RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 SIGLEC15Q6ZMC9 328 aa6.73□□□□□ -1.33
SMC6-204ENST00000428868 C1QL4Q86Z23 238 aa6.73□□□□□ -1.33
SMC6-204ENST00000428868 DERL1Q9BUN8 251 aa6.73□□□□□ -1.33
SMC6-204ENST00000428868 RHPN1-AS1Q9BWJ2 59 aa6.73□□□□□ -1.33
SMC6-204ENST00000428868 Q9H3A6 140 aa6.73□□□□□ -1.33
SMC6-204ENST00000428868 DAZ1Q9NQZ3 744 aaKnown RBP6.73□□□□□ -1.33
SMC6-204ENST00000428868 SMPXQ9UHP9 88 aa6.73□□□□□ -1.33
SMC6-204ENST00000428868 SORL1Q92673 2214 aa6.72□□□□□ -1.33
SMC6-204ENST00000428868 NBEAL1Q6ZS30 2694 aa6.72□□□□□ -1.33
SMC6-204ENST00000428868 VWFP04275 2813 aa6.72□□□□□ -1.33
SMC6-204ENST00000428868 IGKV3-7A0A075B6H7 116 aa6.72□□□□□ -1.33
SMC6-204ENST00000428868 A0A087X0K7 114 aa6.72□□□□□ -1.33
SMC6-204ENST00000428868 A0A1W2PRE2 83 aa6.72□□□□□ -1.33
SMC6-204ENST00000428868 C2orf70A6NJV1 201 aa6.72□□□□□ -1.33
SMC6-204ENST00000428868 K7EMT4 169 aa6.72□□□□□ -1.33
SMC6-204ENST00000428868 M0R3E3 92 aa6.72□□□□□ -1.33
SMC6-204ENST00000428868 CCL24O00175 119 aa6.72□□□□□ -1.33
SMC6-204ENST00000428868 LGALS9O00182 355 aa6.72□□□□□ -1.33
SMC6-204ENST00000428868 RPL7P18124 248 aaKnown RBP6.72□□□□□ -1.33
SMC6-204ENST00000428868 ATF4P18848 351 aaPredicted RBP6.72□□□□□ -1.33
SMC6-204ENST00000428868 SUMO1P63165 101 aaKnown RBP6.72□□□□□ -1.33
SMC6-204ENST00000428868 C10orf91Q5T1B1 145 aa6.72□□□□□ -1.33
SMC6-204ENST00000428868 STXBP6Q8NFX7 210 aa6.72□□□□□ -1.33
SMC6-204ENST00000428868 OR4F17Q8NGA8 305 aa6.72□□□□□ -1.33
SMC6-204ENST00000428868 DPF1Q92782 380 aa6.72□□□□□ -1.33
SMC6-204ENST00000428868 RPUSD4Q96CM3 377 aaKnown RBP6.72□□□□□ -1.33
SMC6-204ENST00000428868 SLC35B3Q9H1N7 401 aa6.72□□□□□ -1.33
SMC6-204ENST00000428868 MLXQ9UH92 298 aa6.72□□□□□ -1.33
SMC6-204ENST00000428868 RPH3ALQ9UNE2 315 aa6.72□□□□□ -1.33
SMC6-204ENST00000428868 UFC1Q9Y3C8 167 aa6.72□□□□□ -1.33
SMC6-204ENST00000428868 ATRQ13535 2644 aa6.72□□□□□ -1.33
SMC6-204ENST00000428868 TRAV8-2A0A0B4J237 113 aa6.71□□□□□ -1.34
SMC6-204ENST00000428868 PGPA6NDG6 321 aa6.71□□□□□ -1.34
SMC6-204ENST00000428868 F8W036 122 aa6.71□□□□□ -1.34
SMC6-204ENST00000428868 CSN3P07498 182 aa6.71□□□□□ -1.34
SMC6-204ENST00000428868 ZNF674Q2M3X9 581 aa6.71□□□□□ -1.34
SMC6-204ENST00000428868 ATRAIDQ6UW56 229 aa6.71□□□□□ -1.34
SMC6-204ENST00000428868 RNF182Q8N6D2 247 aa6.71□□□□□ -1.34
SMC6-204ENST00000428868 C20orf173Q96LM9 149 aa6.71□□□□□ -1.34
SMC6-204ENST00000428868 LINC00479Q96M42 142 aa6.71□□□□□ -1.34
SMC6-204ENST00000428868 ASCL2Q99929 193 aa6.71□□□□□ -1.34
SMC6-204ENST00000428868 PARLQ9H300 379 aa6.71□□□□□ -1.34
SMC6-204ENST00000428868 ARL2-SNX15V9GYD0 113 aa6.71□□□□□ -1.34
SMC6-204ENST00000428868 TRBV20OR9-2A0A075B6H5 130 aa6.7□□□□□ -1.34
SMC6-204ENST00000428868 TRAV34A0A0B4J273 112 aa6.7□□□□□ -1.34
SMC6-204ENST00000428868 PGPEP1LA6NFU8 196 aa6.7□□□□□ -1.34
SMC6-204ENST00000428868 ZNF785A8K8V0 405 aa6.7□□□□□ -1.34
SMC6-204ENST00000428868 ZNF705FA8MVS1 300 aaPredicted RBP6.7□□□□□ -1.34
SMC6-204ENST00000428868 F6UZH7 168 aa6.7□□□□□ -1.34
SMC6-204ENST00000428868 SOCS3O14543 225 aa6.7□□□□□ -1.34
SMC6-204ENST00000428868 APOC3P02656 99 aa6.7□□□□□ -1.34
SMC6-204ENST00000428868 SLC25A5P05141 298 aaKnown RBP6.7□□□□□ -1.34
SMC6-204ENST00000428868 FOLR2P14207 255 aa6.7□□□□□ -1.34
SMC6-204ENST00000428868 CBLN1P23435 193 aa6.7□□□□□ -1.34
SMC6-204ENST00000428868 GALR1P47211 349 aa6.7□□□□□ -1.34
SMC6-204ENST00000428868 DEFB1P60022 68 aa6.7□□□□□ -1.34
SMC6-204ENST00000428868 FOXL1Q12952 345 aa6.7□□□□□ -1.34
SMC6-204ENST00000428868 C1orf194Q5T5A4 169 aa6.7□□□□□ -1.34
SMC6-204ENST00000428868 TCF24Q7RTU0 167 aa6.7□□□□□ -1.34
SMC6-204ENST00000428868 NDUFA11Q86Y39 141 aa6.7□□□□□ -1.34
SMC6-204ENST00000428868 FAM24BQ8N5W8 94 aa6.7□□□□□ -1.34
SMC6-204ENST00000428868 OR9G4Q8NGQ1 327 aa6.7□□□□□ -1.34
SMC6-204ENST00000428868 C2CD4CQ8TF44 421 aa6.7□□□□□ -1.34
SMC6-204ENST00000428868 C11orf52Q96A22 123 aa6.7□□□□□ -1.34
SMC6-204ENST00000428868 SGK494Q96LW2 274 aa6.7□□□□□ -1.34
SMC6-204ENST00000428868 CITED1Q99966 193 aa6.7□□□□□ -1.34
SMC6-204ENST00000428868 SEC11CQ9BY50 192 aa6.7□□□□□ -1.34
SMC6-204ENST00000428868 SMDT1Q9H4I9 107 aa6.7□□□□□ -1.34
SMC6-204ENST00000428868 ZNF331Q9NQX6 463 aaPredicted RBP6.7□□□□□ -1.34
SMC6-204ENST00000428868 OTORQ9NRC9 128 aa6.7□□□□□ -1.34
SMC6-204ENST00000428868 CARHSP1Q9Y2V2 147 aaKnown RBP6.7□□□□□ -1.34
SMC6-204ENST00000428868 STAB1Q9NY15 2570 aa6.7□□□□□ -1.34
SMC6-204ENST00000428868 A0A1B0GUS0 222 aa6.69□□□□□ -1.34
SMC6-204ENST00000428868 KRBOX1C9JBD0 128 aa6.69□□□□□ -1.34
SMC6-204ENST00000428868 PRAC2D3DTV9 90 aa6.69□□□□□ -1.34
SMC6-204ENST00000428868 TMEM250H0YL14 139 aa6.69□□□□□ -1.34
SMC6-204ENST00000428868 PEX7O00628 323 aa6.69□□□□□ -1.34
SMC6-204ENST00000428868 SCO1O75880 301 aa6.69□□□□□ -1.34
SMC6-204ENST00000428868 S100A1P23297 94 aa6.69□□□□□ -1.34
SMC6-204ENST00000428868 TAGLN2P37802 199 aaKnown RBP6.69□□□□□ -1.34
SMC6-204ENST00000428868 SOHLH1Q5JUK2 328 aa6.69□□□□□ -1.34
SMC6-204ENST00000428868 S100A7AQ86SG5 101 aa6.69□□□□□ -1.34
SMC6-204ENST00000428868 GBGT1Q8N5D6 347 aa6.69□□□□□ -1.34
SMC6-204ENST00000428868 GPR82Q96P67 336 aa6.69□□□□□ -1.34
SMC6-204ENST00000428868 AURKAIP1Q9NWT8 199 aaPredicted RBP6.69□□□□□ -1.34
SMC6-204ENST00000428868 TRRAPQ9Y4A5 3859 aa6.69□□□□□ -1.34
SMC6-204ENST00000428868 IGKV2-40A0A087WW87 121 aaPredicted RBP6.68□□□□□ -1.34
SMC6-204ENST00000428868 TRAV8-1A0A0A6YYK1 113 aa6.68□□□□□ -1.34
SMC6-204ENST00000428868 A0A1W2PS18 150 aa6.68□□□□□ -1.34
SMC6-204ENST00000428868 IZUMO1RA6ND01 250 aa6.68□□□□□ -1.34
SMC6-204ENST00000428868 ZNF727A8MUV8 499 aa6.68□□□□□ -1.34
SMC6-204ENST00000428868 OVOL1O14753 267 aa6.68□□□□□ -1.34
SMC6-204ENST00000428868 PDE6DO43924 150 aa6.68□□□□□ -1.34
SMC6-204ENST00000428868 IGKV2D-40P01614 121 aaPredicted RBP6.68□□□□□ -1.34
SMC6-204ENST00000428868 TCRAP04437 139 aa6.68□□□□□ -1.34
SMC6-204ENST00000428868 RPL35P42766 123 aaKnown RBP6.68□□□□□ -1.34
SMC6-204ENST00000428868 TFPI2P48307 235 aa6.68□□□□□ -1.34
SMC6-204ENST00000428868 PDE6HQ13956 83 aa6.68□□□□□ -1.34
SMC6-204ENST00000428868 WFDC3Q8IUB2 231 aa6.68□□□□□ -1.34
SMC6-204ENST00000428868 C5orf17Q8NAS9 161 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms