RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 CRIM1Q9NZV1 1036 aa10.36□□□□□ -0.75
LDB3-205ENST00000429277 Q8TAT8 98 aa10.36□□□□□ -0.75
LDB3-205ENST00000429277 TMEM141Q96I45 108 aa10.36□□□□□ -0.75
LDB3-205ENST00000429277 NYNRINQ9P2P1 1898 aaKnown RBP10.36□□□□□ -0.75
LDB3-205ENST00000429277 OVOL3O00110 214 aa10.36□□□□□ -0.75
LDB3-205ENST00000429277 AKAP6Q13023 2319 aa10.36□□□□□ -0.75
LDB3-205ENST00000429277 PRIMA1Q86XR5 153 aa10.36□□□□□ -0.75
LDB3-205ENST00000429277 GREB1Q4ZG55 1949 aa10.36□□□□□ -0.75
LDB3-205ENST00000429277 HGFACQ04756 655 aa10.36□□□□□ -0.75
LDB3-205ENST00000429277 DEFB121Q5J5C9 76 aa10.36□□□□□ -0.75
LDB3-205ENST00000429277 C3orf56Q8N813 242 aa10.36□□□□□ -0.75
LDB3-205ENST00000429277 VWC2LB2RUY7 222 aa10.35□□□□□ -0.75
LDB3-205ENST00000429277 C2orf82Q6UX34 121 aa10.35□□□□□ -0.75
LDB3-205ENST00000429277 IGHV3-73A0A0B4J1V6 119 aa10.35□□□□□ -0.75
LDB3-205ENST00000429277 LINC01619G3V211 115 aa10.35□□□□□ -0.75
LDB3-205ENST00000429277 LYPD2Q6UXB3 125 aa10.35□□□□□ -0.75
LDB3-205ENST00000429277 LINC00311Q8N616 119 aa10.35□□□□□ -0.75
LDB3-205ENST00000429277 MCRIP2Q9BUT9 160 aaKnown RBP10.35□□□□□ -0.75
LDB3-205ENST00000429277 IGHV1-69DA0A0B4J2H0 117 aa10.35□□□□□ -0.75
LDB3-205ENST00000429277 IGHV1-69P01742 117 aa10.35□□□□□ -0.75
LDB3-205ENST00000429277 SPANXA1Q9NS26 97 aa10.35□□□□□ -0.75
LDB3-205ENST00000429277 FREM3P0C091 2139 aa10.34□□□□□ -0.75
LDB3-205ENST00000429277 A0A1W2PPI3 338 aa10.34□□□□□ -0.75
LDB3-205ENST00000429277 C3orf79P0CE67 100 aa10.34□□□□□ -0.75
LDB3-205ENST00000429277 ZC2HC1BQ5TFG8 222 aa10.34□□□□□ -0.75
LDB3-205ENST00000429277 ZFAND6Q6FIF0 208 aa10.34□□□□□ -0.75
LDB3-205ENST00000429277 TMEM14BQ9NUH8 114 aa10.34□□□□□ -0.75
LDB3-205ENST00000429277 SSBP2P81877 361 aaPredicted RBP10.34□□□□□ -0.75
LDB3-205ENST00000429277 ARMS2P0C7Q2 107 aa10.34□□□□□ -0.75
LDB3-205ENST00000429277 CEACAM8P31997 349 aaPredicted RBP10.34□□□□□ -0.75
LDB3-205ENST00000429277 DEFB131AP59861 70 aa10.34□□□□□ -0.75
LDB3-205ENST00000429277 GBF1Q92538 1859 aa10.34□□□□□ -0.75
LDB3-205ENST00000429277 TRPM7Q96QT4 1865 aa10.34□□□□□ -0.75
LDB3-205ENST00000429277 THADAQ6YHU6 1953 aa10.34□□□□□ -0.75
LDB3-205ENST00000429277 IGHV3-53P01767 116 aa10.34□□□□□ -0.75
LDB3-205ENST00000429277 PFN1P07737 140 aaKnown RBP10.34□□□□□ -0.75
LDB3-205ENST00000429277 SYNJ2BPP57105 145 aa10.34□□□□□ -0.75
LDB3-205ENST00000429277 SRSF2Q01130 221 aaKnown RBP10.34□□□□□ -0.75
LDB3-205ENST00000429277 PRSS46E5RG02 174 aa10.33□□□□□ -0.76
LDB3-205ENST00000429277 Q0VG73 95 aa10.33□□□□□ -0.76
LDB3-205ENST00000429277 UBE2E2Q96LR5 201 aa10.33□□□□□ -0.76
LDB3-205ENST00000429277 CNOT1A5YKK6 2376 aaKnown RBP10.33□□□□□ -0.76
LDB3-205ENST00000429277 TNFRSF6BO95407 300 aa10.33□□□□□ -0.76
LDB3-205ENST00000429277 ZNF833PQ6ZTB9 187 aa10.33□□□□□ -0.76
LDB3-205ENST00000429277 CHAC1Q9BUX1 264 aa10.33□□□□□ -0.76
LDB3-205ENST00000429277 ANAPC10Q9UM13 185 aa10.33□□□□□ -0.76
LDB3-205ENST00000429277 SP5Q6BEB4 398 aaPredicted RBP10.32□□□□□ -0.76
LDB3-205ENST00000429277 NDUFA4L2Q9NRX3 87 aa10.32□□□□□ -0.76
LDB3-205ENST00000429277 TRAV13-1A0A0B4J241 112 aa10.32□□□□□ -0.76
LDB3-205ENST00000429277 IGHV2-70DA0A0C4DH43 119 aa10.32□□□□□ -0.76
LDB3-205ENST00000429277 NDUFA4O00483 81 aa10.32□□□□□ -0.76
LDB3-205ENST00000429277 TRBV25-1A0A075B6N4 114 aa10.32□□□□□ -0.76
LDB3-205ENST00000429277 A6NNC1 897 aa10.32□□□□□ -0.76
LDB3-205ENST00000429277 IGKV1-16P04430 117 aa10.32□□□□□ -0.76
LDB3-205ENST00000429277 ESDP10768 282 aa10.32□□□□□ -0.76
LDB3-205ENST00000429277 AMN1Q8IY45 258 aa10.32□□□□□ -0.76
LDB3-205ENST00000429277 C5orf63A6NC05 138 aa10.32□□□□□ -0.76
LDB3-205ENST00000429277 INS-IGF2F8WCM5 200 aa10.32□□□□□ -0.76
LDB3-205ENST00000429277 ATP6V0E1O15342 81 aa10.32□□□□□ -0.76
LDB3-205ENST00000429277 LHFPL4Q7Z7J7 247 aa10.32□□□□□ -0.76
LDB3-205ENST00000429277 SPANXDQ9BXN6 97 aa10.32□□□□□ -0.76
LDB3-205ENST00000429277 TRAV8-1A0A0A6YYK1 113 aa10.31□□□□□ -0.76
LDB3-205ENST00000429277 RMI2Q96E14 147 aa10.31□□□□□ -0.76
LDB3-205ENST00000429277 CD5LO43866 347 aa10.31□□□□□ -0.76
LDB3-205ENST00000429277 APOC4P55056 127 aa10.31□□□□□ -0.76
LDB3-205ENST00000429277 FXYD7P58549 80 aa10.31□□□□□ -0.76
LDB3-205ENST00000429277 REG4Q9BYZ8 158 aa10.31□□□□□ -0.76
LDB3-205ENST00000429277 TMEM14CQ9P0S9 112 aa10.31□□□□□ -0.76
LDB3-205ENST00000429277 Q5PR19 223 aa10.31□□□□□ -0.76
LDB3-205ENST00000429277 A0A0G2JRQ6 117 aa10.3□□□□□ -0.76
LDB3-205ENST00000429277 H3BMM0 161 aa10.3□□□□□ -0.76
LDB3-205ENST00000429277 I3L3M4 83 aa10.3□□□□□ -0.76
LDB3-205ENST00000429277 INAFM2P0DMQ5 153 aa10.3□□□□□ -0.76
LDB3-205ENST00000429277 DAD1P61803 113 aa10.3□□□□□ -0.76
LDB3-205ENST00000429277 ARHGEF17Q96PE2 2063 aaPredicted RBP10.3□□□□□ -0.76
LDB3-205ENST00000429277 CFHR2P36980 270 aa10.3□□□□□ -0.76
LDB3-205ENST00000429277 HIST1H4AP62805 103 aaKnown RBP10.3□□□□□ -0.76
LDB3-205ENST00000429277 Q8N8P6 123 aa10.3□□□□□ -0.76
LDB3-205ENST00000429277 TRBV19A0A075B6N1 114 aa10.3□□□□□ -0.76
LDB3-205ENST00000429277 A0A087WWL8 130 aa10.3□□□□□ -0.76
LDB3-205ENST00000429277 ZNF561-AS1K7EIQ3 104 aa10.3□□□□□ -0.76
LDB3-205ENST00000429277 DEFB130BP0DP73 79 aa10.3□□□□□ -0.76
LDB3-205ENST00000429277 DEFB130AP0DP74 79 aa10.3□□□□□ -0.76
LDB3-205ENST00000429277 TEX36Q5VZQ5 186 aa10.3□□□□□ -0.76
LDB3-205ENST00000429277 E9PQ18 207 aa10.3□□□□□ -0.76
LDB3-205ENST00000429277 Q6ZRM9 215 aa10.3□□□□□ -0.76
LDB3-205ENST00000429277 TMEM256Q8N2U0 113 aa10.3□□□□□ -0.76
LDB3-205ENST00000429277 H3BUA1 57 aa10.29□□□□□ -0.76
LDB3-205ENST00000429277 KLHDC3Q9BQ90 382 aa10.29□□□□□ -0.76
LDB3-205ENST00000429277 IGHV1OR15-1A0A075B7D0 117 aa10.29□□□□□ -0.76
LDB3-205ENST00000429277 FAM231DQ6ZW35 169 aa10.29□□□□□ -0.76
LDB3-205ENST00000429277 hDV102S1A0JD36 115 aa10.29□□□□□ -0.76
LDB3-205ENST00000429277 RNF223E7ERA6 249 aa10.29□□□□□ -0.76
LDB3-205ENST00000429277 FAM104BQ5XKR9 115 aa10.29□□□□□ -0.76
LDB3-205ENST00000429277 NPC2P61916 151 aa10.29□□□□□ -0.76
LDB3-205ENST00000429277 MST1LQ2TV78 715 aa10.29□□□□□ -0.76
LDB3-205ENST00000429277 DMRTC2Q8IXT2 367 aaPredicted RBP10.29□□□□□ -0.76
LDB3-205ENST00000429277 SPXQ9BT56 116 aa10.29□□□□□ -0.76
LDB3-205ENST00000429277 SPTBN1Q01082 2364 aaKnown RBP10.28□□□□□ -0.76
LDB3-205ENST00000429277 KIR3DS1Q14943 382 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms