RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 TM2D3Q9BRN9 247 aa7.2□□□□□ -1.26
HERC3-204ENST00000422770 MRPL32Q9BYC8 188 aaKnown RBP7.2□□□□□ -1.26
HERC3-204ENST00000422770 ACTR3CQ9C0K3 210 aaPredicted RBP7.2□□□□□ -1.26
HERC3-204ENST00000422770 MAP6D1Q9H9H5 199 aa7.2□□□□□ -1.26
HERC3-204ENST00000422770 FUT9Q9Y231 359 aa7.2□□□□□ -1.26
HERC3-204ENST00000422770 TEX46H3BTG2 121 aa7.19□□□□□ -1.26
HERC3-204ENST00000422770 RGS13O14921 159 aa7.19□□□□□ -1.26
HERC3-204ENST00000422770 ZNF688P0C7X2 276 aa7.19□□□□□ -1.26
HERC3-204ENST00000422770 APOC4P55056 127 aa7.19□□□□□ -1.26
HERC3-204ENST00000422770 FGF8P55075 233 aaPredicted RBP7.19□□□□□ -1.26
HERC3-204ENST00000422770 CMC4P56277 68 aaPredicted RBP7.19□□□□□ -1.26
HERC3-204ENST00000422770 PLP1P60201 277 aa7.19□□□□□ -1.26
HERC3-204ENST00000422770 RAB14P61106 215 aa7.19□□□□□ -1.26
HERC3-204ENST00000422770 UBE2L3P68036 154 aaKnown RBP7.19□□□□□ -1.26
HERC3-204ENST00000422770 KHDC3LQ587J8 217 aa7.19□□□□□ -1.26
HERC3-204ENST00000422770 C16orf54Q6UWD8 224 aa7.19□□□□□ -1.26
HERC3-204ENST00000422770 PATE2Q6UY27 113 aa7.19□□□□□ -1.26
HERC3-204ENST00000422770 DPPA3Q6W0C5 159 aa7.19□□□□□ -1.26
HERC3-204ENST00000422770 S100A7AQ86SG5 101 aa7.19□□□□□ -1.26
HERC3-204ENST00000422770 RPP25LQ8N5L8 163 aaKnown RBP7.19□□□□□ -1.26
HERC3-204ENST00000422770 FAM24BQ8N5W8 94 aa7.19□□□□□ -1.26
HERC3-204ENST00000422770 GATAD1Q8WUU5 269 aa7.19□□□□□ -1.26
HERC3-204ENST00000422770 RNF141Q8WVD5 230 aa7.19□□□□□ -1.26
HERC3-204ENST00000422770 TMEM37Q8WXS4 190 aa7.19□□□□□ -1.26
HERC3-204ENST00000422770 CITED4Q96RK1 184 aa7.19□□□□□ -1.26
HERC3-204ENST00000422770 SHANK2-AS3Q9BTD1 123 aa7.19□□□□□ -1.26
HERC3-204ENST00000422770 SLC25A39Q9BZJ4 359 aaPredicted RBP7.19□□□□□ -1.26
HERC3-204ENST00000422770 ELOA3CA0A087WX78 387 aaPredicted RBP7.18□□□□□ -1.26
HERC3-204ENST00000422770 TRAV5A0A0B4J249 113 aa7.18□□□□□ -1.26
HERC3-204ENST00000422770 NMBP08949 121 aa7.18□□□□□ -1.26
HERC3-204ENST00000422770 ARL14EPLP0DKL9 152 aa7.18□□□□□ -1.26
HERC3-204ENST00000422770 TAS2R45P59539 299 aa7.18□□□□□ -1.26
HERC3-204ENST00000422770 PSMG4Q5JS54 123 aa7.18□□□□□ -1.26
HERC3-204ENST00000422770 OR8I2Q8N0Y5 310 aa7.18□□□□□ -1.26
HERC3-204ENST00000422770 GLMPQ8WWB7 406 aa7.18□□□□□ -1.26
HERC3-204ENST00000422770 RAB24Q969Q5 203 aa7.18□□□□□ -1.26
HERC3-204ENST00000422770 SEPSECSQ9HD40 501 aaKnown RBP7.18□□□□□ -1.26
HERC3-204ENST00000422770 DNAJC4Q9NNZ3 241 aa7.18□□□□□ -1.26
HERC3-204ENST00000422770 K7EQG2 157 aa7.17□□□□□ -1.26
HERC3-204ENST00000422770 BUB3O43684 328 aa7.17□□□□□ -1.26
HERC3-204ENST00000422770 HBE1P02100 147 aa7.17□□□□□ -1.26
HERC3-204ENST00000422770 H2AFB1P0C5Y9 115 aa7.17□□□□□ -1.26
HERC3-204ENST00000422770 PYYP10082 97 aa7.17□□□□□ -1.26
HERC3-204ENST00000422770 S100A7P31151 101 aa7.17□□□□□ -1.26
HERC3-204ENST00000422770 SNRPD3P62318 126 aaKnown RBP7.17□□□□□ -1.26
HERC3-204ENST00000422770 BLOC1S1P78537 153 aa7.17□□□□□ -1.26
HERC3-204ENST00000422770 DEFB135Q30KP9 77 aa7.17□□□□□ -1.26
HERC3-204ENST00000422770 STHQ8IWL8 128 aa7.17□□□□□ -1.26
HERC3-204ENST00000422770 LRRC20Q8TCA0 184 aa7.17□□□□□ -1.26
HERC3-204ENST00000422770 SFT2D1Q8WV19 159 aa7.17□□□□□ -1.26
HERC3-204ENST00000422770 SLC25A2Q9BXI2 301 aa7.17□□□□□ -1.26
HERC3-204ENST00000422770 HRH4Q9H3N8 390 aa7.17□□□□□ -1.26
HERC3-204ENST00000422770 NRN1Q9NPD7 142 aa7.17□□□□□ -1.26
HERC3-204ENST00000422770 U3KQE9 123 aa7.17□□□□□ -1.26
HERC3-204ENST00000422770 TRAV2A0A0B4J234 112 aa7.16□□□□□ -1.26
HERC3-204ENST00000422770 ZNF98A6NK75 572 aa7.16□□□□□ -1.26
HERC3-204ENST00000422770 KNCNA6PVL3 124 aa7.16□□□□□ -1.26
HERC3-204ENST00000422770 H3BTX0 84 aa7.16□□□□□ -1.26
HERC3-204ENST00000422770 SNRPCP09234 159 aaKnown RBP7.16□□□□□ -1.26
HERC3-204ENST00000422770 OR10J4P0C629 311 aa7.16□□□□□ -1.26
HERC3-204ENST00000422770 ATF4P18848 351 aaPredicted RBP7.16□□□□□ -1.26
HERC3-204ENST00000422770 GCHFRP30047 84 aa7.16□□□□□ -1.26
HERC3-204ENST00000422770 GALR1P47211 349 aa7.16□□□□□ -1.26
HERC3-204ENST00000422770 ACTL10Q5JWF8 245 aa7.16□□□□□ -1.26
HERC3-204ENST00000422770 LINC00322Q6ZN03 302 aaPredicted RBP7.16□□□□□ -1.26
HERC3-204ENST00000422770 SAT2Q96F10 170 aaPredicted RBP7.16□□□□□ -1.26
HERC3-204ENST00000422770 LINC00052Q96N35 136 aa7.16□□□□□ -1.26
HERC3-204ENST00000422770 PAXXQ9BUH6 204 aa7.16□□□□□ -1.26
HERC3-204ENST00000422770 AGRNO00468 2067 aa7.15□□□□□ -1.26
HERC3-204ENST00000422770 CXorf1O96002 111 aa7.15□□□□□ -1.26
HERC3-204ENST00000422770 CA1P00915 261 aaPredicted RBP7.15□□□□□ -1.26
HERC3-204ENST00000422770 STAG3L2P0CL84 134 aa7.15□□□□□ -1.26
HERC3-204ENST00000422770 STAG3L3P0CL85 134 aa7.15□□□□□ -1.26
HERC3-204ENST00000422770 ID1P41134 155 aa7.15□□□□□ -1.26
HERC3-204ENST00000422770 UBE2G2P60604 165 aa7.15□□□□□ -1.26
HERC3-204ENST00000422770 CLLU1Q5K131 121 aa7.15□□□□□ -1.26
HERC3-204ENST00000422770 DCANP1Q8TF63 244 aa7.15□□□□□ -1.26
HERC3-204ENST00000422770 BLNKQ8WV28 456 aa7.15□□□□□ -1.26
HERC3-204ENST00000422770 FAM167A-AS1Q96KT0 104 aa7.15□□□□□ -1.26
HERC3-204ENST00000422770 GNG13Q9P2W3 67 aa7.15□□□□□ -1.26
HERC3-204ENST00000422770 SPRY2O43597 315 aa7.14□□□□□ -1.27
HERC3-204ENST00000422770 IFNA1P01562 189 aa7.14□□□□□ -1.27
HERC3-204ENST00000422770 RPL7P18124 248 aaKnown RBP7.14□□□□□ -1.27
HERC3-204ENST00000422770 COL7A1Q02388 2944 aa7.14□□□□□ -1.27
HERC3-204ENST00000422770 TOR2AQ5JU69 321 aa7.14□□□□□ -1.27
HERC3-204ENST00000422770 C1orf194Q5T5A4 169 aa7.14□□□□□ -1.27
HERC3-204ENST00000422770 PQLC2Q6ZP29 291 aa7.14□□□□□ -1.27
HERC3-204ENST00000422770 BPIFA4PQ86YQ2 179 aa7.14□□□□□ -1.27
HERC3-204ENST00000422770 ZNF503Q96F45 646 aa7.14□□□□□ -1.27
HERC3-204ENST00000422770 C16orf92Q96LL3 132 aa7.14□□□□□ -1.27
HERC3-204ENST00000422770 CSTL1Q9H114 145 aa7.14□□□□□ -1.27
HERC3-204ENST00000422770 OR51M1Q9H341 326 aa7.14□□□□□ -1.27
HERC3-204ENST00000422770 TMPRSS5Q9H3S3 457 aa7.14□□□□□ -1.27
HERC3-204ENST00000422770 RNF24Q9Y225 148 aa7.14□□□□□ -1.27
HERC3-204ENST00000422770 KIR2DL5BA0A0G2JN68 375 aa7.13□□□□□ -1.27
HERC3-204ENST00000422770 KIR2DL5BA0A0G2JPC4 375 aa7.13□□□□□ -1.27
HERC3-204ENST00000422770 UBE2CO00762 179 aa7.13□□□□□ -1.27
HERC3-204ENST00000422770 ZFAND6Q6FIF0 208 aa7.13□□□□□ -1.27
HERC3-204ENST00000422770 COMMD7Q86VX2 200 aa7.13□□□□□ -1.27
HERC3-204ENST00000422770 KIR2DL5AQ8N109 375 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms