RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 ZNF709Q8N972 641 aa9.16□□□□□ -0.94
SGCE-203ENST00000425444 ZNF738Q8NE65 137 aa9.16□□□□□ -0.94
SGCE-203ENST00000425444 C17orf77Q96MU5 243 aa9.16□□□□□ -0.94
SGCE-203ENST00000425444 CLUHP3Q96NS8 147 aa9.16□□□□□ -0.94
SGCE-203ENST00000425444 MGST2Q99735 147 aa9.16□□□□□ -0.94
SGCE-203ENST00000425444 GOLT1BQ9Y3E0 138 aa9.16□□□□□ -0.94
SGCE-203ENST00000425444 TRAV8-2A0A0B4J237 113 aa9.15□□□□□ -0.94
SGCE-203ENST00000425444 IGLL5B9A064 214 aa9.15□□□□□ -0.94
SGCE-203ENST00000425444 DUSP14O95147 198 aaKnown RBP9.15□□□□□ -0.94
SGCE-203ENST00000425444 SULT1A1P50225 295 aa9.15□□□□□ -0.94
SGCE-203ENST00000425444 EMP1P54849 157 aa9.15□□□□□ -0.94
SGCE-203ENST00000425444 HBG1P69891 147 aa9.15□□□□□ -0.94
SGCE-203ENST00000425444 HBG2P69892 147 aa9.15□□□□□ -0.94
SGCE-203ENST00000425444 PATE2Q6UY27 113 aa9.15□□□□□ -0.94
SGCE-203ENST00000425444 ZNF705AQ6ZN79 300 aaPredicted RBP9.15□□□□□ -0.94
SGCE-203ENST00000425444 Q6ZRG5 221 aa9.15□□□□□ -0.94
SGCE-203ENST00000425444 NRARPQ7Z6K4 114 aa9.15□□□□□ -0.94
SGCE-203ENST00000425444 C11orf1Q9H5F2 150 aa9.15□□□□□ -0.94
SGCE-203ENST00000425444 LYRM2Q9NU23 88 aaPredicted RBP9.15□□□□□ -0.94
SGCE-203ENST00000425444 CELA1Q9UNI1 258 aa9.15□□□□□ -0.94
SGCE-203ENST00000425444 A0A087X0K7 114 aa9.14□□□□□ -0.95
SGCE-203ENST00000425444 TRAV10A0A0B4J240 114 aa9.14□□□□□ -0.95
SGCE-203ENST00000425444 IGSF23A1L1A6 192 aa9.14□□□□□ -0.95
SGCE-203ENST00000425444 TMEM189A5PLL7 270 aa9.14□□□□□ -0.95
SGCE-203ENST00000425444 ZNF705FA8MVS1 300 aaPredicted RBP9.14□□□□□ -0.95
SGCE-203ENST00000425444 INMT-MINDY4F8WBC2 141 aa9.14□□□□□ -0.95
SGCE-203ENST00000425444 PRAF2O60831 178 aa9.14□□□□□ -0.95
SGCE-203ENST00000425444 SIX6O95475 246 aa9.14□□□□□ -0.95
SGCE-203ENST00000425444 ZNF705DP0CH99 300 aaPredicted RBP9.14□□□□□ -0.95
SGCE-203ENST00000425444 ZNF705BP0CI00 300 aaPredicted RBP9.14□□□□□ -0.95
SGCE-203ENST00000425444 S100A11P31949 105 aa9.14□□□□□ -0.95
SGCE-203ENST00000425444 CNN1P51911 297 aaKnown RBP9.14□□□□□ -0.95
SGCE-203ENST00000425444 DEFA1P59665 94 aa9.14□□□□□ -0.95
SGCE-203ENST00000425444 DEFA3P59666 94 aa9.14□□□□□ -0.95
SGCE-203ENST00000425444 C10orf113Q5VZT2 155 aa9.14□□□□□ -0.95
SGCE-203ENST00000425444 ZNF767PQ75MW2 155 aa9.14□□□□□ -0.95
SGCE-203ENST00000425444 BPIFA4PQ86YQ2 179 aa9.14□□□□□ -0.95
SGCE-203ENST00000425444 TMEM252Q8N6L7 170 aa9.14□□□□□ -0.95
SGCE-203ENST00000425444 NEU1Q99519 415 aa9.14□□□□□ -0.95
SGCE-203ENST00000425444 TMEM208Q9BTX3 173 aa9.14□□□□□ -0.95
SGCE-203ENST00000425444 RFNGQ9Y644 331 aa9.14□□□□□ -0.95
SGCE-203ENST00000425444 SMIM9A6NGZ8 99 aa9.13□□□□□ -0.95
SGCE-203ENST00000425444 HBE1P02100 147 aa9.13□□□□□ -0.95
SGCE-203ENST00000425444 RLN2P04090 185 aa9.13□□□□□ -0.95
SGCE-203ENST00000425444 CXCL2P19875 107 aa9.13□□□□□ -0.95
SGCE-203ENST00000425444 TCTAP57738 103 aa9.13□□□□□ -0.95
SGCE-203ENST00000425444 IFITM3Q01628 133 aa9.13□□□□□ -0.95
SGCE-203ENST00000425444 HIST1H1AQ02539 215 aaPredicted RBP9.13□□□□□ -0.95
SGCE-203ENST00000425444 LRRC37A5PQ49AS3 106 aa9.13□□□□□ -0.95
SGCE-203ENST00000425444 MIC13Q5XKP0 118 aa9.13□□□□□ -0.95
SGCE-203ENST00000425444 LCN15Q6UWW0 184 aa9.13□□□□□ -0.95
SGCE-203ENST00000425444 OR1L4Q8NGR5 311 aa9.13□□□□□ -0.95
SGCE-203ENST00000425444 PPP1R14DQ9NXH3 145 aa9.13□□□□□ -0.95
SGCE-203ENST00000425444 WDR83OSQ9Y284 106 aa9.13□□□□□ -0.95
SGCE-203ENST00000425444 UBR4Q5T4S7 5183 aa9.13□□□□□ -0.95
SGCE-203ENST00000425444 M0R2Z0 102 aa9.12□□□□□ -0.95
SGCE-203ENST00000425444 INSP01308 110 aa9.12□□□□□ -0.95
SGCE-203ENST00000425444 AMBPP02760 352 aa9.12□□□□□ -0.95
SGCE-203ENST00000425444 SNRPCP09234 159 aaKnown RBP9.12□□□□□ -0.95
SGCE-203ENST00000425444 CXCL3P19876 107 aa9.12□□□□□ -0.95
SGCE-203ENST00000425444 FGF7P21781 194 aa9.12□□□□□ -0.95
SGCE-203ENST00000425444 RHOBP62745 196 aa9.12□□□□□ -0.95
SGCE-203ENST00000425444 IL15RAQ13261 267 aa9.12□□□□□ -0.95
SGCE-203ENST00000425444 OPCMLQ14982 345 aa9.12□□□□□ -0.95
SGCE-203ENST00000425444 PSG3Q16557 428 aa9.12□□□□□ -0.95
SGCE-203ENST00000425444 SPINK13Q1W4C9 94 aa9.12□□□□□ -0.95
SGCE-203ENST00000425444 VWC2Q2TAL6 325 aa9.12□□□□□ -0.95
SGCE-203ENST00000425444 ZNF575Q86XF7 245 aa9.12□□□□□ -0.95
SGCE-203ENST00000425444 OR11H7Q8NGC8 314 aa9.12□□□□□ -0.95
SGCE-203ENST00000425444 TMEM37Q8WXS4 190 aa9.12□□□□□ -0.95
SGCE-203ENST00000425444 IGF2BP2-AS1Q96M15 143 aa9.12□□□□□ -0.95
SGCE-203ENST00000425444 PFDN5Q99471 154 aa9.12□□□□□ -0.95
SGCE-203ENST00000425444 BATF3Q9NR55 127 aa9.12□□□□□ -0.95
SGCE-203ENST00000425444 DEFB131BA0A096LNP1 70 aa9.11□□□□□ -0.95
SGCE-203ENST00000425444 TEX48A0A1B0GUV7 120 aa9.11□□□□□ -0.95
SGCE-203ENST00000425444 LOC102723971A0A1B0GUV8 181 aa9.11□□□□□ -0.95
SGCE-203ENST00000425444 A8MTW9 85 aa9.11□□□□□ -0.95
SGCE-203ENST00000425444 E5RGE8 158 aa9.11□□□□□ -0.95
SGCE-203ENST00000425444 MRPS12O15235 138 aaKnown RBP9.11□□□□□ -0.95
SGCE-203ENST00000425444 SSNA1O43805 119 aa9.11□□□□□ -0.95
SGCE-203ENST00000425444 SPART-AS1P0CW21 52 aa9.11□□□□□ -0.95
SGCE-203ENST00000425444 B2MP61769 119 aa9.11□□□□□ -0.95
SGCE-203ENST00000425444 ATP6V1FQ16864 119 aa9.11□□□□□ -0.95
SGCE-203ENST00000425444 RRN3P1Q2M238 152 aa9.11□□□□□ -0.95
SGCE-203ENST00000425444 C12orf74Q32Q52 190 aa9.11□□□□□ -0.95
SGCE-203ENST00000425444 MORN5Q5VZ52 161 aa9.11□□□□□ -0.95
SGCE-203ENST00000425444 AMTNQ6UX39 209 aa9.11□□□□□ -0.95
SGCE-203ENST00000425444 C1orf158Q8N1D5 194 aa9.11□□□□□ -0.95
SGCE-203ENST00000425444 MAPKAPK5-AS1Q8N8E1 139 aa9.11□□□□□ -0.95
SGCE-203ENST00000425444 OR8A1Q8NGG7 326 aa9.11□□□□□ -0.95
SGCE-203ENST00000425444 RPUSD4Q96CM3 377 aaKnown RBP9.11□□□□□ -0.95
SGCE-203ENST00000425444 SLC50A1Q9BRV3 221 aa9.11□□□□□ -0.95
SGCE-203ENST00000425444 NMES1Q9C002 83 aa9.11□□□□□ -0.95
SGCE-203ENST00000425444 DNAJC4Q9NNZ3 241 aa9.11□□□□□ -0.95
SGCE-203ENST00000425444 IGHV4-4A0A075B6R2 117 aa9.1□□□□□ -0.95
SGCE-203ENST00000425444 H3BTX0 84 aa9.1□□□□□ -0.95
SGCE-203ENST00000425444 BOLA2-SMG1P6H3BVE0 249 aa9.1□□□□□ -0.95
SGCE-203ENST00000425444 PRB4P10163 310 aaPredicted RBP9.1□□□□□ -0.95
SGCE-203ENST00000425444 RPL29P47914 159 aaKnown RBP9.1□□□□□ -0.95
SGCE-203ENST00000425444 CYCSP99999 105 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms