RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 NUP37Q8NFH4 326 aa3.89□□□□□ -1.79
LINC00458-202ENST00000427299 OR4C13Q8NGP0 309 aa3.89□□□□□ -1.79
LINC00458-202ENST00000427299 CT45A3Q8NHU0 189 aa3.89□□□□□ -1.79
LINC00458-202ENST00000427299 VN1R17PQ8TDU5 208 aa3.89□□□□□ -1.79
LINC00458-202ENST00000427299 ITLN1Q8WWA0 313 aa3.89□□□□□ -1.79
LINC00458-202ENST00000427299 STARD4Q96DR4 205 aa3.89□□□□□ -1.79
LINC00458-202ENST00000427299 FMC1Q96HJ9 113 aa3.89□□□□□ -1.79
LINC00458-202ENST00000427299 FAM218AQ96MZ4 157 aa3.89□□□□□ -1.79
LINC00458-202ENST00000427299 HINT2Q9BX68 163 aa3.89□□□□□ -1.79
LINC00458-202ENST00000427299 RPUSD1Q9UJJ7 312 aaKnown RBP3.89□□□□□ -1.79
LINC00458-202ENST00000427299 AMMECR1Q9Y4X0 333 aaPredicted RBP3.89□□□□□ -1.79
LINC00458-202ENST00000427299 ZDBF2Q9HCK1 2354 aa3.89□□□□□ -1.79
LINC00458-202ENST00000427299 TNCP24821 2201 aa3.89□□□□□ -1.79
LINC00458-202ENST00000427299 KNTC1P50748 2209 aa3.89□□□□□ -1.79
LINC00458-202ENST00000427299 IGHV3-64DA0A0J9YX35 117 aa3.88□□□□□ -1.79
LINC00458-202ENST00000427299 TCRBV4S1A1TA0A5B7 111 aa3.88□□□□□ -1.79
LINC00458-202ENST00000427299 FAM231BA6NCW3 169 aa3.88□□□□□ -1.79
LINC00458-202ENST00000427299 HSBP1L1C9JCN9 74 aa3.88□□□□□ -1.79
LINC00458-202ENST00000427299 PPIAL4DF5H284 164 aa3.88□□□□□ -1.79
LINC00458-202ENST00000427299 OR2J3O76001 311 aa3.88□□□□□ -1.79
LINC00458-202ENST00000427299 LHBP01229 141 aa3.88□□□□□ -1.79
LINC00458-202ENST00000427299 RNASE2P10153 161 aaKnown RBP3.88□□□□□ -1.79
LINC00458-202ENST00000427299 RPL35AP18077 110 aaKnown RBP3.88□□□□□ -1.79
LINC00458-202ENST00000427299 CRYBB3P26998 211 aa3.88□□□□□ -1.79
LINC00458-202ENST00000427299 SRIP30626 198 aa3.88□□□□□ -1.79
LINC00458-202ENST00000427299 GNG10P50151 68 aa3.88□□□□□ -1.79
LINC00458-202ENST00000427299 KRTAP10-8P60410 259 aa3.88□□□□□ -1.79
LINC00458-202ENST00000427299 HBBP68871 147 aa3.88□□□□□ -1.79
LINC00458-202ENST00000427299 PAX2Q02962 417 aa3.88□□□□□ -1.79
LINC00458-202ENST00000427299 KLF5Q13887 457 aaPredicted RBP3.88□□□□□ -1.79
LINC00458-202ENST00000427299 C17orf58Q2M2W7 97 aa3.88□□□□□ -1.79
LINC00458-202ENST00000427299 SPATA31B1PQ5VZV4 182 aa3.88□□□□□ -1.79
LINC00458-202ENST00000427299 Q6AWC8 147 aa3.88□□□□□ -1.79
LINC00458-202ENST00000427299 ABHD12Q8N2K0 398 aa3.88□□□□□ -1.79
LINC00458-202ENST00000427299 ZADH2Q8N4Q0 377 aa3.88□□□□□ -1.79
LINC00458-202ENST00000427299 C5orf17Q8NAS9 161 aa3.88□□□□□ -1.79
LINC00458-202ENST00000427299 C8orf46Q8TAG6 207 aa3.88□□□□□ -1.79
LINC00458-202ENST00000427299 TMEM167AQ8TBQ9 72 aa3.88□□□□□ -1.79
LINC00458-202ENST00000427299 TNFRSF14Q92956 283 aa3.88□□□□□ -1.79
LINC00458-202ENST00000427299 LINC00479Q96M42 142 aa3.88□□□□□ -1.79
LINC00458-202ENST00000427299 WFIKKN1Q96NZ8 548 aa3.88□□□□□ -1.79
LINC00458-202ENST00000427299 GAFA1Q96PS6 74 aa3.88□□□□□ -1.79
LINC00458-202ENST00000427299 PAXXQ9BUH6 204 aa3.88□□□□□ -1.79
LINC00458-202ENST00000427299 FNDC4Q9H6D8 234 aaPredicted RBP3.88□□□□□ -1.79
LINC00458-202ENST00000427299 GNB4Q9HAV0 340 aa3.88□□□□□ -1.79
LINC00458-202ENST00000427299 LPAR2Q9HBW0 351 aa3.88□□□□□ -1.79
LINC00458-202ENST00000427299 ZNF492Q9P255 531 aa3.88□□□□□ -1.79
LINC00458-202ENST00000427299 FZR1Q9UM11 496 aa3.88□□□□□ -1.79
LINC00458-202ENST00000427299 RNF24Q9Y225 148 aa3.88□□□□□ -1.79
LINC00458-202ENST00000427299 WASHC3Q9Y3C0 194 aa3.88□□□□□ -1.79
LINC00458-202ENST00000427299 GOLT1BQ9Y3E0 138 aa3.88□□□□□ -1.79
LINC00458-202ENST00000427299 NAV3Q8IVL0 2385 aa3.88□□□□□ -1.79
LINC00458-202ENST00000427299 PLCE1Q9P212 2302 aa3.87□□□□□ -1.79
LINC00458-202ENST00000427299 IGHV3OR15-7A0A075B7D8 119 aa3.87□□□□□ -1.79
LINC00458-202ENST00000427299 TRAV3A0A0B4J244 114 aa3.87□□□□□ -1.79
LINC00458-202ENST00000427299 A0A0J9YWU9 116 aa3.87□□□□□ -1.79
LINC00458-202ENST00000427299 A0A1B0GW15 77 aa3.87□□□□□ -1.79
LINC00458-202ENST00000427299 A0A1W2PNU3 283 aaPredicted RBP3.87□□□□□ -1.79
LINC00458-202ENST00000427299 A8MWL6 223 aa3.87□□□□□ -1.79
LINC00458-202ENST00000427299 H0YJW9 148 aa3.87□□□□□ -1.79
LINC00458-202ENST00000427299 M0R2Z0 102 aa3.87□□□□□ -1.79
LINC00458-202ENST00000427299 SLC17A3O00476 420 aa3.87□□□□□ -1.79
LINC00458-202ENST00000427299 GPX1P07203 203 aa3.87□□□□□ -1.79
LINC00458-202ENST00000427299 CGB3P0DN86 165 aa3.87□□□□□ -1.79
LINC00458-202ENST00000427299 CGB7P0DN87 165 aa3.87□□□□□ -1.79
LINC00458-202ENST00000427299 ZNF25P17030 456 aaPredicted RBP3.87□□□□□ -1.79
LINC00458-202ENST00000427299 S100A7P31151 101 aa3.87□□□□□ -1.79
LINC00458-202ENST00000427299 ZNF83P51522 516 aa3.87□□□□□ -1.79
LINC00458-202ENST00000427299 ZNF137PP52743 207 aa3.87□□□□□ -1.79
LINC00458-202ENST00000427299 LINC01620Q4KN68 170 aa3.87□□□□□ -1.79
LINC00458-202ENST00000427299 LRRC10Q5BKY1 277 aa3.87□□□□□ -1.79
LINC00458-202ENST00000427299 MRPL54Q6P161 138 aaKnown RBP3.87□□□□□ -1.79
LINC00458-202ENST00000427299 Q6ZN92 141 aa3.87□□□□□ -1.79
LINC00458-202ENST00000427299 DOLPP1Q86YN1 238 aa3.87□□□□□ -1.79
LINC00458-202ENST00000427299 VKORC1L1Q8N0U8 176 aa3.87□□□□□ -1.79
LINC00458-202ENST00000427299 LINC00311Q8N616 119 aa3.87□□□□□ -1.79
LINC00458-202ENST00000427299 ZNRF1Q8ND25 227 aa3.87□□□□□ -1.79
LINC00458-202ENST00000427299 ST6GALNAC3Q8NDV1 305 aa3.87□□□□□ -1.79
LINC00458-202ENST00000427299 FDCSPQ8NFU4 85 aa3.87□□□□□ -1.79
LINC00458-202ENST00000427299 OR2D3Q8NGH3 330 aa3.87□□□□□ -1.79
LINC00458-202ENST00000427299 TSKUQ8WUA8 353 aa3.87□□□□□ -1.79
LINC00458-202ENST00000427299 CHCHD1Q96BP2 118 aaKnown RBP3.87□□□□□ -1.79
LINC00458-202ENST00000427299 FLYWCH2Q96CP2 140 aaKnown RBP3.87□□□□□ -1.79
LINC00458-202ENST00000427299 C2orf48Q96LS8 159 aa3.87□□□□□ -1.79
LINC00458-202ENST00000427299 SLC25A2Q9BXI2 301 aa3.87□□□□□ -1.79
LINC00458-202ENST00000427299 RPP21Q9H633 154 aaKnown RBP3.87□□□□□ -1.79
LINC00458-202ENST00000427299 NRN1Q9NPD7 142 aa3.87□□□□□ -1.79
LINC00458-202ENST00000427299 NDUFA4L2Q9NRX3 87 aa3.87□□□□□ -1.79
LINC00458-202ENST00000427299 ZNF355PQ9NSJ1 428 aa3.87□□□□□ -1.79
LINC00458-202ENST00000427299 TP53TG3Q9ULZ0 132 aa3.87□□□□□ -1.79
LINC00458-202ENST00000427299 ZFP30Q9Y2G7 519 aa3.87□□□□□ -1.79
LINC00458-202ENST00000427299 CBY1Q9Y3M2 126 aa3.87□□□□□ -1.79
LINC00458-202ENST00000427299 FREM2Q5SZK8 3169 aa3.87□□□□□ -1.79
LINC00458-202ENST00000427299 CFAP54Q96N23 3096 aa3.86□□□□□ -1.79
LINC00458-202ENST00000427299 SVILO95425 2214 aa3.86□□□□□ -1.79
LINC00458-202ENST00000427299 TEX50A0A1B0GTY4 177 aa3.86□□□□□ -1.79
LINC00458-202ENST00000427299 A0A1B0GUS0 222 aa3.86□□□□□ -1.79
LINC00458-202ENST00000427299 SERTM2A0A1B0GWG4 89 aa3.86□□□□□ -1.79
LINC00458-202ENST00000427299 PSMB11A5LHX3 300 aa3.86□□□□□ -1.79
LINC00458-202ENST00000427299 DPRXA6NFQ7 191 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms