RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 SRSF8Q9BRL6 282 aaKnown RBP7.28□□□□□ -1.24
CTNND1-208ENST00000428599 TRAV8-3A0A0A6YYJ7 113 aa7.28□□□□□ -1.24
CTNND1-208ENST00000428599 KLF17Q5JT82 389 aaPredicted RBP7.28□□□□□ -1.24
CTNND1-208ENST00000428599 LIME1Q9H400 295 aa7.28□□□□□ -1.24
CTNND1-208ENST00000428599 ZNF319Q9P2F9 582 aa7.28□□□□□ -1.24
CTNND1-208ENST00000428599 J3QLI3 93 aa7.28□□□□□ -1.24
CTNND1-208ENST00000428599 SELLP14151 372 aa7.28□□□□□ -1.24
CTNND1-208ENST00000428599 PRTN3P24158 256 aa7.28□□□□□ -1.24
CTNND1-208ENST00000428599 KLF5Q13887 457 aaPredicted RBP7.28□□□□□ -1.24
CTNND1-208ENST00000428599 PLA2G2CQ5R387 149 aa7.28□□□□□ -1.24
CTNND1-208ENST00000428599 GAGE2AQ6NT46 116 aa7.28□□□□□ -1.24
CTNND1-208ENST00000428599 SPXQ9BT56 116 aa7.28□□□□□ -1.24
CTNND1-208ENST00000428599 SIGLEC9Q9Y336 463 aa7.28□□□□□ -1.24
CTNND1-208ENST00000428599 PTPRDP23468 1912 aa7.28□□□□□ -1.24
CTNND1-208ENST00000428599 LY6G6EA0A0G2JKS1 128 aa7.28□□□□□ -1.24
CTNND1-208ENST00000428599 K7ENP7 123 aa7.28□□□□□ -1.24
CTNND1-208ENST00000428599 ARTNQ5T4W7 220 aa7.28□□□□□ -1.24
CTNND1-208ENST00000428599 C1QL4Q86Z23 238 aa7.28□□□□□ -1.24
CTNND1-208ENST00000428599 U3KQA8 63 aa7.28□□□□□ -1.24
CTNND1-208ENST00000428599 AZU1P20160 251 aa7.27□□□□□ -1.25
CTNND1-208ENST00000428599 CRYGSP22914 178 aa7.27□□□□□ -1.25
CTNND1-208ENST00000428599 ID3Q02535 119 aa7.27□□□□□ -1.25
CTNND1-208ENST00000428599 CITED1Q99966 193 aa7.27□□□□□ -1.25
CTNND1-208ENST00000428599 IGKV1-9A0A0C4DH69 117 aa7.27□□□□□ -1.25
CTNND1-208ENST00000428599 A6NNC1 897 aa7.27□□□□□ -1.25
CTNND1-208ENST00000428599 MMP23AO75900 390 aa7.27□□□□□ -1.25
CTNND1-208ENST00000428599 UBE2E1P51965 193 aa7.27□□□□□ -1.25
CTNND1-208ENST00000428599 RUSC1-AS1Q66K80 236 aa7.27□□□□□ -1.25
CTNND1-208ENST00000428599 ZFAND6Q6FIF0 208 aa7.27□□□□□ -1.25
CTNND1-208ENST00000428599 LINC00518Q8N0U6 118 aa7.27□□□□□ -1.25
CTNND1-208ENST00000428599 Q8TAT8 98 aa7.27□□□□□ -1.25
CTNND1-208ENST00000428599 INAFM2P0DMQ5 153 aa7.27□□□□□ -1.25
CTNND1-208ENST00000428599 CR1LQ2VPA4 569 aa7.27□□□□□ -1.25
CTNND1-208ENST00000428599 CHAC1Q9BUX1 264 aa7.27□□□□□ -1.25
CTNND1-208ENST00000428599 ESPL1Q14674 2120 aa7.27□□□□□ -1.25
CTNND1-208ENST00000428599 Q71RC1 249 aaPredicted RBP7.26□□□□□ -1.25
CTNND1-208ENST00000428599 PAQR4Q8N4S7 273 aaPredicted RBP7.26□□□□□ -1.25
CTNND1-208ENST00000428599 PRSS33Q8NF86 280 aa7.26□□□□□ -1.25
CTNND1-208ENST00000428599 CD5LO43866 347 aa7.26□□□□□ -1.25
CTNND1-208ENST00000428599 UBE2BP63146 152 aa7.26□□□□□ -1.25
CTNND1-208ENST00000428599 RPRMLQ8N4K4 120 aa7.26□□□□□ -1.25
CTNND1-208ENST00000428599 IGHV1-69DA0A0B4J2H0 117 aa7.26□□□□□ -1.25
CTNND1-208ENST00000428599 IGHV1-69P01742 117 aa7.26□□□□□ -1.25
CTNND1-208ENST00000428599 OCIAD2Q56VL3 154 aa7.26□□□□□ -1.25
CTNND1-208ENST00000428599 COX11Q9Y6N1 276 aa7.26□□□□□ -1.25
CTNND1-208ENST00000428599 RNF222A6NCQ9 220 aa7.26□□□□□ -1.25
CTNND1-208ENST00000428599 SOCS3O14543 225 aa7.26□□□□□ -1.25
CTNND1-208ENST00000428599 IGHG3P01860 377 aa7.26□□□□□ -1.25
CTNND1-208ENST00000428599 FREM3P0C091 2139 aa7.26□□□□□ -1.25
CTNND1-208ENST00000428599 TAL2Q16559 108 aa7.26□□□□□ -1.25
CTNND1-208ENST00000428599 ANXA2RQ3ZCQ2 193 aa7.26□□□□□ -1.25
CTNND1-208ENST00000428599 NEGR1Q7Z3B1 354 aa7.26□□□□□ -1.25
CTNND1-208ENST00000428599 SNRNP200O75643 2136 aaKnown RBP7.26□□□□□ -1.25
CTNND1-208ENST00000428599 ANAPC1Q9H1A4 1944 aa7.25□□□□□ -1.25
CTNND1-208ENST00000428599 B3GALT5-AS1P59052 145 aa7.25□□□□□ -1.25
CTNND1-208ENST00000428599 PRR30Q53SZ7 412 aaPredicted RBP7.25□□□□□ -1.25
CTNND1-208ENST00000428599 CT83Q5H943 113 aa7.25□□□□□ -1.25
CTNND1-208ENST00000428599 SPATA31B1PQ5VZV4 182 aa7.25□□□□□ -1.25
CTNND1-208ENST00000428599 IL17RELQ6ZVW7 336 aa7.25□□□□□ -1.25
CTNND1-208ENST00000428599 PAX9P55771 341 aa7.25□□□□□ -1.25
CTNND1-208ENST00000428599 IGFL4Q6B9Z1 124 aa7.25□□□□□ -1.25
CTNND1-208ENST00000428599 BCL6BQ8N143 479 aaPredicted RBP7.25□□□□□ -1.25
CTNND1-208ENST00000428599 TRAV25A0A0B4J276 109 aa7.25□□□□□ -1.25
CTNND1-208ENST00000428599 GAGE12BA1L429 117 aa7.25□□□□□ -1.25
CTNND1-208ENST00000428599 GAGE7O76087 117 aa7.25□□□□□ -1.25
CTNND1-208ENST00000428599 DKK1O94907 266 aa7.25□□□□□ -1.25
CTNND1-208ENST00000428599 GAGE12FP0CL80 117 aa7.25□□□□□ -1.25
CTNND1-208ENST00000428599 GAGE12GP0CL81 117 aa7.25□□□□□ -1.25
CTNND1-208ENST00000428599 GAGE12IP0CL82 117 aa7.25□□□□□ -1.25
CTNND1-208ENST00000428599 MYO7BQ6PIF6 2116 aa7.25□□□□□ -1.25
CTNND1-208ENST00000428599 GLRX5Q86SX6 157 aa7.25□□□□□ -1.25
CTNND1-208ENST00000428599 TMEM158Q8WZ71 300 aa7.25□□□□□ -1.25
CTNND1-208ENST00000428599 TRAV8-1A0A0A6YYK1 113 aa7.25□□□□□ -1.25
CTNND1-208ENST00000428599 NBL1P41271 181 aa7.25□□□□□ -1.25
CTNND1-208ENST00000428599 MAPK1IP1LQ8NDC0 245 aa7.25□□□□□ -1.25
CTNND1-208ENST00000428599 TMEM243Q9BU79 118 aa7.25□□□□□ -1.25
CTNND1-208ENST00000428599 SMIM2Q9BVW6 85 aa7.25□□□□□ -1.25
CTNND1-208ENST00000428599 DKK4Q9UBT3 224 aa7.25□□□□□ -1.25
CTNND1-208ENST00000428599 TEX48A0A1B0GUV7 120 aa7.25□□□□□ -1.25
CTNND1-208ENST00000428599 FANCMQ8IYD8 2048 aa7.24□□□□□ -1.25
CTNND1-208ENST00000428599 MRAPQ8TCY5 172 aa7.24□□□□□ -1.25
CTNND1-208ENST00000428599 NOTCH4Q99466 2003 aa7.24□□□□□ -1.25
CTNND1-208ENST00000428599 J3QRE1 110 aa7.24□□□□□ -1.25
CTNND1-208ENST00000428599 KNCNA6PVL3 124 aa7.24□□□□□ -1.25
CTNND1-208ENST00000428599 I3L3M4 83 aa7.24□□□□□ -1.25
CTNND1-208ENST00000428599 NDUFS5O43920 106 aa7.24□□□□□ -1.25
CTNND1-208ENST00000428599 LYPD2Q6UXB3 125 aa7.24□□□□□ -1.25
CTNND1-208ENST00000428599 RNF126Q9BV68 326 aa7.24□□□□□ -1.25
CTNND1-208ENST00000428599 E7EQL1 145 aa7.24□□□□□ -1.25
CTNND1-208ENST00000428599 PFN2P35080 140 aa7.24□□□□□ -1.25
CTNND1-208ENST00000428599 TMEM141Q96I45 108 aa7.24□□□□□ -1.25
CTNND1-208ENST00000428599 VSIRQ9H7M9 311 aa7.24□□□□□ -1.25
CTNND1-208ENST00000428599 SLAQ13239 276 aa7.24□□□□□ -1.25
CTNND1-208ENST00000428599 PDE6HQ13956 83 aa7.24□□□□□ -1.25
CTNND1-208ENST00000428599 TMEM256Q8N2U0 113 aa7.24□□□□□ -1.25
CTNND1-208ENST00000428599 SCN8AQ9UQD0 1980 aa7.23□□□□□ -1.25
CTNND1-208ENST00000428599 IGHV3-16A0A0C4DH30 117 aa7.23□□□□□ -1.25
CTNND1-208ENST00000428599 ATP6V0E1O15342 81 aa7.23□□□□□ -1.25
CTNND1-208ENST00000428599 NDUFB8O95169 186 aa7.23□□□□□ -1.25
CTNND1-208ENST00000428599 MPZP25189 248 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms