RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 TMEM109Q9BVC6 243 aa1.32□□□□□ -2.2
HMGB1P27-201ENST00000431429 LINC00470Q9BZP3 86 aa1.32□□□□□ -2.2
HMGB1P27-201ENST00000431429 FGFR1OP2Q9NVK5 253 aa1.32□□□□□ -2.2
HMGB1P27-201ENST00000431429 TXNL4BQ9NX01 149 aaKnown RBP1.32□□□□□ -2.2
HMGB1P27-201ENST00000431429 RYR1P21817 5038 aa1.31□□□□□ -2.2
HMGB1P27-201ENST00000431429 WNK2Q9Y3S1 2297 aa1.31□□□□□ -2.2
HMGB1P27-201ENST00000431429 A0A087X0T9 212 aa1.31□□□□□ -2.2
HMGB1P27-201ENST00000431429 KNCNA6PVL3 124 aa1.31□□□□□ -2.2
HMGB1P27-201ENST00000431429 EVPLLA8MZ36 301 aa1.31□□□□□ -2.2
HMGB1P27-201ENST00000431429 IGF2P01344 180 aa1.31□□□□□ -2.2
HMGB1P27-201ENST00000431429 IFI6P09912 130 aa1.31□□□□□ -2.2
HMGB1P27-201ENST00000431429 FAM228BP0C875 321 aa1.31□□□□□ -2.2
HMGB1P27-201ENST00000431429 MYL12AP19105 171 aa1.31□□□□□ -2.2
HMGB1P27-201ENST00000431429 SERPINB10P48595 397 aa1.31□□□□□ -2.2
HMGB1P27-201ENST00000431429 SRP9P49458 86 aaKnown RBP1.31□□□□□ -2.2
HMGB1P27-201ENST00000431429 NKX2-5P52952 324 aaPredicted RBP1.31□□□□□ -2.2
HMGB1P27-201ENST00000431429 TCTAP57738 103 aa1.31□□□□□ -2.2
HMGB1P27-201ENST00000431429 RAB5BP61020 215 aa1.31□□□□□ -2.2
HMGB1P27-201ENST00000431429 NAA20P61599 178 aa1.31□□□□□ -2.2
HMGB1P27-201ENST00000431429 LRRC75BQ2VPJ9 315 aa1.31□□□□□ -2.2
HMGB1P27-201ENST00000431429 CLVS2Q5SYC1 327 aa1.31□□□□□ -2.2
HMGB1P27-201ENST00000431429 C1orf195Q5TG92 126 aa1.31□□□□□ -2.2
HMGB1P27-201ENST00000431429 FAM78BQ5VT40 261 aa1.31□□□□□ -2.2
HMGB1P27-201ENST00000431429 CCDC121Q6ZUS5 278 aa1.31□□□□□ -2.2
HMGB1P27-201ENST00000431429 GRINAQ7Z429 371 aa1.31□□□□□ -2.2
HMGB1P27-201ENST00000431429 COMMD7Q86VX2 200 aa1.31□□□□□ -2.2
HMGB1P27-201ENST00000431429 BAP18Q8IXM2 172 aa1.31□□□□□ -2.2
HMGB1P27-201ENST00000431429 Q8N2B8 174 aa1.31□□□□□ -2.2
HMGB1P27-201ENST00000431429 ZNF283Q8N7M2 679 aa1.31□□□□□ -2.2
HMGB1P27-201ENST00000431429 OR4K13Q8NH42 304 aa1.31□□□□□ -2.2
HMGB1P27-201ENST00000431429 ZNF563Q8TA94 476 aa1.31□□□□□ -2.2
HMGB1P27-201ENST00000431429 STAG3L4Q8TBR4 150 aa1.31□□□□□ -2.2
HMGB1P27-201ENST00000431429 SMCR5Q8TEV8 140 aa1.31□□□□□ -2.2
HMGB1P27-201ENST00000431429 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.31□□□□□ -2.2
HMGB1P27-201ENST00000431429 SLC35G5Q96KT7 338 aa1.31□□□□□ -2.2
HMGB1P27-201ENST00000431429 CCL13Q99616 98 aa1.31□□□□□ -2.2
HMGB1P27-201ENST00000431429 MGLLQ99685 303 aa1.31□□□□□ -2.2
HMGB1P27-201ENST00000431429 Q9BRP9 147 aa1.31□□□□□ -2.2
HMGB1P27-201ENST00000431429 HRASLSQ9HDD0 168 aa1.31□□□□□ -2.2
HMGB1P27-201ENST00000431429 SLC2A9Q9NRM0 540 aa1.31□□□□□ -2.2
HMGB1P27-201ENST00000431429 ACER3Q9NUN7 267 aa1.31□□□□□ -2.2
HMGB1P27-201ENST00000431429 OPTCQ9UBM4 332 aa1.31□□□□□ -2.2
HMGB1P27-201ENST00000431429 POLR3HQ9Y535 204 aaPredicted RBP1.31□□□□□ -2.2
HMGB1P27-201ENST00000431429 CMYA5Q8N3K9 4069 aa1.31□□□□□ -2.2
HMGB1P27-201ENST00000431429 SCN3AQ9NY46 2000 aa1.3□□□□□ -2.2
HMGB1P27-201ENST00000431429 MED12LQ86YW9 2145 aa1.3□□□□□ -2.2
HMGB1P27-201ENST00000431429 A0A096LPI6 279 aa1.3□□□□□ -2.2
HMGB1P27-201ENST00000431429 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.3□□□□□ -2.2
HMGB1P27-201ENST00000431429 TRAV38-1A0A0B4J264 116 aa1.3□□□□□ -2.2
HMGB1P27-201ENST00000431429 GNG14A0A1W2PPG7 69 aa1.3□□□□□ -2.2
HMGB1P27-201ENST00000431429 TMEM235A6NFC5 223 aa1.3□□□□□ -2.2
HMGB1P27-201ENST00000431429 MIF4GDA9UHW6 222 aaKnown RBP1.3□□□□□ -2.2
HMGB1P27-201ENST00000431429 H3BUX3 64 aa1.3□□□□□ -2.2
HMGB1P27-201ENST00000431429 J3QRE1 110 aa1.3□□□□□ -2.2
HMGB1P27-201ENST00000431429 NPFFO15130 113 aa1.3□□□□□ -2.2
HMGB1P27-201ENST00000431429 OR2T1O43869 369 aa1.3□□□□□ -2.2
HMGB1P27-201ENST00000431429 IFNA5P01569 189 aa1.3□□□□□ -2.2
HMGB1P27-201ENST00000431429 ZNF728P0DKX0 622 aa1.3□□□□□ -2.2
HMGB1P27-201ENST00000431429 GUCA1AP43080 201 aaPredicted RBP1.3□□□□□ -2.2
HMGB1P27-201ENST00000431429 XCL1P47992 114 aa1.3□□□□□ -2.2
HMGB1P27-201ENST00000431429 POLR2HP52434 150 aaKnown RBP1.3□□□□□ -2.2
HMGB1P27-201ENST00000431429 KRTAP12-3P60328 96 aa1.3□□□□□ -2.2
HMGB1P27-201ENST00000431429 ARF6P62330 175 aa1.3□□□□□ -2.2
HMGB1P27-201ENST00000431429 BASP1P80723 227 aaKnown RBP1.3□□□□□ -2.2
HMGB1P27-201ENST00000431429 MYL5Q02045 173 aa1.3□□□□□ -2.2
HMGB1P27-201ENST00000431429 SAPCD1Q5SSQ6 148 aa1.3□□□□□ -2.2
HMGB1P27-201ENST00000431429 PDZD9Q8IXQ8 264 aa1.3□□□□□ -2.2
HMGB1P27-201ENST00000431429 C1orf158Q8N1D5 194 aa1.3□□□□□ -2.2
HMGB1P27-201ENST00000431429 DAND5Q8N907 189 aa1.3□□□□□ -2.2
HMGB1P27-201ENST00000431429 SLC30A7Q8NEW0 376 aa1.3□□□□□ -2.2
HMGB1P27-201ENST00000431429 OR1M1Q8NGA1 313 aa1.3□□□□□ -2.2
HMGB1P27-201ENST00000431429 RPS4Y2Q8TD47 263 aa1.3□□□□□ -2.2
HMGB1P27-201ENST00000431429 TESCQ96BS2 214 aa1.3□□□□□ -2.2
HMGB1P27-201ENST00000431429 GNPNAT1Q96EK6 184 aaPredicted RBP1.3□□□□□ -2.2
HMGB1P27-201ENST00000431429 CHMP6Q96FZ7 201 aa1.3□□□□□ -2.2
HMGB1P27-201ENST00000431429 SFRP2Q96HF1 295 aa1.3□□□□□ -2.2
HMGB1P27-201ENST00000431429 DNAJC30Q96LL9 226 aa1.3□□□□□ -2.2
HMGB1P27-201ENST00000431429 STACQ99469 402 aa1.3□□□□□ -2.2
HMGB1P27-201ENST00000431429 OR51I2Q9H344 312 aa1.3□□□□□ -2.2
HMGB1P27-201ENST00000431429 POPDC3Q9HBV1 291 aa1.3□□□□□ -2.2
HMGB1P27-201ENST00000431429 TAS2R7Q9NYW3 318 aa1.3□□□□□ -2.2
HMGB1P27-201ENST00000431429 PRO2289Q9P1D8 64 aa1.3□□□□□ -2.2
HMGB1P27-201ENST00000431429 VPS29Q9UBQ0 182 aa1.3□□□□□ -2.2
HMGB1P27-201ENST00000431429 ANAPC10Q9UM13 185 aa1.3□□□□□ -2.2
HMGB1P27-201ENST00000431429 SLC35A3Q9Y2D2 325 aa1.3□□□□□ -2.2
HMGB1P27-201ENST00000431429 NOP16Q9Y3C1 178 aaKnown RBP1.3□□□□□ -2.2
HMGB1P27-201ENST00000431429 SOX21Q9Y651 276 aaPredicted RBP1.3□□□□□ -2.2
HMGB1P27-201ENST00000431429 CSMD3Q7Z407 3707 aa1.3□□□□□ -2.2
HMGB1P27-201ENST00000431429 LYSTQ99698 3801 aa1.3□□□□□ -2.2
HMGB1P27-201ENST00000431429 KIAA2026Q5HYC2 2103 aa1.3□□□□□ -2.2
HMGB1P27-201ENST00000431429 NCKAP5O14513 1909 aa1.29□□□□□ -2.2
HMGB1P27-201ENST00000431429 EXPH5Q8NEV8 1989 aa1.29□□□□□ -2.2
HMGB1P27-201ENST00000431429 A0A1B0GW54 56 aa1.29□□□□□ -2.2
HMGB1P27-201ENST00000431429 DISC1C4P0D8 188 aa1.29□□□□□ -2.2
HMGB1P27-201ENST00000431429 LY6LH3BQJ8 138 aa1.29□□□□□ -2.2
HMGB1P27-201ENST00000431429 M0QZK8 103 aa1.29□□□□□ -2.2
HMGB1P27-201ENST00000431429 M0R1W7 72 aa1.29□□□□□ -2.2
HMGB1P27-201ENST00000431429 GNRH2O43555 120 aa1.29□□□□□ -2.2
HMGB1P27-201ENST00000431429 E2F6O75461 281 aa1.29□□□□□ -2.2
HMGB1P27-201ENST00000431429 CRTAPO75718 401 aaPredicted RBP1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms