RNA–Protein interactions for RNA: ENST00000424964.6

TMEM248-204, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-204ENST00000424964 A0A1W2PPV4 95 aa10.9□□□□□ -0.66
TMEM248-204ENST00000424964 IGKV3-20P01619 116 aa10.9□□□□□ -0.66
TMEM248-204ENST00000424964 PYYP10082 97 aa10.9□□□□□ -0.66
TMEM248-204ENST00000424964 HIST1H1EP10412 219 aaKnown RBP10.9□□□□□ -0.66
TMEM248-204ENST00000424964 CXCL2P19875 107 aa10.9□□□□□ -0.66
TMEM248-204ENST00000424964 M6PRP20645 277 aa10.9□□□□□ -0.66
TMEM248-204ENST00000424964 HLA-DMBP28068 263 aa10.9□□□□□ -0.66
TMEM248-204ENST00000424964 GUK1Q16774 197 aa10.9□□□□□ -0.66
TMEM248-204ENST00000424964 GDF5OSQ5U4N7 250 aa10.9□□□□□ -0.66
TMEM248-204ENST00000424964 FOXI2Q6ZQN5 318 aa10.9□□□□□ -0.66
TMEM248-204ENST00000424964 KCNRGQ8N5I3 272 aa10.9□□□□□ -0.66
TMEM248-204ENST00000424964 ZNF738Q8NE65 137 aa10.9□□□□□ -0.66
TMEM248-204ENST00000424964 GNPNAT1Q96EK6 184 aaPredicted RBP10.9□□□□□ -0.66
TMEM248-204ENST00000424964 FAM167A-AS1Q96KT0 104 aa10.9□□□□□ -0.66
TMEM248-204ENST00000424964 SLC50A1Q9BRV3 221 aa10.9□□□□□ -0.66
TMEM248-204ENST00000424964 PSMG3Q9BT73 122 aaPredicted RBP10.9□□□□□ -0.66
TMEM248-204ENST00000424964 SAV1Q9H4B6 383 aaPredicted RBP10.9□□□□□ -0.66
TMEM248-204ENST00000424964 ZNF586Q9NXT0 402 aa10.9□□□□□ -0.66
TMEM248-204ENST00000424964 TMEM14CQ9P0S9 112 aa10.9□□□□□ -0.66
TMEM248-204ENST00000424964 DNAH9Q9NYC9 4486 aa10.89□□□□□ -0.67
TMEM248-204ENST00000424964 A0A0D9SG52 128 aa10.89□□□□□ -0.67
TMEM248-204ENST00000424964 F6UB75 175 aa10.89□□□□□ -0.67
TMEM248-204ENST00000424964 H3BMM0 161 aa10.89□□□□□ -0.67
TMEM248-204ENST00000424964 OR7C2O60412 319 aa10.89□□□□□ -0.67
TMEM248-204ENST00000424964 JTBO76095 146 aa10.89□□□□□ -0.67
TMEM248-204ENST00000424964 CA1P00915 261 aaPredicted RBP10.89□□□□□ -0.67
TMEM248-204ENST00000424964 HLA-DRB4P13762 266 aa10.89□□□□□ -0.67
TMEM248-204ENST00000424964 TAS2R45P59539 299 aa10.89□□□□□ -0.67
TMEM248-204ENST00000424964 RAB2AP61019 212 aa10.89□□□□□ -0.67
TMEM248-204ENST00000424964 ZNF345Q14585 488 aa10.89□□□□□ -0.67
TMEM248-204ENST00000424964 PSG3Q16557 428 aa10.89□□□□□ -0.67
TMEM248-204ENST00000424964 DEFB135Q30KP9 77 aa10.89□□□□□ -0.67
TMEM248-204ENST00000424964 FAM122CQ6P4D5 195 aa10.89□□□□□ -0.67
TMEM248-204ENST00000424964 MORN3Q6PF18 240 aaPredicted RBP10.89□□□□□ -0.67
TMEM248-204ENST00000424964 Q6ZWC4 215 aa10.89□□□□□ -0.67
TMEM248-204ENST00000424964 AKAP14Q86UN6 197 aa10.89□□□□□ -0.67
TMEM248-204ENST00000424964 TCTE3Q8IZS6 198 aa10.89□□□□□ -0.67
TMEM248-204ENST00000424964 OR4B1Q8NGF8 309 aa10.89□□□□□ -0.67
TMEM248-204ENST00000424964 OR10G4Q8NGN3 311 aa10.89□□□□□ -0.67
TMEM248-204ENST00000424964 OR10G9Q8NGN4 311 aa10.89□□□□□ -0.67
TMEM248-204ENST00000424964 OR10G7Q8NGN6 311 aa10.89□□□□□ -0.67
TMEM248-204ENST00000424964 BLNKQ8WV28 456 aa10.89□□□□□ -0.67
TMEM248-204ENST00000424964 ARPC5LQ9BPX5 153 aa10.89□□□□□ -0.67
TMEM248-204ENST00000424964 PAXXQ9BUH6 204 aa10.89□□□□□ -0.67
TMEM248-204ENST00000424964 SH3BGRL3Q9H299 93 aa10.89□□□□□ -0.67
TMEM248-204ENST00000424964 OR51M1Q9H341 326 aa10.89□□□□□ -0.67
TMEM248-204ENST00000424964 ZNF331Q9NQX6 463 aaPredicted RBP10.89□□□□□ -0.67
TMEM248-204ENST00000424964 HLA-DRB4X5D2U9 266 aa10.89□□□□□ -0.67
TMEM248-204ENST00000424964 SLC17A3O00476 420 aa10.88□□□□□ -0.67
TMEM248-204ENST00000424964 SPP1P10451 314 aa10.88□□□□□ -0.67
TMEM248-204ENST00000424964 SERF2P84101 59 aa10.88□□□□□ -0.67
TMEM248-204ENST00000424964 OR2G3Q8NGZ4 309 aa10.88□□□□□ -0.67
TMEM248-204ENST00000424964 SAT2Q96F10 170 aaPredicted RBP10.88□□□□□ -0.67
TMEM248-204ENST00000424964 CYTL1Q9NRR1 136 aa10.88□□□□□ -0.67
TMEM248-204ENST00000424964 TRBV19A0A075B6N1 114 aa10.87□□□□□ -0.67
TMEM248-204ENST00000424964 A0A0J9YX75 114 aa10.87□□□□□ -0.67
TMEM248-204ENST00000424964 A0A1B0GVG6 124 aa10.87□□□□□ -0.67
TMEM248-204ENST00000424964 KANTRA0A1W2PQU2 76 aa10.87□□□□□ -0.67
TMEM248-204ENST00000424964 SPRY2O43597 315 aa10.87□□□□□ -0.67
TMEM248-204ENST00000424964 EIF3GO75821 320 aaKnown RBP eCLIP10.87□□□□□ -0.67
TMEM248-204ENST00000424964 MBP02144 154 aa10.87□□□□□ -0.67
TMEM248-204ENST00000424964 OR10J4P0C629 311 aa10.87□□□□□ -0.67
TMEM248-204ENST00000424964 NBEAP1P0C6P0 100 aa10.87□□□□□ -0.67
TMEM248-204ENST00000424964 NUTF2P61970 127 aaKnown RBP10.87□□□□□ -0.67
TMEM248-204ENST00000424964 KHDC3LQ587J8 217 aa10.87□□□□□ -0.67
TMEM248-204ENST00000424964 RNF141Q8WVD5 230 aa10.87□□□□□ -0.67
TMEM248-204ENST00000424964 OVOL2Q9BRP0 275 aa10.87□□□□□ -0.67
TMEM248-204ENST00000424964 CLEC5AQ9NY25 188 aa10.87□□□□□ -0.67
TMEM248-204ENST00000424964 ZNF705DP0CH99 300 aaPredicted RBP10.86□□□□□ -0.67
TMEM248-204ENST00000424964 ZNF705BP0CI00 300 aaPredicted RBP10.86□□□□□ -0.67
TMEM248-204ENST00000424964 PRB4P10163 310 aaPredicted RBP10.86□□□□□ -0.67
TMEM248-204ENST00000424964 RPUSD4Q96CM3 377 aaKnown RBP10.86□□□□□ -0.67
TMEM248-204ENST00000424964 RNF183Q96D59 192 aa10.86□□□□□ -0.67
TMEM248-204ENST00000424964 TP53TG1Q9Y2A0 90 aa10.86□□□□□ -0.67
TMEM248-204ENST00000424964 COL7A1Q02388 2944 aa10.86□□□□□ -0.67
TMEM248-204ENST00000424964 ZNF705FA8MVS1 300 aaPredicted RBP10.85□□□□□ -0.67
TMEM248-204ENST00000424964 HMGB3O15347 200 aaKnown RBP10.85□□□□□ -0.67
TMEM248-204ENST00000424964 PFDN1O60925 122 aa10.85□□□□□ -0.67
TMEM248-204ENST00000424964 ZNF253O75346 499 aa10.85□□□□□ -0.67
TMEM248-204ENST00000424964 DUSP14O95147 198 aaKnown RBP10.85□□□□□ -0.67
TMEM248-204ENST00000424964 C1QBP02746 253 aa10.85□□□□□ -0.67
TMEM248-204ENST00000424964 C4BPBP20851 252 aa10.85□□□□□ -0.67
TMEM248-204ENST00000424964 CDC34P49427 236 aaPredicted RBP10.85□□□□□ -0.67
TMEM248-204ENST00000424964 FXYD7P58549 80 aa10.85□□□□□ -0.67
TMEM248-204ENST00000424964 UBE2L3P68036 154 aaKnown RBP10.85□□□□□ -0.67
TMEM248-204ENST00000424964 PSG9Q00887 426 aa10.85□□□□□ -0.67
TMEM248-204ENST00000424964 PDE6HQ13956 83 aa10.85□□□□□ -0.67
TMEM248-204ENST00000424964 TMEM41BQ5BJD5 291 aa10.85□□□□□ -0.67
TMEM248-204ENST00000424964 TMUB2Q71RG4 321 aa10.85□□□□□ -0.67
TMEM248-204ENST00000424964 FXYD5Q96DB9 178 aa10.85□□□□□ -0.67
TMEM248-204ENST00000424964 ZNF471Q9BX82 626 aaPredicted RBP10.85□□□□□ -0.67
TMEM248-204ENST00000424964 AAMDCQ9H7C9 122 aa10.85□□□□□ -0.67
TMEM248-204ENST00000424964 BCL2L11O43521 198 aa10.84□□□□□ -0.67
TMEM248-204ENST00000424964 NDUFB4O95168 129 aa10.84□□□□□ -0.67
TMEM248-204ENST00000424964 GIG44P09565 113 aaPredicted RBP10.84□□□□□ -0.67
TMEM248-204ENST00000424964 CNN1P51911 297 aaKnown RBP10.84□□□□□ -0.67
TMEM248-204ENST00000424964 HIST1H1AQ02539 215 aaPredicted RBP10.84□□□□□ -0.67
TMEM248-204ENST00000424964 AKR1C8PQ5T2L2 129 aa10.84□□□□□ -0.67
TMEM248-204ENST00000424964 PQLC2Q6ZP29 291 aa10.84□□□□□ -0.67
TMEM248-204ENST00000424964 RPP25LQ8N5L8 163 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms