RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 RNF125Q96EQ8 232 aa11.02□□□□□ -0.65
SGMS1-203ENST00000429490 CST9LQ9H4G1 147 aa11.02□□□□□ -0.65
SGMS1-203ENST00000429490 ITGB1BP1O14713 200 aa11.01□□□□□ -0.65
SGMS1-203ENST00000429490 S100A4P26447 101 aaKnown RBP11.01□□□□□ -0.65
SGMS1-203ENST00000429490 RBPJQ06330 500 aa11.01□□□□□ -0.65
SGMS1-203ENST00000429490 ORMDL3Q8N138 153 aa11.01□□□□□ -0.65
SGMS1-203ENST00000429490 TRAV30A0A087WSZ9 112 aa11.01□□□□□ -0.65
SGMS1-203ENST00000429490 TMEM178BH3BS89 294 aa11.01□□□□□ -0.65
SGMS1-203ENST00000429490 CTRLP40313 264 aa11.01□□□□□ -0.65
SGMS1-203ENST00000429490 TMEM160Q9NX00 188 aa11.01□□□□□ -0.65
SGMS1-203ENST00000429490 SIGLEC9Q9Y336 463 aa11.01□□□□□ -0.65
SGMS1-203ENST00000429490 SOX21Q9Y651 276 aaPredicted RBP11.01□□□□□ -0.65
SGMS1-203ENST00000429490 C2CD3Q4AC94 2353 aa11.01□□□□□ -0.65
SGMS1-203ENST00000429490 MBD3L4A6NDZ8 208 aaPredicted RBP11.01□□□□□ -0.65
SGMS1-203ENST00000429490 MBD3L3A6NE82 208 aaPredicted RBP11.01□□□□□ -0.65
SGMS1-203ENST00000429490 MBD3L5A6NJ08 208 aaPredicted RBP11.01□□□□□ -0.65
SGMS1-203ENST00000429490 TIMM23O14925 209 aa11.01□□□□□ -0.65
SGMS1-203ENST00000429490 TMEM30BQ3MIR4 351 aa11.01□□□□□ -0.65
SGMS1-203ENST00000429490 MBD3L2Q8NHZ7 208 aaPredicted RBP11.01□□□□□ -0.65
SGMS1-203ENST00000429490 RNASE6Q93091 150 aaKnown RBP11.01□□□□□ -0.65
SGMS1-203ENST00000429490 SORL1Q92673 2214 aa11□□□□□ -0.65
SGMS1-203ENST00000429490 LHBP01229 141 aa11□□□□□ -0.65
SGMS1-203ENST00000429490 ZNF833PQ6ZTB9 187 aa11□□□□□ -0.65
SGMS1-203ENST00000429490 C2orf70A6NJV1 201 aa11□□□□□ -0.65
SGMS1-203ENST00000429490 BVES-AS1Q5T3Y7 98 aa11□□□□□ -0.65
SGMS1-203ENST00000429490 TRGV9Q99603 122 aa11□□□□□ -0.65
SGMS1-203ENST00000429490 FAM215AQ9Y5M1 114 aa11□□□□□ -0.65
SGMS1-203ENST00000429490 PTPRQQ9UMZ3 2332 aa11□□□□□ -0.65
SGMS1-203ENST00000429490 C8orf49Q96NF6 230 aa10.99□□□□□ -0.65
SGMS1-203ENST00000429490 FABP2P12104 132 aa10.99□□□□□ -0.65
SGMS1-203ENST00000429490 SEM1Q6ZVN7 128 aa10.99□□□□□ -0.65
SGMS1-203ENST00000429490 Q8N976 141 aa10.99□□□□□ -0.65
SGMS1-203ENST00000429490 DEFB104AQ8WTQ1 72 aa10.99□□□□□ -0.65
SGMS1-203ENST00000429490 SPCS1Q9Y6A9 102 aa10.99□□□□□ -0.65
SGMS1-203ENST00000429490 NCOR2Q9Y618 2525 aa10.99□□□□□ -0.65
SGMS1-203ENST00000429490 IGLV3-9A0A075B6K5 115 aa10.98□□□□□ -0.65
SGMS1-203ENST00000429490 MFAP4P55083 255 aa10.98□□□□□ -0.65
SGMS1-203ENST00000429490 OCIAD2Q56VL3 154 aa10.98□□□□□ -0.65
SGMS1-203ENST00000429490 SFTA2Q6UW10 78 aa10.98□□□□□ -0.65
SGMS1-203ENST00000429490 IFI27L1Q96BM0 104 aa10.98□□□□□ -0.65
SGMS1-203ENST00000429490 IGHV1-3A0A0C4DH29 117 aa10.98□□□□□ -0.65
SGMS1-203ENST00000429490 FAM231BA6NCW3 169 aa10.98□□□□□ -0.65
SGMS1-203ENST00000429490 CGB3P0DN86 165 aa10.98□□□□□ -0.65
SGMS1-203ENST00000429490 CGB7P0DN87 165 aa10.98□□□□□ -0.65
SGMS1-203ENST00000429490 MAP1LC3AQ9H492 121 aa10.98□□□□□ -0.65
SGMS1-203ENST00000429490 VWC2LB2RUY7 222 aa10.98□□□□□ -0.65
SGMS1-203ENST00000429490 K7EM74 188 aa10.98□□□□□ -0.65
SGMS1-203ENST00000429490 SPANXN1Q5VSR9 72 aa10.98□□□□□ -0.65
SGMS1-203ENST00000429490 CEACAM3P40198 252 aa10.97□□□□□ -0.65
SGMS1-203ENST00000429490 KLRD1Q13241 179 aa10.97□□□□□ -0.65
SGMS1-203ENST00000429490 FER1L6-AS1Q8NA97 138 aa10.97□□□□□ -0.65
SGMS1-203ENST00000429490 OR2K2Q8NGT1 345 aa10.97□□□□□ -0.65
SGMS1-203ENST00000429490 FOXC2Q99958 501 aa10.97□□□□□ -0.65
SGMS1-203ENST00000429490 COL25A1Q9BXS0 654 aaPredicted RBP10.97□□□□□ -0.65
SGMS1-203ENST00000429490 GATA4P43694 442 aa10.97□□□□□ -0.65
SGMS1-203ENST00000429490 SPATA12Q7Z6I5 190 aa10.97□□□□□ -0.65
SGMS1-203ENST00000429490 ABHD17AQ96GS6 310 aa10.97□□□□□ -0.65
SGMS1-203ENST00000429490 DMXL1Q9Y485 3027 aa10.97□□□□□ -0.65
SGMS1-203ENST00000429490 CTSZQ9UBR2 303 aa10.97□□□□□ -0.65
SGMS1-203ENST00000429490 LOXP28300 417 aaPredicted RBP10.96□□□□□ -0.65
SGMS1-203ENST00000429490 TMEM75Q8N9X5 138 aa10.96□□□□□ -0.65
SGMS1-203ENST00000429490 NHP2Q9NX24 153 aaKnown RBP10.96□□□□□ -0.65
SGMS1-203ENST00000429490 ADAMTS20P59510 1910 aa10.96□□□□□ -0.65
SGMS1-203ENST00000429490 IGKV1D-37A0A075B6S9 117 aa10.96□□□□□ -0.65
SGMS1-203ENST00000429490 HBDP02042 147 aa10.96□□□□□ -0.65
SGMS1-203ENST00000429490 LEPP41159 167 aa10.96□□□□□ -0.65
SGMS1-203ENST00000429490 FAM57AQ8TBR7 257 aa10.96□□□□□ -0.65
SGMS1-203ENST00000429490 WIPF2Q8TF74 440 aaPredicted RBP10.96□□□□□ -0.65
SGMS1-203ENST00000429490 CACNA1AO00555 2505 aa10.96□□□□□ -0.66
SGMS1-203ENST00000429490 IGHV2-70DA0A0C4DH43 119 aa10.96□□□□□ -0.66
SGMS1-203ENST00000429490 A0A0G2JNJ9 132 aa10.96□□□□□ -0.66
SGMS1-203ENST00000429490 FAM120AOSQ5T036 256 aa10.96□□□□□ -0.66
SGMS1-203ENST00000429490 Q9UFV3 132 aa10.96□□□□□ -0.66
SGMS1-203ENST00000429490 RPL7P18124 248 aaKnown RBP10.95□□□□□ -0.66
SGMS1-203ENST00000429490 BMI1P35226 326 aa10.95□□□□□ -0.66
SGMS1-203ENST00000429490 C21orf62Q9NYP8 219 aa10.95□□□□□ -0.66
SGMS1-203ENST00000429490 FOXC1Q12948 553 aa10.95□□□□□ -0.66
SGMS1-203ENST00000429490 KLF5Q13887 457 aaPredicted RBP10.95□□□□□ -0.66
SGMS1-203ENST00000429490 KIR3DS1Q14943 382 aa10.95□□□□□ -0.66
SGMS1-203ENST00000429490 RUSC1-AS1Q66K80 236 aa10.95□□□□□ -0.66
SGMS1-203ENST00000429490 MYOZ3Q8TDC0 251 aa10.95□□□□□ -0.66
SGMS1-203ENST00000429490 MBD6Q96DN6 1003 aa10.95□□□□□ -0.66
SGMS1-203ENST00000429490 MS4A6AQ9H2W1 248 aa10.95□□□□□ -0.66
SGMS1-203ENST00000429490 A0A0G2JLM5 398 aa10.95□□□□□ -0.66
SGMS1-203ENST00000429490 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.95□□□□□ -0.66
SGMS1-203ENST00000429490 CD5LO43866 347 aa10.95□□□□□ -0.66
SGMS1-203ENST00000429490 GTSCR1Q86UQ5 136 aa10.95□□□□□ -0.66
SGMS1-203ENST00000429490 RABAC1Q9UI14 185 aa10.95□□□□□ -0.66
SGMS1-203ENST00000429490 FAM106CPP0CH98 169 aa10.94□□□□□ -0.66
SGMS1-203ENST00000429490 CR1LQ2VPA4 569 aa10.94□□□□□ -0.66
SGMS1-203ENST00000429490 FAM106AQ4KMX7 169 aa10.94□□□□□ -0.66
SGMS1-203ENST00000429490 TAX1BP3O14907 124 aa10.94□□□□□ -0.66
SGMS1-203ENST00000429490 SH2D1AO60880 128 aa10.94□□□□□ -0.66
SGMS1-203ENST00000429490 SAP30O75446 220 aa10.94□□□□□ -0.66
SGMS1-203ENST00000429490 MGPP08493 103 aa10.94□□□□□ -0.66
SGMS1-203ENST00000429490 IGLC1P0CG04 106 aa10.94□□□□□ -0.66
SGMS1-203ENST00000429490 SCGB1D4Q6XE38 83 aa10.94□□□□□ -0.66
SGMS1-203ENST00000429490 Q71RC1 249 aaPredicted RBP10.94□□□□□ -0.66
SGMS1-203ENST00000429490 TTTY13Q9BZ97 58 aa10.94□□□□□ -0.66
SGMS1-203ENST00000429490 DPM3Q9P2X0 92 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms