RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 RHOBP62745 196 aa12.22□□□□□ -0.45
DDR1-235ENST00000428153 HIST1H1AQ02539 215 aaPredicted RBP12.22□□□□□ -0.45
DDR1-235ENST00000428153 SPANXN2Q5MJ10 180 aa12.22□□□□□ -0.45
DDR1-235ENST00000428153 OR10P1Q8NGE3 313 aa12.22□□□□□ -0.45
DDR1-235ENST00000428153 ZNRF2Q8NHG8 242 aa12.22□□□□□ -0.45
DDR1-235ENST00000428153 LRRC20Q8TCA0 184 aa12.22□□□□□ -0.45
DDR1-235ENST00000428153 UHRF2Q96PU4 802 aa12.22□□□□□ -0.45
DDR1-235ENST00000428153 LINC01587Q99440 93 aa12.22□□□□□ -0.45
DDR1-235ENST00000428153 GGACTQ9BVM4 153 aa12.22□□□□□ -0.45
DDR1-235ENST00000428153 PPP1R14DQ9NXH3 145 aa12.22□□□□□ -0.45
DDR1-235ENST00000428153 TRAV12-2A0A075B6T6 113 aa12.21□□□□□ -0.45
DDR1-235ENST00000428153 NBDYA0A0U1RRE5 68 aa12.21□□□□□ -0.45
DDR1-235ENST00000428153 F5H768 121 aa12.21□□□□□ -0.45
DDR1-235ENST00000428153 MRPS12O15235 138 aaKnown RBP12.21□□□□□ -0.45
DDR1-235ENST00000428153 SSSCA1O60232 199 aa12.21□□□□□ -0.45
DDR1-235ENST00000428153 AZU1P20160 251 aa12.21□□□□□ -0.45
DDR1-235ENST00000428153 CCL18P55774 89 aa12.21□□□□□ -0.45
DDR1-235ENST00000428153 LCN15Q6UWW0 184 aa12.21□□□□□ -0.45
DDR1-235ENST00000428153 SLC50A1Q9BRV3 221 aa12.21□□□□□ -0.45
DDR1-235ENST00000428153 SRRQ9GZT4 340 aa12.21□□□□□ -0.45
DDR1-235ENST00000428153 ARL6Q9H0F7 186 aa12.21□□□□□ -0.45
DDR1-235ENST00000428153 ARV1Q9H2C2 271 aa12.21□□□□□ -0.45
DDR1-235ENST00000428153 MGAT4CQ9UBM8 478 aa12.21□□□□□ -0.45
DDR1-235ENST00000428153 H7BYZ3 331 aa12.2□□□□□ -0.46
DDR1-235ENST00000428153 PRM2P04554 102 aa12.2□□□□□ -0.46
DDR1-235ENST00000428153 OR4E1P0C645 316 aa12.2□□□□□ -0.46
DDR1-235ENST00000428153 PATE2Q6UY27 113 aa12.2□□□□□ -0.46
DDR1-235ENST00000428153 ZNF546Q86UE3 836 aa12.2□□□□□ -0.46
DDR1-235ENST00000428153 RNASE8Q8TDE3 154 aaKnown RBP12.2□□□□□ -0.46
DDR1-235ENST00000428153 TMEM263Q8WUH6 116 aaKnown RBP12.2□□□□□ -0.46
DDR1-235ENST00000428153 RPUSD4Q96CM3 377 aaKnown RBP12.2□□□□□ -0.46
DDR1-235ENST00000428153 ZNF331Q9NQX6 463 aaPredicted RBP12.2□□□□□ -0.46
DDR1-235ENST00000428153 METTL15P1P0C7V9 234 aa12.19□□□□□ -0.46
DDR1-235ENST00000428153 ANXA7P20073 488 aaKnown RBP12.19□□□□□ -0.46
DDR1-235ENST00000428153 INPP1P49441 399 aa12.19□□□□□ -0.46
DDR1-235ENST00000428153 RRAS2P62070 204 aaPredicted RBP12.19□□□□□ -0.46
DDR1-235ENST00000428153 CNPY1Q3B7I2 92 aa12.19□□□□□ -0.46
DDR1-235ENST00000428153 ZNF575Q86XF7 245 aa12.19□□□□□ -0.46
DDR1-235ENST00000428153 C6orf223Q8N319 242 aa12.19□□□□□ -0.46
DDR1-235ENST00000428153 OR10J6PQ8NGY7 276 aa12.19□□□□□ -0.46
DDR1-235ENST00000428153 ZNF503Q96F45 646 aa12.19□□□□□ -0.46
DDR1-235ENST00000428153 ABCA13Q86UQ4 5058 aa12.19□□□□□ -0.46
DDR1-235ENST00000428153 HSPG2P98160 4391 aa12.18□□□□□ -0.46
DDR1-235ENST00000428153 ZNF701M0R085 212 aaPredicted RBP12.18□□□□□ -0.46
DDR1-235ENST00000428153 BPIFA4PQ86YQ2 179 aa12.18□□□□□ -0.46
DDR1-235ENST00000428153 LRP1BQ9NZR2 4599 aa12.18□□□□□ -0.46
DDR1-235ENST00000428153 GOSR2O14653 212 aa12.17□□□□□ -0.46
DDR1-235ENST00000428153 CCNKO75909 580 aa12.17□□□□□ -0.46
DDR1-235ENST00000428153 NUDT3O95989 172 aa12.17□□□□□ -0.46
DDR1-235ENST00000428153 SLC38A11Q08AI6 406 aa12.17□□□□□ -0.46
DDR1-235ENST00000428153 FCN2Q15485 313 aa12.17□□□□□ -0.46
DDR1-235ENST00000428153 IAH1Q2TAA2 248 aaPredicted RBP12.17□□□□□ -0.46
DDR1-235ENST00000428153 TRIQKQ629K1 86 aa12.17□□□□□ -0.46
DDR1-235ENST00000428153 LINC00305Q7Z4B0 112 aa12.17□□□□□ -0.46
DDR1-235ENST00000428153 LINC00612Q8N6U2 182 aa12.17□□□□□ -0.46
DDR1-235ENST00000428153 CCDC160A6NGH7 325 aa12.16□□□□□ -0.46
DDR1-235ENST00000428153 CENPXA8MT69 81 aa12.16□□□□□ -0.46
DDR1-235ENST00000428153 AGPAT2O15120 278 aa12.16□□□□□ -0.46
DDR1-235ENST00000428153 CDK2AP2O75956 126 aa12.16□□□□□ -0.46
DDR1-235ENST00000428153 BAK1Q16611 211 aa12.16□□□□□ -0.46
DDR1-235ENST00000428153 ZBTB8BQ8NAP8 495 aaPredicted RBP12.16□□□□□ -0.46
DDR1-235ENST00000428153 MITD1Q8WV92 249 aa12.16□□□□□ -0.46
DDR1-235ENST00000428153 RNF141Q8WVD5 230 aa12.16□□□□□ -0.46
DDR1-235ENST00000428153 FLVCR2Q9UPI3 526 aa12.16□□□□□ -0.46
DDR1-235ENST00000428153 RCL1Q9Y2P8 373 aaKnown RBP12.16□□□□□ -0.46
DDR1-235ENST00000428153 LINC00588Q9Y4M8 146 aa12.16□□□□□ -0.46
DDR1-235ENST00000428153 PXMP4Q9Y6I8 212 aa12.16□□□□□ -0.46
DDR1-235ENST00000428153 H3BNG1 76 aa12.15□□□□□ -0.46
DDR1-235ENST00000428153 TNP2Q05952 138 aa12.15□□□□□ -0.46
DDR1-235ENST00000428153 CLINT1Q14677 625 aa12.15□□□□□ -0.46
DDR1-235ENST00000428153 CCDC28AQ8IWP9 274 aa12.15□□□□□ -0.46
DDR1-235ENST00000428153 ODF3Q96PU9 254 aa12.15□□□□□ -0.46
DDR1-235ENST00000428153 RBM38Q9H0Z9 239 aaKnown RBP12.15□□□□□ -0.46
DDR1-235ENST00000428153 NOP10Q9NPE3 64 aaKnown RBP12.15□□□□□ -0.46
DDR1-235ENST00000428153 C7orf66A4D0T2 115 aa12.14□□□□□ -0.47
DDR1-235ENST00000428153 COX7A2P2O60397 106 aa12.14□□□□□ -0.47
DDR1-235ENST00000428153 SCGB1D2O95969 90 aa12.14□□□□□ -0.47
DDR1-235ENST00000428153 HTN1P15515 57 aa12.14□□□□□ -0.47
DDR1-235ENST00000428153 BTF3P20290 206 aaKnown RBP12.14□□□□□ -0.47
DDR1-235ENST00000428153 TTC32Q5I0X7 151 aa12.14□□□□□ -0.47
DDR1-235ENST00000428153 TMEM37Q8WXS4 190 aa12.14□□□□□ -0.47
DDR1-235ENST00000428153 C16orf90A8MZG2 172 aa12.13□□□□□ -0.47
DDR1-235ENST00000428153 IGLC2P0DOY2 106 aa12.13□□□□□ -0.47
DDR1-235ENST00000428153 M6PRP20645 277 aa12.13□□□□□ -0.47
DDR1-235ENST00000428153 BTCP35070 178 aa12.13□□□□□ -0.47
DDR1-235ENST00000428153 ARL16Q0P5N6 197 aa12.13□□□□□ -0.47
DDR1-235ENST00000428153 RAB31Q13636 194 aa12.13□□□□□ -0.47
DDR1-235ENST00000428153 GUK1Q16774 197 aa12.13□□□□□ -0.47
DDR1-235ENST00000428153 SSX7Q7RTT5 188 aa12.13□□□□□ -0.47
DDR1-235ENST00000428153 RXFP4Q8TDU9 374 aa12.13□□□□□ -0.47
DDR1-235ENST00000428153 SAT2Q96F10 170 aaPredicted RBP12.13□□□□□ -0.47
DDR1-235ENST00000428153 MGST2Q99735 147 aa12.13□□□□□ -0.47
DDR1-235ENST00000428153 UPK3BQ9BT76 320 aa12.13□□□□□ -0.47
DDR1-235ENST00000428153 MBPP02686 304 aaPredicted RBP12.12□□□□□ -0.47
DDR1-235ENST00000428153 GFI1BQ5VTD9 330 aa12.12□□□□□ -0.47
DDR1-235ENST00000428153 C10orf113Q5VZT2 155 aa12.12□□□□□ -0.47
DDR1-235ENST00000428153 Q6ZRG5 221 aa12.12□□□□□ -0.47
DDR1-235ENST00000428153 GNPNAT1Q96EK6 184 aaPredicted RBP12.12□□□□□ -0.47
DDR1-235ENST00000428153 Q9H8V8 135 aa12.12□□□□□ -0.47
DDR1-235ENST00000428153 GSKIPQ9P0R6 139 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms