RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 GATAD1Q8WUU5 269 aa9.24□□□□□ -0.93
GPC1-204ENST00000426280 LINC00052Q96N35 136 aa9.24□□□□□ -0.93
GPC1-204ENST00000426280 MFFQ9GZY8 342 aa9.24□□□□□ -0.93
GPC1-204ENST00000426280 DNAJC4Q9NNZ3 241 aa9.24□□□□□ -0.93
GPC1-204ENST00000426280 DNAH1Q9P2D7 4330 aa9.24□□□□□ -0.93
GPC1-204ENST00000426280 ELOA3CA0A087WX78 387 aaPredicted RBP9.23□□□□□ -0.93
GPC1-204ENST00000426280 CXorf65A6NEN9 183 aa9.23□□□□□ -0.93
GPC1-204ENST00000426280 IGKV3-20P01619 116 aa9.23□□□□□ -0.93
GPC1-204ENST00000426280 FFAR4Q5NUL3 377 aa9.23□□□□□ -0.93
GPC1-204ENST00000426280 RPL7L1Q6DKI1 246 aaKnown RBP9.23□□□□□ -0.93
GPC1-204ENST00000426280 HSD17B11Q8NBQ5 300 aa9.23□□□□□ -0.93
GPC1-204ENST00000426280 OR1L4Q8NGR5 311 aa9.23□□□□□ -0.93
GPC1-204ENST00000426280 PARD6GQ9BYG4 376 aaPredicted RBP9.23□□□□□ -0.93
GPC1-204ENST00000426280 TRAV8-2A0A0B4J237 113 aa9.22□□□□□ -0.93
GPC1-204ENST00000426280 C17orf112F2Z3M2 114 aa9.22□□□□□ -0.93
GPC1-204ENST00000426280 MRPS12O15235 138 aaKnown RBP9.22□□□□□ -0.93
GPC1-204ENST00000426280 EIF3GO75821 320 aaKnown RBP eCLIP9.22□□□□□ -0.93
GPC1-204ENST00000426280 CXCL2P19875 107 aa9.22□□□□□ -0.93
GPC1-204ENST00000426280 CEMP1Q6PRD7 247 aaPredicted RBP9.22□□□□□ -0.93
GPC1-204ENST00000426280 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.22□□□□□ -0.93
GPC1-204ENST00000426280 PFDN5Q99471 154 aa9.22□□□□□ -0.93
GPC1-204ENST00000426280 IGHV4-28A0A0C4DH34 117 aa9.21□□□□□ -0.94
GPC1-204ENST00000426280 HMSDA8MTL9 139 aa9.21□□□□□ -0.94
GPC1-204ENST00000426280 ZNF705EA8MWA4 302 aaPredicted RBP9.21□□□□□ -0.94
GPC1-204ENST00000426280 H3BTX0 84 aa9.21□□□□□ -0.94
GPC1-204ENST00000426280 ATP6V0CP27449 155 aa9.21□□□□□ -0.94
GPC1-204ENST00000426280 HLA-DMBP28068 263 aa9.21□□□□□ -0.94
GPC1-204ENST00000426280 S100A7P31151 101 aa9.21□□□□□ -0.94
GPC1-204ENST00000426280 GALR1P47211 349 aa9.21□□□□□ -0.94
GPC1-204ENST00000426280 ZNF266Q14584 549 aa9.21□□□□□ -0.94
GPC1-204ENST00000426280 FAM78BQ5VT40 261 aa9.21□□□□□ -0.94
GPC1-204ENST00000426280 MORN3Q6PF18 240 aaPredicted RBP9.21□□□□□ -0.94
GPC1-204ENST00000426280 MIR17HGQ75NE6 70 aa9.21□□□□□ -0.94
GPC1-204ENST00000426280 TCTE3Q8IZS6 198 aa9.21□□□□□ -0.94
GPC1-204ENST00000426280 SH3BGRL3Q9H299 93 aa9.21□□□□□ -0.94
GPC1-204ENST00000426280 SEPSECSQ9HD40 501 aaKnown RBP9.21□□□□□ -0.94
GPC1-204ENST00000426280 CYTL1Q9NRR1 136 aa9.21□□□□□ -0.94
GPC1-204ENST00000426280 XCL2Q9UBD3 114 aa9.21□□□□□ -0.94
GPC1-204ENST00000426280 ZNF705DP0CH99 300 aaPredicted RBP9.2□□□□□ -0.94
GPC1-204ENST00000426280 ZNF705BP0CI00 300 aaPredicted RBP9.2□□□□□ -0.94
GPC1-204ENST00000426280 SPP1P10451 314 aa9.2□□□□□ -0.94
GPC1-204ENST00000426280 HLA-DRB4P13762 266 aa9.2□□□□□ -0.94
GPC1-204ENST00000426280 RPL7P18124 248 aaKnown RBP9.2□□□□□ -0.94
GPC1-204ENST00000426280 ATF4P18848 351 aaPredicted RBP9.2□□□□□ -0.94
GPC1-204ENST00000426280 SNRPD3P62318 126 aaKnown RBP9.2□□□□□ -0.94
GPC1-204ENST00000426280 AKAP14Q86UN6 197 aa9.2□□□□□ -0.94
GPC1-204ENST00000426280 KCNRGQ8N5I3 272 aa9.2□□□□□ -0.94
GPC1-204ENST00000426280 PHLDA1Q8WV24 401 aaPredicted RBP9.2□□□□□ -0.94
GPC1-204ENST00000426280 GPR82Q96P67 336 aa9.2□□□□□ -0.94
GPC1-204ENST00000426280 SLC35B3Q9H1N7 401 aa9.2□□□□□ -0.94
GPC1-204ENST00000426280 C11orf68Q9H3H3 251 aaKnown RBP9.2□□□□□ -0.94
GPC1-204ENST00000426280 SAV1Q9H4B6 383 aaPredicted RBP9.2□□□□□ -0.94
GPC1-204ENST00000426280 KCNIP2Q9NS61 270 aa9.2□□□□□ -0.94
GPC1-204ENST00000426280 HLA-DRB4X5D2U9 266 aa9.2□□□□□ -0.94
GPC1-204ENST00000426280 PSMB3P49720 205 aa9.19□□□□□ -0.94
GPC1-204ENST00000426280 RAB2AP61019 212 aa9.19□□□□□ -0.94
GPC1-204ENST00000426280 ZNF767PQ75MW2 155 aa9.19□□□□□ -0.94
GPC1-204ENST00000426280 S100A7AQ86SG5 101 aa9.19□□□□□ -0.94
GPC1-204ENST00000426280 RNF182Q8N6D2 247 aa9.19□□□□□ -0.94
GPC1-204ENST00000426280 C11orf45Q8TAV5 145 aa9.19□□□□□ -0.94
GPC1-204ENST00000426280 FAM167A-AS1Q96KT0 104 aa9.19□□□□□ -0.94
GPC1-204ENST00000426280 C16orf92Q96LL3 132 aa9.19□□□□□ -0.94
GPC1-204ENST00000426280 SLC25A2Q9BXI2 301 aa9.19□□□□□ -0.94
GPC1-204ENST00000426280 CELA1Q9UNI1 258 aa9.19□□□□□ -0.94
GPC1-204ENST00000426280 TIMM9Q9Y5J7 89 aa9.19□□□□□ -0.94
GPC1-204ENST00000426280 ALMS1Q8TCU4 4167 aa9.19□□□□□ -0.94
GPC1-204ENST00000426280 A0A087X0K7 114 aa9.18□□□□□ -0.94
GPC1-204ENST00000426280 BORCS7-ASMTA0A0B4J1R7 106 aa9.18□□□□□ -0.94
GPC1-204ENST00000426280 H3BQ15 152 aa9.18□□□□□ -0.94
GPC1-204ENST00000426280 PRM2P04554 102 aa9.18□□□□□ -0.94
GPC1-204ENST00000426280 PYYP10082 97 aa9.18□□□□□ -0.94
GPC1-204ENST00000426280 ZNF345Q14585 488 aa9.18□□□□□ -0.94
GPC1-204ENST00000426280 FAM122CQ6P4D5 195 aa9.18□□□□□ -0.94
GPC1-204ENST00000426280 FOXI2Q6ZQN5 318 aa9.18□□□□□ -0.94
GPC1-204ENST00000426280 BPIFA4PQ86YQ2 179 aa9.18□□□□□ -0.94
GPC1-204ENST00000426280 OR4B1Q8NGF8 309 aa9.18□□□□□ -0.94
GPC1-204ENST00000426280 LINC00476Q8WZB0 136 aa9.18□□□□□ -0.94
GPC1-204ENST00000426280 ARPC5LQ9BPX5 153 aa9.18□□□□□ -0.94
GPC1-204ENST00000426280 PLA2G2EQ9NZK7 142 aa9.18□□□□□ -0.94
GPC1-204ENST00000426280 FUT9Q9Y231 359 aa9.18□□□□□ -0.94
GPC1-204ENST00000426280 A0A0D9SG52 128 aa9.17□□□□□ -0.94
GPC1-204ENST00000426280 A0A0J9YX75 114 aa9.17□□□□□ -0.94
GPC1-204ENST00000426280 SLC17A3O00476 420 aa9.17□□□□□ -0.94
GPC1-204ENST00000426280 ISLRO14498 428 aa9.17□□□□□ -0.94
GPC1-204ENST00000426280 TAAR5O14804 337 aa9.17□□□□□ -0.94
GPC1-204ENST00000426280 C1QBP02746 253 aa9.17□□□□□ -0.94
GPC1-204ENST00000426280 IGLC2P0DOY2 106 aa9.17□□□□□ -0.94
GPC1-204ENST00000426280 ID1P41134 155 aa9.17□□□□□ -0.94
GPC1-204ENST00000426280 ACOT6Q3I5F7 207 aaPredicted RBP9.17□□□□□ -0.94
GPC1-204ENST00000426280 LGALSLQ3ZCW2 172 aaPredicted RBP9.17□□□□□ -0.94
GPC1-204ENST00000426280 AMTNQ6UX39 209 aa9.17□□□□□ -0.94
GPC1-204ENST00000426280 TMUB2Q71RG4 321 aa9.17□□□□□ -0.94
GPC1-204ENST00000426280 C1orf158Q8N1D5 194 aa9.17□□□□□ -0.94
GPC1-204ENST00000426280 PSMG3Q9BT73 122 aaPredicted RBP9.17□□□□□ -0.94
GPC1-204ENST00000426280 ZNF586Q9NXT0 402 aa9.17□□□□□ -0.94
GPC1-204ENST00000426280 EPPK1P58107 5090 aaKnown RBP9.17□□□□□ -0.94
GPC1-204ENST00000426280 NUPR2A6NF83 97 aa9.16□□□□□ -0.94
GPC1-204ENST00000426280 HMGB3O15347 200 aaKnown RBP9.16□□□□□ -0.94
GPC1-204ENST00000426280 BCL2L11O43521 198 aa9.16□□□□□ -0.94
GPC1-204ENST00000426280 JTBO76095 146 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms