RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 C17orf112F2Z3M2 114 aa7.97□□□□□ -1.13
USP49-204ENST00000423567 H0YIZ8 118 aa7.97□□□□□ -1.13
USP49-204ENST00000423567 DUSP14O95147 198 aaKnown RBP7.97□□□□□ -1.13
USP49-204ENST00000423567 GIG44P09565 113 aaPredicted RBP7.97□□□□□ -1.13
USP49-204ENST00000423567 MIFP14174 115 aa7.97□□□□□ -1.13
USP49-204ENST00000423567 CXCL2P19875 107 aa7.97□□□□□ -1.13
USP49-204ENST00000423567 DEFB1P60022 68 aa7.97□□□□□ -1.13
USP49-204ENST00000423567 PSG9Q00887 426 aa7.97□□□□□ -1.13
USP49-204ENST00000423567 FAM78BQ5VT40 261 aa7.97□□□□□ -1.13
USP49-204ENST00000423567 ZNF738Q8NE65 137 aa7.97□□□□□ -1.13
USP49-204ENST00000423567 THAP6Q8TBB0 222 aa7.97□□□□□ -1.13
USP49-204ENST00000423567 C20orf173Q96LM9 149 aa7.97□□□□□ -1.13
USP49-204ENST00000423567 CLUHP3Q96NS8 147 aa7.97□□□□□ -1.13
USP49-204ENST00000423567 SLC50A1Q9BRV3 221 aa7.97□□□□□ -1.13
USP49-204ENST00000423567 NPCDR1Q9BY65 106 aa7.97□□□□□ -1.13
USP49-204ENST00000423567 MFFQ9GZY8 342 aa7.97□□□□□ -1.13
USP49-204ENST00000423567 TRAV8-2A0A0B4J237 113 aa7.96□□□□□ -1.14
USP49-204ENST00000423567 NUPR2A6NF83 97 aa7.96□□□□□ -1.14
USP49-204ENST00000423567 ZNF705EA8MWA4 302 aaPredicted RBP7.96□□□□□ -1.14
USP49-204ENST00000423567 F6UB75 175 aa7.96□□□□□ -1.14
USP49-204ENST00000423567 IFNA5P01569 189 aa7.96□□□□□ -1.14
USP49-204ENST00000423567 IGFL4Q6B9Z1 124 aa7.96□□□□□ -1.14
USP49-204ENST00000423567 RNF182Q8N6D2 247 aa7.96□□□□□ -1.14
USP49-204ENST00000423567 C11orf45Q8TAV5 145 aa7.96□□□□□ -1.14
USP49-204ENST00000423567 C17orf77Q96MU5 243 aa7.96□□□□□ -1.14
USP49-204ENST00000423567 PPP1R14DQ9NXH3 145 aa7.96□□□□□ -1.14
USP49-204ENST00000423567 MBD2Q9UBB5 411 aa7.96□□□□□ -1.14
USP49-204ENST00000423567 HSPB11Q9Y547 144 aa7.96□□□□□ -1.14
USP49-204ENST00000423567 IGHV4-28A0A0C4DH34 117 aa7.95□□□□□ -1.14
USP49-204ENST00000423567 MRPS12O15235 138 aaKnown RBP7.95□□□□□ -1.14
USP49-204ENST00000423567 DEFB4AO15263 64 aa7.95□□□□□ -1.14
USP49-204ENST00000423567 JTBO76095 146 aa7.95□□□□□ -1.14
USP49-204ENST00000423567 CXCL3P19876 107 aa7.95□□□□□ -1.14
USP49-204ENST00000423567 RPL12P30050 165 aaKnown RBP7.95□□□□□ -1.14
USP49-204ENST00000423567 FXYD7P58549 80 aa7.95□□□□□ -1.14
USP49-204ENST00000423567 PSG3Q16557 428 aa7.95□□□□□ -1.14
USP49-204ENST00000423567 GUK1Q16774 197 aa7.95□□□□□ -1.14
USP49-204ENST00000423567 RGS21Q2M5E4 152 aa7.95□□□□□ -1.14
USP49-204ENST00000423567 CSNK1G2-AS1Q8NCQ2 148 aa7.95□□□□□ -1.14
USP49-204ENST00000423567 SCGB1C1Q8TD33 95 aa7.95□□□□□ -1.14
USP49-204ENST00000423567 ATP5SQ99766 215 aa7.95□□□□□ -1.14
USP49-204ENST00000423567 RNF126Q9BV68 326 aa7.95□□□□□ -1.14
USP49-204ENST00000423567 WDR61Q9GZS3 305 aaKnown RBP7.95□□□□□ -1.14
USP49-204ENST00000423567 HRH4Q9H3N8 390 aa7.95□□□□□ -1.14
USP49-204ENST00000423567 KLK5Q9Y337 293 aaPredicted RBP7.95□□□□□ -1.14
USP49-204ENST00000423567 GOLT1BQ9Y3E0 138 aa7.95□□□□□ -1.14
USP49-204ENST00000423567 IGHV3OR16-12A0A075B7B8 117 aa7.94□□□□□ -1.14
USP49-204ENST00000423567 AMBPP02760 352 aa7.94□□□□□ -1.14
USP49-204ENST00000423567 CNN1P51911 297 aaKnown RBP7.94□□□□□ -1.14
USP49-204ENST00000423567 HIST1H1AQ02539 215 aaPredicted RBP7.94□□□□□ -1.14
USP49-204ENST00000423567 FCN2Q15485 313 aa7.94□□□□□ -1.14
USP49-204ENST00000423567 Q8NAQ8 132 aa7.94□□□□□ -1.14
USP49-204ENST00000423567 ASB13Q8WXK3 278 aa7.94□□□□□ -1.14
USP49-204ENST00000423567 SMIM3Q9BZL3 60 aa7.94□□□□□ -1.14
USP49-204ENST00000423567 SLC35B3Q9H1N7 401 aa7.94□□□□□ -1.14
USP49-204ENST00000423567 ZNF331Q9NQX6 463 aaPredicted RBP7.94□□□□□ -1.14
USP49-204ENST00000423567 X6R8D5 127 aa7.94□□□□□ -1.14
USP49-204ENST00000423567 KMT2CQ8NEZ4 4911 aaKnown RBP7.93□□□□□ -1.14
USP49-204ENST00000423567 TRAV5A0A0B4J249 113 aa7.93□□□□□ -1.14
USP49-204ENST00000423567 LCE6AA0A183 80 aa7.93□□□□□ -1.14
USP49-204ENST00000423567 SMIM9A6NGZ8 99 aa7.93□□□□□ -1.14
USP49-204ENST00000423567 H3BTX0 84 aa7.93□□□□□ -1.14
USP49-204ENST00000423567 SNRPCP09234 159 aaKnown RBP7.93□□□□□ -1.14
USP49-204ENST00000423567 IGLC2P0DOY2 106 aa7.93□□□□□ -1.14
USP49-204ENST00000423567 NANOS2P60321 138 aaKnown RBP7.93□□□□□ -1.14
USP49-204ENST00000423567 RHOBP62745 196 aa7.93□□□□□ -1.14
USP49-204ENST00000423567 MORN5Q5VZ52 161 aa7.93□□□□□ -1.14
USP49-204ENST00000423567 CEMP1Q6PRD7 247 aaPredicted RBP7.93□□□□□ -1.14
USP49-204ENST00000423567 OR8A1Q8NGG7 326 aa7.93□□□□□ -1.14
USP49-204ENST00000423567 RPUSD4Q96CM3 377 aaKnown RBP7.93□□□□□ -1.14
USP49-204ENST00000423567 TMEM208Q9BTX3 173 aa7.93□□□□□ -1.14
USP49-204ENST00000423567 AGRNO00468 2067 aa7.92□□□□□ -1.14
USP49-204ENST00000423567 TMEM189A5PLL7 270 aa7.92□□□□□ -1.14
USP49-204ENST00000423567 ZNF253O75346 499 aa7.92□□□□□ -1.14
USP49-204ENST00000423567 INSP01308 110 aa7.92□□□□□ -1.14
USP49-204ENST00000423567 ZNF705DP0CH99 300 aaPredicted RBP7.92□□□□□ -1.14
USP49-204ENST00000423567 ZNF705BP0CI00 300 aaPredicted RBP7.92□□□□□ -1.14
USP49-204ENST00000423567 HLA-DMBP28068 263 aa7.92□□□□□ -1.14
USP49-204ENST00000423567 ZNF705AQ6ZN79 300 aaPredicted RBP7.92□□□□□ -1.14
USP49-204ENST00000423567 OR11H7Q8NGC8 314 aa7.92□□□□□ -1.14
USP49-204ENST00000423567 OR10J6PQ8NGY7 276 aa7.92□□□□□ -1.14
USP49-204ENST00000423567 PHLDA1Q8WV24 401 aaPredicted RBP7.92□□□□□ -1.14
USP49-204ENST00000423567 NEU1Q99519 415 aa7.92□□□□□ -1.14
USP49-204ENST00000423567 MRPL32Q9BYC8 188 aaKnown RBP7.92□□□□□ -1.14
USP49-204ENST00000423567 TMEM14CQ9P0S9 112 aa7.92□□□□□ -1.14
USP49-204ENST00000423567 TIMM9Q9Y5J7 89 aa7.92□□□□□ -1.14
USP49-204ENST00000423567 DNAH7Q8WXX0 4024 aa7.91□□□□□ -1.14
USP49-204ENST00000423567 SCO2A0A1W2PP80 73 aa7.91□□□□□ -1.14
USP49-204ENST00000423567 A8MTW9 85 aa7.91□□□□□ -1.14
USP49-204ENST00000423567 ZNF705FA8MVS1 300 aaPredicted RBP7.91□□□□□ -1.14
USP49-204ENST00000423567 H3BQ15 152 aa7.91□□□□□ -1.14
USP49-204ENST00000423567 BOLA2-SMG1P6H3BVE0 249 aa7.91□□□□□ -1.14
USP49-204ENST00000423567 SLC17A3O00476 420 aa7.91□□□□□ -1.14
USP49-204ENST00000423567 HBE1P02100 147 aa7.91□□□□□ -1.14
USP49-204ENST00000423567 GIPP09681 153 aaPredicted RBP7.91□□□□□ -1.14
USP49-204ENST00000423567 RBMY1A1P0DJD3 496 aaKnown RBP7.91□□□□□ -1.14
USP49-204ENST00000423567 RBMY1CP0DJD4 496 aa7.91□□□□□ -1.14
USP49-204ENST00000423567 HIST1H1EP10412 219 aaKnown RBP7.91□□□□□ -1.14
USP49-204ENST00000423567 RBMY1FQ15415 496 aaKnown RBP7.91□□□□□ -1.14
USP49-204ENST00000423567 SPINK13Q1W4C9 94 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms