RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 KIR2DL5BA0A0G2JPC4 375 aa4.22□□□□□ -1.73
HMGB3P24-201ENST00000433260 A0A0J9YWU9 116 aa4.22□□□□□ -1.73
HMGB3P24-201ENST00000433260 SOCS3O14543 225 aa4.22□□□□□ -1.73
HMGB3P24-201ENST00000433260 DEFB4AO15263 64 aa4.22□□□□□ -1.73
HMGB3P24-201ENST00000433260 LYL1P12980 280 aa4.22□□□□□ -1.73
HMGB3P24-201ENST00000433260 RPL7P18124 248 aaKnown RBP4.22□□□□□ -1.73
HMGB3P24-201ENST00000433260 RPL29P47914 159 aaKnown RBP4.22□□□□□ -1.73
HMGB3P24-201ENST00000433260 B2MP61769 119 aa4.22□□□□□ -1.73
HMGB3P24-201ENST00000433260 Q5BKY6 102 aa4.22□□□□□ -1.73
HMGB3P24-201ENST00000433260 GCSAMLQ5JQS6 135 aa4.22□□□□□ -1.73
HMGB3P24-201ENST00000433260 EBLN2Q6P2I7 272 aa4.22□□□□□ -1.73
HMGB3P24-201ENST00000433260 Q6ZWC4 215 aa4.22□□□□□ -1.73
HMGB3P24-201ENST00000433260 KIR2DL5AQ8N109 375 aa4.22□□□□□ -1.73
HMGB3P24-201ENST00000433260 OR11H2Q8NH07 326 aa4.22□□□□□ -1.73
HMGB3P24-201ENST00000433260 KIR2DL5BQ8NHK3 375 aa4.22□□□□□ -1.73
HMGB3P24-201ENST00000433260 MUC7Q8TAX7 377 aa4.22□□□□□ -1.73
HMGB3P24-201ENST00000433260 SCGB1C1Q8TD33 95 aa4.22□□□□□ -1.73
HMGB3P24-201ENST00000433260 GPR82Q96P67 336 aa4.22□□□□□ -1.73
HMGB3P24-201ENST00000433260 NPCDR1Q9BY65 106 aa4.22□□□□□ -1.73
HMGB3P24-201ENST00000433260 RPRMQ9NS64 109 aa4.22□□□□□ -1.73
HMGB3P24-201ENST00000433260 SLC39A9Q9NUM3 307 aa4.22□□□□□ -1.73
HMGB3P24-201ENST00000433260 MBD2Q9UBB5 411 aa4.22□□□□□ -1.73
HMGB3P24-201ENST00000433260 XCL2Q9UBD3 114 aa4.22□□□□□ -1.73
HMGB3P24-201ENST00000433260 RFNGQ9Y644 331 aa4.22□□□□□ -1.73
HMGB3P24-201ENST00000433260 PXMP4Q9Y6I8 212 aa4.22□□□□□ -1.73
HMGB3P24-201ENST00000433260 IGHV3OR16-12A0A075B7B8 117 aa4.21□□□□□ -1.74
HMGB3P24-201ENST00000433260 TRAV8-2A0A0B4J237 113 aa4.21□□□□□ -1.74
HMGB3P24-201ENST00000433260 ZNF705FA8MVS1 300 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P24-201ENST00000433260 C17orf112F2Z3M2 114 aa4.21□□□□□ -1.74
HMGB3P24-201ENST00000433260 H3BMM0 161 aa4.21□□□□□ -1.74
HMGB3P24-201ENST00000433260 C3orf84H3BNL1 204 aa4.21□□□□□ -1.74
HMGB3P24-201ENST00000433260 ISLRO14498 428 aa4.21□□□□□ -1.74
HMGB3P24-201ENST00000433260 EIF3GO75821 320 aaKnown RBP eCLIP4.21□□□□□ -1.74
HMGB3P24-201ENST00000433260 GIG44P09565 113 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P24-201ENST00000433260 PET100P0DJ07 73 aa4.21□□□□□ -1.74
HMGB3P24-201ENST00000433260 C4BPBP20851 252 aa4.21□□□□□ -1.74
HMGB3P24-201ENST00000433260 PSMB3P49720 205 aa4.21□□□□□ -1.74
HMGB3P24-201ENST00000433260 MEOX2P50222 304 aa4.21□□□□□ -1.74
HMGB3P24-201ENST00000433260 OPCMLQ14982 345 aa4.21□□□□□ -1.74
HMGB3P24-201ENST00000433260 TOR2AQ5JU69 321 aa4.21□□□□□ -1.74
HMGB3P24-201ENST00000433260 CASC10Q5T4H9 136 aa4.21□□□□□ -1.74
HMGB3P24-201ENST00000433260 PXDC1Q5TGL8 231 aa4.21□□□□□ -1.74
HMGB3P24-201ENST00000433260 FAM78BQ5VT40 261 aa4.21□□□□□ -1.74
HMGB3P24-201ENST00000433260 MORN3Q6PF18 240 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P24-201ENST00000433260 S100A7AQ86SG5 101 aa4.21□□□□□ -1.74
HMGB3P24-201ENST00000433260 BPIFA4PQ86YQ2 179 aa4.21□□□□□ -1.74
HMGB3P24-201ENST00000433260 ZNF709Q8N972 641 aa4.21□□□□□ -1.74
HMGB3P24-201ENST00000433260 OR1L4Q8NGR5 311 aa4.21□□□□□ -1.74
HMGB3P24-201ENST00000433260 PFDN5Q99471 154 aa4.21□□□□□ -1.74
HMGB3P24-201ENST00000433260 ATP5SQ99766 215 aa4.21□□□□□ -1.74
HMGB3P24-201ENST00000433260 WDR61Q9GZS3 305 aaKnown RBP4.21□□□□□ -1.74
HMGB3P24-201ENST00000433260 SAV1Q9H4B6 383 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P24-201ENST00000433260 WFDC1Q9HC57 220 aa4.21□□□□□ -1.74
HMGB3P24-201ENST00000433260 SEPSECSQ9HD40 501 aaKnown RBP4.21□□□□□ -1.74
HMGB3P24-201ENST00000433260 HSPB11Q9Y547 144 aa4.21□□□□□ -1.74
HMGB3P24-201ENST00000433260 A0A0J9YX75 114 aa4.2□□□□□ -1.74
HMGB3P24-201ENST00000433260 H3BQ15 152 aa4.2□□□□□ -1.74
HMGB3P24-201ENST00000433260 MRPS12O15235 138 aaKnown RBP4.2□□□□□ -1.74
HMGB3P24-201ENST00000433260 MPDU1O75352 247 aa4.2□□□□□ -1.74
HMGB3P24-201ENST00000433260 IFNA5P01569 189 aa4.2□□□□□ -1.74
HMGB3P24-201ENST00000433260 PYYP10082 97 aa4.2□□□□□ -1.74
HMGB3P24-201ENST00000433260 SPP1P10451 314 aa4.2□□□□□ -1.74
HMGB3P24-201ENST00000433260 HLA-DRB4P13762 266 aa4.2□□□□□ -1.74
HMGB3P24-201ENST00000433260 NUTF2P61970 127 aaKnown RBP4.2□□□□□ -1.74
HMGB3P24-201ENST00000433260 RHOBP62745 196 aa4.2□□□□□ -1.74
HMGB3P24-201ENST00000433260 PMS2P11Q13670 270 aa4.2□□□□□ -1.74
HMGB3P24-201ENST00000433260 OXA1LQ15070 435 aa4.2□□□□□ -1.74
HMGB3P24-201ENST00000433260 PSG3Q16557 428 aa4.2□□□□□ -1.74
HMGB3P24-201ENST00000433260 SPATA31B1PQ5VZV4 182 aa4.2□□□□□ -1.74
HMGB3P24-201ENST00000433260 FOXI2Q6ZQN5 318 aa4.2□□□□□ -1.74
HMGB3P24-201ENST00000433260 MIR17HGQ75NE6 70 aa4.2□□□□□ -1.74
HMGB3P24-201ENST00000433260 ZNF738Q8NE65 137 aa4.2□□□□□ -1.74
HMGB3P24-201ENST00000433260 GATAD1Q8WUU5 269 aa4.2□□□□□ -1.74
HMGB3P24-201ENST00000433260 BLNKQ8WV28 456 aa4.2□□□□□ -1.74
HMGB3P24-201ENST00000433260 SLC35B3Q9H1N7 401 aa4.2□□□□□ -1.74
HMGB3P24-201ENST00000433260 PPP1R14DQ9NXH3 145 aa4.2□□□□□ -1.74
HMGB3P24-201ENST00000433260 ZNF586Q9NXT0 402 aa4.2□□□□□ -1.74
HMGB3P24-201ENST00000433260 TP53TG1Q9Y2A0 90 aa4.2□□□□□ -1.74
HMGB3P24-201ENST00000433260 HLA-DRB4X5D2U9 266 aa4.2□□□□□ -1.74
HMGB3P24-201ENST00000433260 TGP01266 2768 aa4.19□□□□□ -1.74
HMGB3P24-201ENST00000433260 A0A087X0K7 114 aa4.19□□□□□ -1.74
HMGB3P24-201ENST00000433260 CXorf65A6NEN9 183 aa4.19□□□□□ -1.74
HMGB3P24-201ENST00000433260 PRAC2D3DTV9 90 aa4.19□□□□□ -1.74
HMGB3P24-201ENST00000433260 SMLR1H3BR10 107 aa4.19□□□□□ -1.74
HMGB3P24-201ENST00000433260 SLC17A3O00476 420 aa4.19□□□□□ -1.74
HMGB3P24-201ENST00000433260 PRM2P04554 102 aa4.19□□□□□ -1.74
HMGB3P24-201ENST00000433260 OR10J4P0C629 311 aa4.19□□□□□ -1.74
HMGB3P24-201ENST00000433260 CNN1P51911 297 aaKnown RBP4.19□□□□□ -1.74
HMGB3P24-201ENST00000433260 PSG9Q00887 426 aa4.19□□□□□ -1.74
HMGB3P24-201ENST00000433260 HIST1H1AQ02539 215 aaPredicted RBP4.19□□□□□ -1.74
HMGB3P24-201ENST00000433260 SPINK13Q1W4C9 94 aa4.19□□□□□ -1.74
HMGB3P24-201ENST00000433260 FFAR4Q5NUL3 377 aa4.19□□□□□ -1.74
HMGB3P24-201ENST00000433260 HSD17B11Q8NBQ5 300 aa4.19□□□□□ -1.74
HMGB3P24-201ENST00000433260 CSNK1G2-AS1Q8NCQ2 148 aa4.19□□□□□ -1.74
HMGB3P24-201ENST00000433260 OR2T35Q8NGX2 323 aa4.19□□□□□ -1.74
HMGB3P24-201ENST00000433260 IL17DQ8TAD2 202 aa4.19□□□□□ -1.74
HMGB3P24-201ENST00000433260 RPUSD4Q96CM3 377 aaKnown RBP4.19□□□□□ -1.74
HMGB3P24-201ENST00000433260 SLC25A2Q9BXI2 301 aa4.19□□□□□ -1.74
HMGB3P24-201ENST00000433260 MFFQ9GZY8 342 aa4.19□□□□□ -1.74
HMGB3P24-201ENST00000433260 RNF24Q9Y225 148 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms