RNA–Protein interactions for RNA: ENST00000428776.1

HMGB3P4-201, Transcript of high mobility group box 3 pseudogene 4, humanhuman

BASIC

Gene HMGB3P4, Length 514 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P4-201ENST00000428776 CHEK1O14757 476 aa9.68□□□□□ -0.86
HMGB3P4-201ENST00000428776 NDUFB4O95168 129 aa9.68□□□□□ -0.86
HMGB3P4-201ENST00000428776 SNRPCP09234 159 aaKnown RBP9.68□□□□□ -0.86
HMGB3P4-201ENST00000428776 ADCYAP1P18509 176 aa9.68□□□□□ -0.86
HMGB3P4-201ENST00000428776 CEBPGP53567 150 aa9.68□□□□□ -0.86
HMGB3P4-201ENST00000428776 SLURP1P55000 103 aa9.68□□□□□ -0.86
HMGB3P4-201ENST00000428776 PSG9Q00887 426 aa9.68□□□□□ -0.86
HMGB3P4-201ENST00000428776 FHL3Q13643 280 aa9.68□□□□□ -0.86
HMGB3P4-201ENST00000428776 FAM90A2PQ658T7 463 aa9.68□□□□□ -0.86
HMGB3P4-201ENST00000428776 SIGLEC15Q6ZMC9 328 aa9.68□□□□□ -0.86
HMGB3P4-201ENST00000428776 RAX2Q96IS3 184 aa9.68□□□□□ -0.86
HMGB3P4-201ENST00000428776 C17orf77Q96MU5 243 aa9.68□□□□□ -0.86
HMGB3P4-201ENST00000428776 RHPN1-AS1Q9BWJ2 59 aa9.68□□□□□ -0.86
HMGB3P4-201ENST00000428776 Q9H3A6 140 aa9.68□□□□□ -0.86
HMGB3P4-201ENST00000428776 OTORQ9NRC9 128 aa9.68□□□□□ -0.86
HMGB3P4-201ENST00000428776 CARHSP1Q9Y2V2 147 aaKnown RBP9.68□□□□□ -0.86
HMGB3P4-201ENST00000428776 PGPA6NDG6 321 aa9.67□□□□□ -0.86
HMGB3P4-201ENST00000428776 HELTA6NFD8 242 aa9.67□□□□□ -0.86
HMGB3P4-201ENST00000428776 H3BTX0 84 aa9.67□□□□□ -0.86
HMGB3P4-201ENST00000428776 CCL24O00175 119 aa9.67□□□□□ -0.86
HMGB3P4-201ENST00000428776 FAM74A3Q4VXF1 159 aa9.67□□□□□ -0.86
HMGB3P4-201ENST00000428776 NDUFA11Q86Y39 141 aa9.67□□□□□ -0.86
HMGB3P4-201ENST00000428776 C11orf52Q96A22 123 aa9.67□□□□□ -0.86
HMGB3P4-201ENST00000428776 PEMTQ9UBM1 199 aa9.67□□□□□ -0.86
HMGB3P4-201ENST00000428776 JMJD1CQ15652 2540 aa9.67□□□□□ -0.86
HMGB3P4-201ENST00000428776 TENM1Q9UKZ4 2725 aa9.66□□□□□ -0.86
HMGB3P4-201ENST00000428776 C2orf70A6NJV1 201 aa9.66□□□□□ -0.86
HMGB3P4-201ENST00000428776 ADARB2-AS1A8MUL3 147 aa9.66□□□□□ -0.86
HMGB3P4-201ENST00000428776 APOC3P02656 99 aa9.66□□□□□ -0.86
HMGB3P4-201ENST00000428776 CBLN1P23435 193 aa9.66□□□□□ -0.86
HMGB3P4-201ENST00000428776 KRTAP10-3P60369 221 aa9.66□□□□□ -0.86
HMGB3P4-201ENST00000428776 HIST2H2BDQ6DRA6 164 aa9.66□□□□□ -0.86
HMGB3P4-201ENST00000428776 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.66□□□□□ -0.86
HMGB3P4-201ENST00000428776 C5orf17Q8NAS9 161 aa9.66□□□□□ -0.86
HMGB3P4-201ENST00000428776 DLX4Q92988 240 aaPredicted RBP9.66□□□□□ -0.86
HMGB3P4-201ENST00000428776 HIST1H2BAQ96A08 127 aa9.66□□□□□ -0.86
HMGB3P4-201ENST00000428776 RPUSD4Q96CM3 377 aaKnown RBP9.66□□□□□ -0.86
HMGB3P4-201ENST00000428776 DUX3Q96PT4 197 aa9.66□□□□□ -0.86
HMGB3P4-201ENST00000428776 SLC50A1Q9BRV3 221 aa9.66□□□□□ -0.86
HMGB3P4-201ENST00000428776 AAMDCQ9H7C9 122 aa9.66□□□□□ -0.86
HMGB3P4-201ENST00000428776 WNK1Q9H4A3 2382 aa9.65□□□□□ -0.86
HMGB3P4-201ENST00000428776 SCO2A0A1W2PP80 73 aa9.65□□□□□ -0.86
HMGB3P4-201ENST00000428776 ZNF727A8MUV8 499 aa9.65□□□□□ -0.86
HMGB3P4-201ENST00000428776 M0QZ24 198 aa9.65□□□□□ -0.86
HMGB3P4-201ENST00000428776 SLC17A3O00476 420 aa9.65□□□□□ -0.86
HMGB3P4-201ENST00000428776 SLC25A5P05141 298 aaKnown RBP9.65□□□□□ -0.86
HMGB3P4-201ENST00000428776 EXOC3-AS1Q8N2X6 119 aa9.65□□□□□ -0.86
HMGB3P4-201ENST00000428776 ARL6IP6Q8N6S5 226 aa9.65□□□□□ -0.86
HMGB3P4-201ENST00000428776 OR9G4Q8NGQ1 327 aa9.65□□□□□ -0.86
HMGB3P4-201ENST00000428776 SMIM7Q9BQ49 75 aa9.65□□□□□ -0.86
HMGB3P4-201ENST00000428776 PARLQ9H300 379 aa9.65□□□□□ -0.86
HMGB3P4-201ENST00000428776 ZNF331Q9NQX6 463 aaPredicted RBP9.65□□□□□ -0.86
HMGB3P4-201ENST00000428776 EPDR1Q9UM22 224 aa9.65□□□□□ -0.86
HMGB3P4-201ENST00000428776 PEX7O00628 323 aa9.64□□□□□ -0.87
HMGB3P4-201ENST00000428776 FOLR2P14207 255 aa9.64□□□□□ -0.87
HMGB3P4-201ENST00000428776 EDN2P20800 178 aa9.64□□□□□ -0.87
HMGB3P4-201ENST00000428776 NSUN5P1Q3KNT7 163 aa9.64□□□□□ -0.87
HMGB3P4-201ENST00000428776 AWAT1Q58HT5 328 aa9.64□□□□□ -0.87
HMGB3P4-201ENST00000428776 TCF24Q7RTU0 167 aa9.64□□□□□ -0.87
HMGB3P4-201ENST00000428776 SVBPQ8N300 66 aa9.64□□□□□ -0.87
HMGB3P4-201ENST00000428776 CMTM2Q8TAZ6 248 aa9.64□□□□□ -0.87
HMGB3P4-201ENST00000428776 C2CD4CQ8TF44 421 aa9.64□□□□□ -0.87
HMGB3P4-201ENST00000428776 NIPSNAP3BQ9BS92 247 aa9.64□□□□□ -0.87
HMGB3P4-201ENST00000428776 CLEC5AQ9NY25 188 aa9.64□□□□□ -0.87
HMGB3P4-201ENST00000428776 ATRQ13535 2644 aa9.63□□□□□ -0.87
HMGB3P4-201ENST00000428776 TCRAP04437 139 aa9.63□□□□□ -0.87
HMGB3P4-201ENST00000428776 S100A9P06702 114 aaKnown RBP9.63□□□□□ -0.87
HMGB3P4-201ENST00000428776 RPL11P62913 178 aaKnown RBP9.63□□□□□ -0.87
HMGB3P4-201ENST00000428776 GUCA2BQ16661 112 aa9.63□□□□□ -0.87
HMGB3P4-201ENST00000428776 TMEM241Q24JQ0 296 aa9.63□□□□□ -0.87
HMGB3P4-201ENST00000428776 ZNF674Q2M3X9 581 aa9.63□□□□□ -0.87
HMGB3P4-201ENST00000428776 ATG101Q9BSB4 218 aa9.63□□□□□ -0.87
HMGB3P4-201ENST00000428776 DERL1Q9BUN8 251 aa9.63□□□□□ -0.87
HMGB3P4-201ENST00000428776 NRN1Q9NPD7 142 aa9.63□□□□□ -0.87
HMGB3P4-201ENST00000428776 PRELID1Q9Y255 219 aa9.63□□□□□ -0.87
HMGB3P4-201ENST00000428776 OVOL1O14753 267 aa9.62□□□□□ -0.87
HMGB3P4-201ENST00000428776 SNAPINO95295 136 aa9.62□□□□□ -0.87
HMGB3P4-201ENST00000428776 CSN3P07498 182 aa9.62□□□□□ -0.87
HMGB3P4-201ENST00000428776 AKR1C3P42330 323 aa9.62□□□□□ -0.87
HMGB3P4-201ENST00000428776 RPL35P42766 123 aaKnown RBP9.62□□□□□ -0.87
HMGB3P4-201ENST00000428776 CSN1S1P47710 185 aa9.62□□□□□ -0.87
HMGB3P4-201ENST00000428776 CNN1P51911 297 aaKnown RBP9.62□□□□□ -0.87
HMGB3P4-201ENST00000428776 GNG5P63218 68 aa9.62□□□□□ -0.87
HMGB3P4-201ENST00000428776 SAMD13Q5VXD3 122 aa9.62□□□□□ -0.87
HMGB3P4-201ENST00000428776 ADAMTSL5Q6ZMM2 481 aa9.62□□□□□ -0.87
HMGB3P4-201ENST00000428776 TVP23CQ96ET8 276 aa9.62□□□□□ -0.87
HMGB3P4-201ENST00000428776 CITED1Q99966 193 aa9.62□□□□□ -0.87
HMGB3P4-201ENST00000428776 NAT8Q9UHE5 227 aa9.62□□□□□ -0.87
HMGB3P4-201ENST00000428776 KLF12Q9Y4X4 402 aa9.62□□□□□ -0.87
HMGB3P4-201ENST00000428776 SERTM2A0A1B0GWG4 89 aa9.61□□□□□ -0.87
HMGB3P4-201ENST00000428776 C9JCJ5 164 aa9.61□□□□□ -0.87
HMGB3P4-201ENST00000428776 K7EQM0 130 aa9.61□□□□□ -0.87
HMGB3P4-201ENST00000428776 TAS2R60P59551 318 aa9.61□□□□□ -0.87
HMGB3P4-201ENST00000428776 PNRC1Q12796 327 aaPredicted RBP9.61□□□□□ -0.87
HMGB3P4-201ENST00000428776 KRTAP24-1Q3LI83 254 aa9.61□□□□□ -0.87
HMGB3P4-201ENST00000428776 MRPL53Q96EL3 112 aaKnown RBP9.61□□□□□ -0.87
HMGB3P4-201ENST00000428776 C16orf92Q96LL3 132 aa9.61□□□□□ -0.87
HMGB3P4-201ENST00000428776 SDF2L1Q9HCN8 221 aa9.61□□□□□ -0.87
HMGB3P4-201ENST00000428776 SIGLEC8Q9NYZ4 499 aa9.61□□□□□ -0.87
HMGB3P4-201ENST00000428776 MLXQ9UH92 298 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms