RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 APOHP02749 345 aaPredicted RBP11.35□□□□□ -0.59
ERCC3-202ENST00000426778 RNASE8Q8TDE3 154 aaKnown RBP11.35□□□□□ -0.59
ERCC3-202ENST00000426778 NGBQ9NPG2 151 aa11.35□□□□□ -0.59
ERCC3-202ENST00000426778 OTORQ9NRC9 128 aa11.35□□□□□ -0.59
ERCC3-202ENST00000426778 KAAG1Q9UBP8 84 aa11.35□□□□□ -0.59
ERCC3-202ENST00000426778 A0A087X0K7 114 aa11.34□□□□□ -0.59
ERCC3-202ENST00000426778 TMEM213A2RRL7 107 aa11.34□□□□□ -0.59
ERCC3-202ENST00000426778 VSTM5A8MXK1 200 aa11.34□□□□□ -0.59
ERCC3-202ENST00000426778 CBY3A6NI87 242 aa11.34□□□□□ -0.59
ERCC3-202ENST00000426778 TRBV19A0A075B6N1 114 aa11.33□□□□□ -0.6
ERCC3-202ENST00000426778 PSG8Q9UQ74 426 aa11.33□□□□□ -0.6
ERCC3-202ENST00000426778 MRPS16Q9Y3D3 137 aaKnown RBP11.33□□□□□ -0.6
ERCC3-202ENST00000426778 COX11Q9Y6N1 276 aa11.33□□□□□ -0.6
ERCC3-202ENST00000426778 OVOL3O00110 214 aa11.33□□□□□ -0.6
ERCC3-202ENST00000426778 HLA-DRB1P01911 266 aa11.33□□□□□ -0.6
ERCC3-202ENST00000426778 APOBEC3AP31941 199 aaPredicted RBP11.33□□□□□ -0.6
ERCC3-202ENST00000426778 WFDC3Q8IUB2 231 aa11.33□□□□□ -0.6
ERCC3-202ENST00000426778 MUC15Q8N387 334 aa11.33□□□□□ -0.6
ERCC3-202ENST00000426778 C8orf31Q8N9H6 132 aa11.33□□□□□ -0.6
ERCC3-202ENST00000426778 Q8TAT8 98 aa11.33□□□□□ -0.6
ERCC3-202ENST00000426778 ZNF492Q9P255 531 aa11.33□□□□□ -0.6
ERCC3-202ENST00000426778 IGKV2-40A0A087WW87 121 aaPredicted RBP11.32□□□□□ -0.6
ERCC3-202ENST00000426778 A0A1B0GUT8 65 aa11.32□□□□□ -0.6
ERCC3-202ENST00000426778 SMKR1H3BMG3 65 aa11.32□□□□□ -0.6
ERCC3-202ENST00000426778 IGKV2D-40P01614 121 aaPredicted RBP11.32□□□□□ -0.6
ERCC3-202ENST00000426778 SIGLEC15Q6ZMC9 328 aa11.32□□□□□ -0.6
ERCC3-202ENST00000426778 BPIFA4PQ86YQ2 179 aa11.32□□□□□ -0.6
ERCC3-202ENST00000426778 RNF125Q96EQ8 232 aa11.32□□□□□ -0.6
ERCC3-202ENST00000426778 RNF24Q9Y225 148 aa11.32□□□□□ -0.6
ERCC3-202ENST00000426778 CD3EP07766 207 aa11.32□□□□□ -0.6
ERCC3-202ENST00000426778 HLA-DMBP28068 263 aa11.32□□□□□ -0.6
ERCC3-202ENST00000426778 CDSNQ15517 529 aa11.32□□□□□ -0.6
ERCC3-202ENST00000426778 ZNF491Q8N8L2 437 aa11.32□□□□□ -0.6
ERCC3-202ENST00000426778 OR8A1Q8NGG7 326 aa11.32□□□□□ -0.6
ERCC3-202ENST00000426778 IFI27P40305 119 aaPredicted RBP11.32□□□□□ -0.6
ERCC3-202ENST00000426778 VAMP3Q15836 100 aa11.32□□□□□ -0.6
ERCC3-202ENST00000426778 JKAMPQ9P055 326 aa11.32□□□□□ -0.6
ERCC3-202ENST00000426778 SPG11Q96JI7 2443 aa11.31□□□□□ -0.6
ERCC3-202ENST00000426778 IGF2-ASQ6U949 168 aa11.31□□□□□ -0.6
ERCC3-202ENST00000426778 ZNF738Q8NE65 137 aa11.31□□□□□ -0.6
ERCC3-202ENST00000426778 PRSS3P2Q8NHM4 247 aa11.31□□□□□ -0.6
ERCC3-202ENST00000426778 NEU4Q8WWR8 484 aaPredicted RBP11.31□□□□□ -0.6
ERCC3-202ENST00000426778 MAP1LC3CQ9BXW4 147 aa11.31□□□□□ -0.6
ERCC3-202ENST00000426778 OR2T8A6NH00 312 aa11.31□□□□□ -0.6
ERCC3-202ENST00000426778 NCBP2LA6PVI3 153 aaKnown RBP11.31□□□□□ -0.6
ERCC3-202ENST00000426778 NPIPB6E9PJ23 425 aa11.31□□□□□ -0.6
ERCC3-202ENST00000426778 PLP1P60201 277 aa11.31□□□□□ -0.6
ERCC3-202ENST00000426778 RBPJQ06330 500 aa11.31□□□□□ -0.6
ERCC3-202ENST00000426778 PVRIGQ6DKI7 326 aa11.31□□□□□ -0.6
ERCC3-202ENST00000426778 AMN1Q8IY45 258 aa11.31□□□□□ -0.6
ERCC3-202ENST00000426778 TMEM75Q8N9X5 138 aa11.31□□□□□ -0.6
ERCC3-202ENST00000426778 SHANK2-AS3Q9BTD1 123 aa11.31□□□□□ -0.6
ERCC3-202ENST00000426778 SCNM1Q9BWG6 230 aa11.31□□□□□ -0.6
ERCC3-202ENST00000426778 GNG7O60262 68 aa11.3□□□□□ -0.6
ERCC3-202ENST00000426778 ZNF672Q499Z4 452 aaPredicted RBP11.3□□□□□ -0.6
ERCC3-202ENST00000426778 CT83Q5H943 113 aa11.3□□□□□ -0.6
ERCC3-202ENST00000426778 IGHV3OR16-13A0A075B7E8 117 aa11.3□□□□□ -0.6
ERCC3-202ENST00000426778 IGHV3-74A0A0B4J1X5 117 aa11.3□□□□□ -0.6
ERCC3-202ENST00000426778 NDPQ00604 133 aa11.3□□□□□ -0.6
ERCC3-202ENST00000426778 CHCHD1Q96BP2 118 aaKnown RBP11.3□□□□□ -0.6
ERCC3-202ENST00000426778 AP5S1Q9NUS5 200 aa11.3□□□□□ -0.6
ERCC3-202ENST00000426778 D6R8Y8 96 aa11.29□□□□□ -0.6
ERCC3-202ENST00000426778 HAX1O00165 279 aa11.29□□□□□ -0.6
ERCC3-202ENST00000426778 OR5AL1P0C617 328 aa11.29□□□□□ -0.6
ERCC3-202ENST00000426778 TCF15Q12870 199 aa11.29□□□□□ -0.6
ERCC3-202ENST00000426778 SLC25A34Q6PIV7 304 aa11.29□□□□□ -0.6
ERCC3-202ENST00000426778 LYZL1Q6UWQ5 148 aa11.29□□□□□ -0.6
ERCC3-202ENST00000426778 ZNF414Q96IQ9 312 aa11.29□□□□□ -0.6
ERCC3-202ENST00000426778 NDFIP1Q9BT67 221 aa11.29□□□□□ -0.6
ERCC3-202ENST00000426778 HIVEP3Q5T1R4 2406 aa11.29□□□□□ -0.6
ERCC3-202ENST00000426778 LOC105371242A0A075B767 164 aa11.29□□□□□ -0.6
ERCC3-202ENST00000426778 H3BRN7 92 aa11.29□□□□□ -0.6
ERCC3-202ENST00000426778 PSG3Q16557 428 aa11.29□□□□□ -0.6
ERCC3-202ENST00000426778 ORAOV1Q8WV07 137 aa11.29□□□□□ -0.6
ERCC3-202ENST00000426778 SMIM12Q96EX1 92 aa11.29□□□□□ -0.6
ERCC3-202ENST00000426778 GFRA4Q9GZZ7 299 aa11.29□□□□□ -0.6
ERCC3-202ENST00000426778 TMEM191AQ9H0A3 160 aa11.29□□□□□ -0.6
ERCC3-202ENST00000426778 B9A039 149 aa11.29□□□□□ -0.6
ERCC3-202ENST00000426778 HSBP1L1C9JCN9 74 aa11.29□□□□□ -0.6
ERCC3-202ENST00000426778 LIPFP07098 398 aa11.29□□□□□ -0.6
ERCC3-202ENST00000426778 IGHV3-66A0A0C4DH42 116 aa11.28□□□□□ -0.6
ERCC3-202ENST00000426778 FOXC1Q12948 553 aa11.28□□□□□ -0.6
ERCC3-202ENST00000426778 UBE2V1Q13404 147 aa11.28□□□□□ -0.6
ERCC3-202ENST00000426778 RNF151Q2KHN1 245 aa11.28□□□□□ -0.6
ERCC3-202ENST00000426778 FA2HQ7L5A8 372 aa11.28□□□□□ -0.6
ERCC3-202ENST00000426778 DYNAPQ8N1N2 210 aa11.28□□□□□ -0.6
ERCC3-202ENST00000426778 NBR2O15453 112 aa11.28□□□□□ -0.6
ERCC3-202ENST00000426778 CRXO43186 299 aaPredicted RBP11.28□□□□□ -0.6
ERCC3-202ENST00000426778 UQCRFS1P47985 274 aa11.28□□□□□ -0.6
ERCC3-202ENST00000426778 OR4C5Q8NGB2 326 aa11.28□□□□□ -0.6
ERCC3-202ENST00000426778 NAA38Q9BRA0 125 aaKnown RBP11.28□□□□□ -0.6
ERCC3-202ENST00000426778 C1RLQ9NZP8 487 aa11.28□□□□□ -0.6
ERCC3-202ENST00000426778 NPIPB5A8MRT5 1133 aa11.27□□□□□ -0.6
ERCC3-202ENST00000426778 PPIFP30405 207 aaKnown RBP11.27□□□□□ -0.6
ERCC3-202ENST00000426778 PCP4P48539 62 aa11.27□□□□□ -0.6
ERCC3-202ENST00000426778 CRYBG3Q68DQ2 2970 aa11.27□□□□□ -0.6
ERCC3-202ENST00000426778 TMEM14CQ9P0S9 112 aa11.27□□□□□ -0.6
ERCC3-202ENST00000426778 GAS8-AS1O95177 125 aa11.27□□□□□ -0.61
ERCC3-202ENST00000426778 BVES-AS1Q5T3Y7 98 aa11.27□□□□□ -0.61
ERCC3-202ENST00000426778 SOX21Q9Y651 276 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms