RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 KNCNA6PVL3 124 aa18.08■□□□□ 0.48
VEGFA-209ENST00000425836 H3BTX0 84 aa18.08■□□□□ 0.48
VEGFA-209ENST00000425836 PYYP10082 97 aa18.08■□□□□ 0.48
VEGFA-209ENST00000425836 HAGHQ16775 308 aa18.08■□□□□ 0.48
VEGFA-209ENST00000425836 ZNF586Q9NXT0 402 aa18.08■□□□□ 0.48
VEGFA-209ENST00000425836 LCN15Q6UWW0 184 aa18.07■□□□□ 0.48
VEGFA-209ENST00000425836 LRRC20Q8TCA0 184 aa18.07■□□□□ 0.48
VEGFA-209ENST00000425836 PFDN1O60925 122 aa18.06■□□□□ 0.48
VEGFA-209ENST00000425836 EIF3GO75821 320 aaKnown RBP eCLIP18.06■□□□□ 0.48
VEGFA-209ENST00000425836 MBP02144 154 aa18.06■□□□□ 0.48
VEGFA-209ENST00000425836 HIST1H1EP10412 219 aaKnown RBP18.06■□□□□ 0.48
VEGFA-209ENST00000425836 RPL35AP18077 110 aaKnown RBP18.06■□□□□ 0.48
VEGFA-209ENST00000425836 DEFB1P60022 68 aa18.06■□□□□ 0.48
VEGFA-209ENST00000425836 ACTL10Q5JWF8 245 aa18.06■□□□□ 0.48
VEGFA-209ENST00000425836 FAM122CQ6P4D5 195 aa18.06■□□□□ 0.48
VEGFA-209ENST00000425836 RPP25LQ8N5L8 163 aaKnown RBP18.06■□□□□ 0.48
VEGFA-209ENST00000425836 RNF182Q8N6D2 247 aa18.06■□□□□ 0.48
VEGFA-209ENST00000425836 SAT2Q96F10 170 aaPredicted RBP18.06■□□□□ 0.48
VEGFA-209ENST00000425836 ZNF471Q9BX82 626 aaPredicted RBP18.06■□□□□ 0.48
VEGFA-209ENST00000425836 OR51M1Q9H341 326 aa18.06■□□□□ 0.48
VEGFA-209ENST00000425836 ZNF331Q9NQX6 463 aaPredicted RBP18.06■□□□□ 0.48
VEGFA-209ENST00000425836 A0A1W2PPV4 95 aa18.05■□□□□ 0.48
VEGFA-209ENST00000425836 SLC17A3O00476 420 aa18.05■□□□□ 0.48
VEGFA-209ENST00000425836 GUK1Q16774 197 aa18.05■□□□□ 0.48
VEGFA-209ENST00000425836 SPP1P10451 314 aa18.04■□□□□ 0.48
VEGFA-209ENST00000425836 HLA-DMBP28068 263 aa18.04■□□□□ 0.48
VEGFA-209ENST00000425836 ZFP69Q49AA0 526 aa18.04■□□□□ 0.48
VEGFA-209ENST00000425836 STHQ8IWL8 128 aa18.04■□□□□ 0.48
VEGFA-209ENST00000425836 ZNF503Q96F45 646 aa18.04■□□□□ 0.48
VEGFA-209ENST00000425836 PAXXQ9BUH6 204 aa18.04■□□□□ 0.48
VEGFA-209ENST00000425836 TRBV19A0A075B6N1 114 aa18.04■□□□□ 0.48
VEGFA-209ENST00000425836 TAS2R45P59539 299 aa18.04■□□□□ 0.48
VEGFA-209ENST00000425836 TMEM41BQ5BJD5 291 aa18.04■□□□□ 0.48
VEGFA-209ENST00000425836 SLC50A1Q9BRV3 221 aa18.04■□□□□ 0.48
VEGFA-209ENST00000425836 RPRMQ9NS64 109 aa18.04■□□□□ 0.48
VEGFA-209ENST00000425836 OR7C2O60412 319 aa18.03■□□□□ 0.48
VEGFA-209ENST00000425836 KHDC3LQ587J8 217 aa18.03■□□□□ 0.48
VEGFA-209ENST00000425836 GDF5OSQ5U4N7 250 aa18.03■□□□□ 0.48
VEGFA-209ENST00000425836 RNF141Q8WVD5 230 aa18.03■□□□□ 0.48
VEGFA-209ENST00000425836 FXYD5Q96DB9 178 aa18.03■□□□□ 0.48
VEGFA-209ENST00000425836 OR10J4P0C629 311 aa18.02■□□□□ 0.48
VEGFA-209ENST00000425836 CDC34P49427 236 aaPredicted RBP18.02■□□□□ 0.48
VEGFA-209ENST00000425836 PSG3Q16557 428 aa18.02■□□□□ 0.48
VEGFA-209ENST00000425836 FOXI2Q6ZQN5 318 aa18.02■□□□□ 0.48
VEGFA-209ENST00000425836 TRPT1Q86TN4 253 aaKnown RBP18.02■□□□□ 0.48
VEGFA-209ENST00000425836 SAV1Q9H4B6 383 aaPredicted RBP18.02■□□□□ 0.48
VEGFA-209ENST00000425836 KIR2DL5BA0A0G2JN68 375 aa18.01■□□□□ 0.47
VEGFA-209ENST00000425836 KIR2DL5BA0A0G2JPC4 375 aa18.01■□□□□ 0.47
VEGFA-209ENST00000425836 F6UB75 175 aa18.01■□□□□ 0.47
VEGFA-209ENST00000425836 H3BMM0 161 aa18.01■□□□□ 0.47
VEGFA-209ENST00000425836 ZNF253O75346 499 aa18.01■□□□□ 0.47
VEGFA-209ENST00000425836 NDUFB4O95168 129 aa18.01■□□□□ 0.47
VEGFA-209ENST00000425836 NHLRC4P0CG21 123 aaPredicted RBP18.01■□□□□ 0.47
VEGFA-209ENST00000425836 APOC4P55056 127 aa18.01■□□□□ 0.47
VEGFA-209ENST00000425836 KIR2DL5AQ8N109 375 aa18.01■□□□□ 0.47
VEGFA-209ENST00000425836 KIR2DL5BQ8NHK3 375 aa18.01■□□□□ 0.47
VEGFA-209ENST00000425836 BLNKQ8WV28 456 aa18.01■□□□□ 0.47
VEGFA-209ENST00000425836 RAB24Q969Q5 203 aa18.01■□□□□ 0.47
VEGFA-209ENST00000425836 HMGB3O15347 200 aaKnown RBP18■□□□□ 0.47
VEGFA-209ENST00000425836 NBEAP1P0C6P0 100 aa18■□□□□ 0.47
VEGFA-209ENST00000425836 HLA-DRB4P13762 266 aa18■□□□□ 0.47
VEGFA-209ENST00000425836 PDE6HQ13956 83 aa18■□□□□ 0.47
VEGFA-209ENST00000425836 C9orf62Q8N4C0 152 aa18■□□□□ 0.47
VEGFA-209ENST00000425836 TM2D3Q9BRN9 247 aa18■□□□□ 0.47
VEGFA-209ENST00000425836 HLA-DRB4X5D2U9 266 aa18■□□□□ 0.47
VEGFA-209ENST00000425836 EIF5AP63241 154 aaKnown RBP18■□□□□ 0.47
VEGFA-209ENST00000425836 AKR1C8PQ5T2L2 129 aa18■□□□□ 0.47
VEGFA-209ENST00000425836 BAP18Q8IXM2 172 aa18■□□□□ 0.47
VEGFA-209ENST00000425836 ZNF738Q8NE65 137 aa18■□□□□ 0.47
VEGFA-209ENST00000425836 ACTR3CQ9C0K3 210 aaPredicted RBP18■□□□□ 0.47
VEGFA-209ENST00000425836 CSTL1Q9H114 145 aa18■□□□□ 0.47
VEGFA-209ENST00000425836 SEC11BP0C7V7 166 aa17.99■□□□□ 0.47
VEGFA-209ENST00000425836 UBE2L3P68036 154 aaKnown RBP17.99■□□□□ 0.47
VEGFA-209ENST00000425836 PQLC2Q6ZP29 291 aa17.99■□□□□ 0.47
VEGFA-209ENST00000425836 STOML3Q8TAV4 291 aa17.99■□□□□ 0.47
VEGFA-209ENST00000425836 PLA2G2EQ9NZK7 142 aa17.99■□□□□ 0.47
VEGFA-209ENST00000425836 A0A0J9YX75 114 aa17.98■□□□□ 0.47
VEGFA-209ENST00000425836 EBLN2Q6P2I7 272 aa17.98■□□□□ 0.47
VEGFA-209ENST00000425836 CLEC5AQ9NY25 188 aa17.98■□□□□ 0.47
VEGFA-209ENST00000425836 STAG3L2P0CL84 134 aa17.97■□□□□ 0.47
VEGFA-209ENST00000425836 STAG3L3P0CL85 134 aa17.97■□□□□ 0.47
VEGFA-209ENST00000425836 TPT1P13693 172 aaKnown RBP17.97■□□□□ 0.47
VEGFA-209ENST00000425836 PSG9Q00887 426 aa17.97■□□□□ 0.47
VEGFA-209ENST00000425836 ZNF726P1Q15940 193 aa17.97■□□□□ 0.47
VEGFA-209ENST00000425836 SSX7Q7RTT5 188 aa17.97■□□□□ 0.47
VEGFA-209ENST00000425836 HUWE1Q7Z6Z7 4374 aaKnown RBP17.97■□□□□ 0.47
VEGFA-209ENST00000425836 ZNF705FA8MVS1 300 aaPredicted RBP17.96■□□□□ 0.47
VEGFA-209ENST00000425836 UBE2CO00762 179 aa17.96■□□□□ 0.47
VEGFA-209ENST00000425836 RPUSD4Q96CM3 377 aaKnown RBP17.96■□□□□ 0.47
VEGFA-209ENST00000425836 ARL14EPLP0DKL9 152 aa17.96■□□□□ 0.46
VEGFA-209ENST00000425836 PRB4P10163 310 aaPredicted RBP17.96■□□□□ 0.46
VEGFA-209ENST00000425836 NKX2-5P52952 324 aaPredicted RBP17.96■□□□□ 0.46
VEGFA-209ENST00000425836 PHYHIPLQ96FC7 376 aa17.96■□□□□ 0.46
VEGFA-209ENST00000425836 SPATA25Q9BR10 227 aa17.96■□□□□ 0.46
VEGFA-209ENST00000425836 ZMAT4Q9H898 229 aa17.96■□□□□ 0.46
VEGFA-209ENST00000425836 IGKV3-20P01619 116 aa17.95■□□□□ 0.46
VEGFA-209ENST00000425836 ZNF705DP0CH99 300 aaPredicted RBP17.95■□□□□ 0.46
VEGFA-209ENST00000425836 ZNF705BP0CI00 300 aaPredicted RBP17.95■□□□□ 0.46
VEGFA-209ENST00000425836 EXOC3-AS1Q8N2X6 119 aa17.95■□□□□ 0.46
VEGFA-209ENST00000425836 OR4B1Q8NGF8 309 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms