RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 C16orf92Q96LL3 132 aa8.25□□□□□ -1.09
CHD4-202ENST00000430771 TMEM167BQ9NRX6 74 aa8.25□□□□□ -1.09
CHD4-202ENST00000430771 MGAM2Q2M2H8 2515 aa8.25□□□□□ -1.09
CHD4-202ENST00000430771 NOTCH3Q9UM47 2321 aa8.24□□□□□ -1.09
CHD4-202ENST00000430771 OR11H12B2RN74 326 aa8.24□□□□□ -1.09
CHD4-202ENST00000430771 SOCS3O14543 225 aa8.24□□□□□ -1.09
CHD4-202ENST00000430771 HMGB3O15347 200 aaKnown RBP8.24□□□□□ -1.09
CHD4-202ENST00000430771 OR10J4P0C629 311 aa8.24□□□□□ -1.09
CHD4-202ENST00000430771 PSG9Q00887 426 aa8.24□□□□□ -1.09
CHD4-202ENST00000430771 ZNF726P1Q15940 193 aa8.24□□□□□ -1.09
CHD4-202ENST00000430771 SSX7Q7RTT5 188 aa8.24□□□□□ -1.09
CHD4-202ENST00000430771 IQCF2Q8IXL9 164 aa8.24□□□□□ -1.09
CHD4-202ENST00000430771 RNF141Q8WVD5 230 aa8.24□□□□□ -1.09
CHD4-202ENST00000430771 FXYD5Q96DB9 178 aa8.24□□□□□ -1.09
CHD4-202ENST00000430771 FAM110AQ9BQ89 295 aa8.24□□□□□ -1.09
CHD4-202ENST00000430771 AAMDCQ9H7C9 122 aa8.24□□□□□ -1.09
CHD4-202ENST00000430771 CLEC5AQ9NY25 188 aa8.24□□□□□ -1.09
CHD4-202ENST00000430771 SMAD5-AS1Q9Y6J3 95 aa8.24□□□□□ -1.09
CHD4-202ENST00000430771 TRBV19A0A075B6N1 114 aa8.23□□□□□ -1.09
CHD4-202ENST00000430771 ZNF705EA8MWA4 302 aaPredicted RBP8.23□□□□□ -1.09
CHD4-202ENST00000430771 EIF3GO75821 320 aaKnown RBP eCLIP8.23□□□□□ -1.09
CHD4-202ENST00000430771 IFNA7P01567 189 aa8.23□□□□□ -1.09
CHD4-202ENST00000430771 HBE1P02100 147 aa8.23□□□□□ -1.09
CHD4-202ENST00000430771 H2AFB1P0C5Y9 115 aa8.23□□□□□ -1.09
CHD4-202ENST00000430771 NBEAP1P0C6P0 100 aa8.23□□□□□ -1.09
CHD4-202ENST00000430771 ZNF688P0C7X2 276 aa8.23□□□□□ -1.09
CHD4-202ENST00000430771 GCHFRP30047 84 aa8.23□□□□□ -1.09
CHD4-202ENST00000430771 FHITP49789 147 aa8.23□□□□□ -1.09
CHD4-202ENST00000430771 KRTAP10-11P60412 298 aa8.23□□□□□ -1.09
CHD4-202ENST00000430771 FAM74A1Q5RGS3 127 aa8.23□□□□□ -1.09
CHD4-202ENST00000430771 BLNKQ8WV28 456 aa8.23□□□□□ -1.09
CHD4-202ENST00000430771 ZNF503Q96F45 646 aa8.23□□□□□ -1.09
CHD4-202ENST00000430771 PRR25Q96S07 402 aa8.23□□□□□ -1.09
CHD4-202ENST00000430771 MAP6D1Q9H9H5 199 aa8.23□□□□□ -1.09
CHD4-202ENST00000430771 ZNF331Q9NQX6 463 aaPredicted RBP8.23□□□□□ -1.09
CHD4-202ENST00000430771 ZNF586Q9NXT0 402 aa8.23□□□□□ -1.09
CHD4-202ENST00000430771 DNAH3Q8TD57 4116 aa8.23□□□□□ -1.09
CHD4-202ENST00000430771 SORL1Q92673 2214 aa8.22□□□□□ -1.09
CHD4-202ENST00000430771 H3BQ15 152 aa8.22□□□□□ -1.09
CHD4-202ENST00000430771 H3BTX0 84 aa8.22□□□□□ -1.09
CHD4-202ENST00000430771 SLC17A3O00476 420 aa8.22□□□□□ -1.09
CHD4-202ENST00000430771 PPT1P50897 306 aa8.22□□□□□ -1.09
CHD4-202ENST00000430771 BLOC1S1P78537 153 aa8.22□□□□□ -1.09
CHD4-202ENST00000430771 ODF3L2Q3SX64 289 aa8.22□□□□□ -1.09
CHD4-202ENST00000430771 PSMG4Q5JS54 123 aa8.22□□□□□ -1.09
CHD4-202ENST00000430771 TEX261Q6UWH6 196 aa8.22□□□□□ -1.09
CHD4-202ENST00000430771 SFT2D1Q8WV19 159 aa8.22□□□□□ -1.09
CHD4-202ENST00000430771 MBD3L1Q8WWY6 194 aa8.22□□□□□ -1.09
CHD4-202ENST00000430771 PLA2G2EQ9NZK7 142 aa8.22□□□□□ -1.09
CHD4-202ENST00000430771 SNRPCP09234 159 aaKnown RBP8.21□□□□□ -1.1
CHD4-202ENST00000430771 CD7P09564 240 aa8.21□□□□□ -1.1
CHD4-202ENST00000430771 FGF8P55075 233 aaPredicted RBP8.21□□□□□ -1.1
CHD4-202ENST00000430771 DEFB131AP59861 70 aa8.21□□□□□ -1.1
CHD4-202ENST00000430771 LYPD1Q8N2G4 141 aa8.21□□□□□ -1.1
CHD4-202ENST00000430771 FAM24BQ8N5W8 94 aa8.21□□□□□ -1.1
CHD4-202ENST00000430771 MRPL53Q96EL3 112 aaKnown RBP8.21□□□□□ -1.1
CHD4-202ENST00000430771 C17orf77Q96MU5 243 aa8.21□□□□□ -1.1
CHD4-202ENST00000430771 LINC00052Q96N35 136 aa8.21□□□□□ -1.1
CHD4-202ENST00000430771 AURKAIP1Q9NWT8 199 aaPredicted RBP8.21□□□□□ -1.1
CHD4-202ENST00000430771 UBQLN2Q9UHD9 624 aa8.21□□□□□ -1.1
CHD4-202ENST00000430771 PRELID1Q9Y255 219 aa8.21□□□□□ -1.1
CHD4-202ENST00000430771 ARL2-SNX15V9GYD0 113 aa8.21□□□□□ -1.1
CHD4-202ENST00000430771 TRAV8-2A0A0B4J237 113 aa8.2□□□□□ -1.1
CHD4-202ENST00000430771 TRAV1-1A0A0B4J248 108 aa8.2□□□□□ -1.1
CHD4-202ENST00000430771 ZNF738Q8NE65 137 aa8.2□□□□□ -1.1
CHD4-202ENST00000430771 SUN5Q8TC36 379 aa8.2□□□□□ -1.1
CHD4-202ENST00000430771 SAT2Q96F10 170 aaPredicted RBP8.2□□□□□ -1.1
CHD4-202ENST00000430771 Q9H3A6 140 aa8.2□□□□□ -1.1
CHD4-202ENST00000430771 A0A1B0GV50 99 aa8.19□□□□□ -1.1
CHD4-202ENST00000430771 NDUFB4O95168 129 aa8.19□□□□□ -1.1
CHD4-202ENST00000430771 IFNA1P01562 189 aa8.19□□□□□ -1.1
CHD4-202ENST00000430771 CSN1S1P47710 185 aa8.19□□□□□ -1.1
CHD4-202ENST00000430771 PSG3Q16557 428 aa8.19□□□□□ -1.1
CHD4-202ENST00000430771 EBLN2Q6P2I7 272 aa8.19□□□□□ -1.1
CHD4-202ENST00000430771 FOXI2Q6ZQN5 318 aa8.19□□□□□ -1.1
CHD4-202ENST00000430771 RNF182Q8N6D2 247 aa8.19□□□□□ -1.1
CHD4-202ENST00000430771 ZNF680Q8NEM1 530 aa8.19□□□□□ -1.1
CHD4-202ENST00000430771 CMTM2Q8TAZ6 248 aa8.19□□□□□ -1.1
CHD4-202ENST00000430771 NKX6-2Q9C056 277 aaPredicted RBP8.19□□□□□ -1.1
CHD4-202ENST00000430771 SRD5A3Q9H8P0 318 aa8.19□□□□□ -1.1
CHD4-202ENST00000430771 MANBALQ9NQG1 85 aa8.19□□□□□ -1.1
CHD4-202ENST00000430771 OTORQ9NRC9 128 aa8.19□□□□□ -1.1
CHD4-202ENST00000430771 A0A1W2PRE2 83 aa8.18□□□□□ -1.1
CHD4-202ENST00000430771 RANP62826 216 aaKnown RBP8.18□□□□□ -1.1
CHD4-202ENST00000430771 ICAM4Q14773 271 aa8.18□□□□□ -1.1
CHD4-202ENST00000430771 IGFL4Q6B9Z1 124 aa8.18□□□□□ -1.1
CHD4-202ENST00000430771 ZNF767PQ75MW2 155 aa8.18□□□□□ -1.1
CHD4-202ENST00000430771 EXOC3-AS1Q8N2X6 119 aa8.18□□□□□ -1.1
CHD4-202ENST00000430771 RXFP4Q8TDU9 374 aa8.18□□□□□ -1.1
CHD4-202ENST00000430771 C20orf173Q96LM9 149 aa8.18□□□□□ -1.1
CHD4-202ENST00000430771 WFDC10AQ9H1F0 79 aa8.18□□□□□ -1.1
CHD4-202ENST00000430771 TMPRSS5Q9H3S3 457 aa8.18□□□□□ -1.1
CHD4-202ENST00000430771 C19orf73Q9NVV2 129 aa8.18□□□□□ -1.1
CHD4-202ENST00000430771 NBEAL1Q6ZS30 2694 aa8.18□□□□□ -1.1
CHD4-202ENST00000430771 HLA-DRB4P13762 266 aa8.17□□□□□ -1.1
CHD4-202ENST00000430771 HLA-DMBP28068 263 aa8.17□□□□□ -1.1
CHD4-202ENST00000430771 TAGLN2P37802 199 aaKnown RBP8.17□□□□□ -1.1
CHD4-202ENST00000430771 UBE2G2P60604 165 aa8.17□□□□□ -1.1
CHD4-202ENST00000430771 APRG1Q8IVJ8 170 aa8.17□□□□□ -1.1
CHD4-202ENST00000430771 STHQ8IWL8 128 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms