 98 aa9.12□□□□□ -0.95
HMGCS1-202ENST00000433297 PLSCR4Q9NRQ2 329 aa9.12□□□□□ -0.95
HMGCS1-202ENST00000433297 IGKV2-40A0A087WW87 121 aaPredicted RBP9.11□□□□□ -0.95
HMGCS1-202ENST00000433297 WI2-2373I1.2A0A1W2PRP0 233 aa9.11□□□□□ -0.95
HMGCS1-202ENST00000433297 TMEM8BA6NDV4 472 aa9.11□□□□□ -0.95
HMGCS1-202ENST00000433297 LAMTOR5O43504 91 aa9.11□□□□□ -0.95
HMGCS1-202ENST00000433297 IGKV2D-40P01614 121 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms