RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 WDR61Q9GZS3 305 aaKnown RBP12.5□□□□□ -0.41
LMCD1-204ENST00000426878 MED28Q9H204 178 aa12.5□□□□□ -0.41
LMCD1-204ENST00000426878 HRH4Q9H3N8 390 aa12.5□□□□□ -0.41
LMCD1-204ENST00000426878 CLEC5AQ9NY25 188 aa12.5□□□□□ -0.41
LMCD1-204ENST00000426878 IGKV3-20P01619 116 aa12.49□□□□□ -0.41
LMCD1-204ENST00000426878 PSG9Q00887 426 aa12.49□□□□□ -0.41
LMCD1-204ENST00000426878 FCN2Q15485 313 aa12.49□□□□□ -0.41
LMCD1-204ENST00000426878 RGS21Q2M5E4 152 aa12.49□□□□□ -0.41
LMCD1-204ENST00000426878 RNF182Q8N6D2 247 aa12.49□□□□□ -0.41
LMCD1-204ENST00000426878 OR11H7Q8NGC8 314 aa12.49□□□□□ -0.41
LMCD1-204ENST00000426878 LRRC20Q8TCA0 184 aa12.49□□□□□ -0.41
LMCD1-204ENST00000426878 ASB13Q8WXK3 278 aa12.49□□□□□ -0.41
LMCD1-204ENST00000426878 ATP5SQ99766 215 aa12.49□□□□□ -0.41
LMCD1-204ENST00000426878 SLC50A1Q9BRV3 221 aa12.49□□□□□ -0.41
LMCD1-204ENST00000426878 ZNF331Q9NQX6 463 aaPredicted RBP12.49□□□□□ -0.41
LMCD1-204ENST00000426878 KCNIP2Q9NS61 270 aa12.49□□□□□ -0.41
LMCD1-204ENST00000426878 SACSQ9NZJ4 4579 aa12.48□□□□□ -0.41
LMCD1-204ENST00000426878 DUSP14O95147 198 aaKnown RBP12.48□□□□□ -0.41
LMCD1-204ENST00000426878 GUK1Q16774 197 aa12.48□□□□□ -0.41
LMCD1-204ENST00000426878 IGFL4Q6B9Z1 124 aa12.48□□□□□ -0.41
LMCD1-204ENST00000426878 ZNF705AQ6ZN79 300 aaPredicted RBP12.48□□□□□ -0.41
LMCD1-204ENST00000426878 SAT2Q96F10 170 aaPredicted RBP12.48□□□□□ -0.41
LMCD1-204ENST00000426878 TRAV5A0A0B4J249 113 aa12.47□□□□□ -0.41
LMCD1-204ENST00000426878 IGHV4-28A0A0C4DH34 117 aa12.47□□□□□ -0.41
LMCD1-204ENST00000426878 AMTNQ6UX39 209 aa12.47□□□□□ -0.41
LMCD1-204ENST00000426878 ZNF738Q8NE65 137 aa12.47□□□□□ -0.41
LMCD1-204ENST00000426878 NEU1Q99519 415 aa12.47□□□□□ -0.41
LMCD1-204ENST00000426878 SLC35B3Q9H1N7 401 aa12.47□□□□□ -0.41
LMCD1-204ENST00000426878 TMEM14CQ9P0S9 112 aa12.47□□□□□ -0.41
LMCD1-204ENST00000426878 ZNF705FA8MVS1 300 aaPredicted RBP12.46□□□□□ -0.41
LMCD1-204ENST00000426878 H3BQ15 152 aa12.46□□□□□ -0.41
LMCD1-204ENST00000426878 ZNF705DP0CH99 300 aaPredicted RBP12.46□□□□□ -0.41
LMCD1-204ENST00000426878 ZNF705BP0CI00 300 aaPredicted RBP12.46□□□□□ -0.41
LMCD1-204ENST00000426878 RBMY1A1P0DJD3 496 aaKnown RBP12.46□□□□□ -0.41
LMCD1-204ENST00000426878 RBMY1CP0DJD4 496 aa12.46□□□□□ -0.41
LMCD1-204ENST00000426878 CNN1P51911 297 aaKnown RBP12.46□□□□□ -0.41
LMCD1-204ENST00000426878 OXA1LQ15070 435 aa12.46□□□□□ -0.41
LMCD1-204ENST00000426878 RBMY1FQ15415 496 aaKnown RBP12.46□□□□□ -0.41
LMCD1-204ENST00000426878 PARD6GQ9BYG4 376 aaPredicted RBP12.46□□□□□ -0.41
LMCD1-204ENST00000426878 MFFQ9GZY8 342 aa12.46□□□□□ -0.41
LMCD1-204ENST00000426878 PLECQ15149 4684 aaKnown RBP12.46□□□□□ -0.41
LMCD1-204ENST00000426878 CXorf65A6NEN9 183 aa12.45□□□□□ -0.42
LMCD1-204ENST00000426878 NUPR2A6NF83 97 aa12.45□□□□□ -0.42
LMCD1-204ENST00000426878 C17orf112F2Z3M2 114 aa12.45□□□□□ -0.42
LMCD1-204ENST00000426878 ZNF253O75346 499 aa12.45□□□□□ -0.42
LMCD1-204ENST00000426878 AMBPP02760 352 aa12.45□□□□□ -0.42
LMCD1-204ENST00000426878 HLA-DMBP28068 263 aa12.45□□□□□ -0.42
LMCD1-204ENST00000426878 GCSAMLQ5JQS6 135 aa12.45□□□□□ -0.42
LMCD1-204ENST00000426878 OR8A1Q8NGG7 326 aa12.45□□□□□ -0.42
LMCD1-204ENST00000426878 C11orf45Q8TAV5 145 aa12.45□□□□□ -0.42
LMCD1-204ENST00000426878 RYR3Q15413 4870 aa12.45□□□□□ -0.42
LMCD1-204ENST00000426878 SMIM9A6NGZ8 99 aa12.45□□□□□ -0.42
LMCD1-204ENST00000426878 DEFB4AO15263 64 aa12.45□□□□□ -0.42
LMCD1-204ENST00000426878 IFNA5P01569 189 aa12.45□□□□□ -0.42
LMCD1-204ENST00000426878 GIPP09681 153 aaPredicted RBP12.45□□□□□ -0.42
LMCD1-204ENST00000426878 FXYD7P58549 80 aa12.45□□□□□ -0.42
LMCD1-204ENST00000426878 CEMP1Q6PRD7 247 aaPredicted RBP12.45□□□□□ -0.42
LMCD1-204ENST00000426878 RPUSD4Q96CM3 377 aaKnown RBP12.45□□□□□ -0.42
LMCD1-204ENST00000426878 LCE6AA0A183 80 aa12.44□□□□□ -0.42
LMCD1-204ENST00000426878 SLC17A3O00476 420 aa12.44□□□□□ -0.42
LMCD1-204ENST00000426878 SNRPCP09234 159 aaKnown RBP12.44□□□□□ -0.42
LMCD1-204ENST00000426878 PMS2P11Q13670 270 aa12.44□□□□□ -0.42
LMCD1-204ENST00000426878 ZNF586Q9NXT0 402 aa12.44□□□□□ -0.42
LMCD1-204ENST00000426878 TRBV19A0A075B6N1 114 aa12.43□□□□□ -0.42
LMCD1-204ENST00000426878 HIST1H1EP10412 219 aaKnown RBP12.43□□□□□ -0.42
LMCD1-204ENST00000426878 PDE6HQ13956 83 aa12.43□□□□□ -0.42
LMCD1-204ENST00000426878 SCGB1C1Q8TD33 95 aa12.43□□□□□ -0.42
LMCD1-204ENST00000426878 FAM167A-AS1Q96KT0 104 aa12.43□□□□□ -0.42
LMCD1-204ENST00000426878 IGF2BP2-AS1Q96M15 143 aa12.43□□□□□ -0.42
LMCD1-204ENST00000426878 MRPL32Q9BYC8 188 aaKnown RBP12.43□□□□□ -0.42
LMCD1-204ENST00000426878 SMIM3Q9BZL3 60 aa12.43□□□□□ -0.42
LMCD1-204ENST00000426878 WFDC1Q9HC57 220 aa12.43□□□□□ -0.42
LMCD1-204ENST00000426878 H3BTX0 84 aa12.42□□□□□ -0.42
LMCD1-204ENST00000426878 NANOS2P60321 138 aaKnown RBP12.42□□□□□ -0.42
LMCD1-204ENST00000426878 HIST1H1AQ02539 215 aaPredicted RBP12.42□□□□□ -0.42
LMCD1-204ENST00000426878 C1orf158Q8N1D5 194 aa12.42□□□□□ -0.42
LMCD1-204ENST00000426878 PHLDA1Q8WV24 401 aaPredicted RBP12.42□□□□□ -0.42
LMCD1-204ENST00000426878 AQP10Q96PS8 301 aa12.42□□□□□ -0.42
LMCD1-204ENST00000426878 SLC25A2Q9BXI2 301 aa12.42□□□□□ -0.42
LMCD1-204ENST00000426878 GOLT1BQ9Y3E0 138 aa12.42□□□□□ -0.42
LMCD1-204ENST00000426878 MIR17HGQ75NE6 70 aa12.41□□□□□ -0.42
LMCD1-204ENST00000426878 MRPL53Q96EL3 112 aaKnown RBP12.41□□□□□ -0.42
LMCD1-204ENST00000426878 KLK5Q9Y337 293 aaPredicted RBP12.41□□□□□ -0.42
LMCD1-204ENST00000426878 DNAH1Q9P2D7 4330 aa12.41□□□□□ -0.42
LMCD1-204ENST00000426878 TMEM189A5PLL7 270 aa12.4□□□□□ -0.42
LMCD1-204ENST00000426878 BOLA2-SMG1P6H3BVE0 249 aa12.4□□□□□ -0.42
LMCD1-204ENST00000426878 CRXO43186 299 aaPredicted RBP12.4□□□□□ -0.42
LMCD1-204ENST00000426878 NDUFB4O95168 129 aa12.4□□□□□ -0.42
LMCD1-204ENST00000426878 SPINK13Q1W4C9 94 aa12.4□□□□□ -0.42
LMCD1-204ENST00000426878 Q5BKY6 102 aa12.4□□□□□ -0.42
LMCD1-204ENST00000426878 FFAR4Q5NUL3 377 aa12.4□□□□□ -0.42
LMCD1-204ENST00000426878 FUT9Q9Y231 359 aa12.4□□□□□ -0.42
LMCD1-204ENST00000426878 M0R2Z0 102 aa12.39□□□□□ -0.43
LMCD1-204ENST00000426878 PYYP10082 97 aa12.39□□□□□ -0.43
LMCD1-204ENST00000426878 RHOBP62745 196 aa12.39□□□□□ -0.43
LMCD1-204ENST00000426878 OR51M1Q9H341 326 aa12.39□□□□□ -0.43
LMCD1-204ENST00000426878 PRELID1Q9Y255 219 aa12.39□□□□□ -0.43
LMCD1-204ENST00000426878 TIMM9Q9Y5J7 89 aa12.39□□□□□ -0.43
LMCD1-204ENST00000426878 RFNGQ9Y644 331 aa12.39□□□□□ -0.43
LMCD1-204ENST00000426878 IGHV3OR16-12A0A075B7B8 117 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms