RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 SCNM1Q9BWG6 230 aa12.45□□□□□ -0.42
CDH1-202ENST00000422392 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.44□□□□□ -0.42
CDH1-202ENST00000422392 H3BRN7 92 aa12.44□□□□□ -0.42
CDH1-202ENST00000422392 HES1Q14469 280 aa12.44□□□□□ -0.42
CDH1-202ENST00000422392 CHCHD1Q96BP2 118 aaKnown RBP12.44□□□□□ -0.42
CDH1-202ENST00000422392 NDFIP1Q9BT67 221 aa12.44□□□□□ -0.42
CDH1-202ENST00000422392 MRPS16Q9Y3D3 137 aaKnown RBP12.44□□□□□ -0.42
CDH1-202ENST00000422392 HAX1O00165 279 aa12.44□□□□□ -0.42
CDH1-202ENST00000422392 IGHV3-23P01764 117 aa12.44□□□□□ -0.42
CDH1-202ENST00000422392 PSG8Q9UQ74 426 aa12.44□□□□□ -0.42
CDH1-202ENST00000422392 AKAP6Q13023 2319 aa12.44□□□□□ -0.42
CDH1-202ENST00000422392 TMSB15BA0A087X1C1 80 aa12.43□□□□□ -0.42
CDH1-202ENST00000422392 A0A1B0GUT8 65 aa12.43□□□□□ -0.42
CDH1-202ENST00000422392 FAM231BA6NCW3 169 aa12.43□□□□□ -0.42
CDH1-202ENST00000422392 NBR2O15453 112 aa12.43□□□□□ -0.42
CDH1-202ENST00000422392 CRXO43186 299 aaPredicted RBP12.43□□□□□ -0.42
CDH1-202ENST00000422392 MUC21A0A0G2JKD1 596 aa12.42□□□□□ -0.42
CDH1-202ENST00000422392 MUC21A0A140T8X8 626 aa12.42□□□□□ -0.42
CDH1-202ENST00000422392 LIPFP07098 398 aa12.42□□□□□ -0.42
CDH1-202ENST00000422392 CDSNQ15517 529 aa12.42□□□□□ -0.42
CDH1-202ENST00000422392 MUC21Q5SSG8 566 aa12.42□□□□□ -0.42
CDH1-202ENST00000422392 C16orf54Q6UWD8 224 aa12.42□□□□□ -0.42
CDH1-202ENST00000422392 ERASQ7Z444 233 aa12.42□□□□□ -0.42
CDH1-202ENST00000422392 ZNF414Q96IQ9 312 aa12.42□□□□□ -0.42
CDH1-202ENST00000422392 MRPS12O15235 138 aaKnown RBP12.42□□□□□ -0.42
CDH1-202ENST00000422392 FOXC1Q12948 553 aa12.42□□□□□ -0.42
CDH1-202ENST00000422392 PSG3Q16557 428 aa12.42□□□□□ -0.42
CDH1-202ENST00000422392 TMEM75Q8N9X5 138 aa12.42□□□□□ -0.42
CDH1-202ENST00000422392 FAM162BQ5T6X4 162 aa12.41□□□□□ -0.42
CDH1-202ENST00000422392 CFHR4Q92496 578 aa12.41□□□□□ -0.42
CDH1-202ENST00000422392 VKORC1Q9BQB6 163 aa12.41□□□□□ -0.42
CDH1-202ENST00000422392 IGHV3OR16-8A0A075B7F1 116 aa12.41□□□□□ -0.42
CDH1-202ENST00000422392 GNG7O60262 68 aa12.41□□□□□ -0.42
CDH1-202ENST00000422392 DPM3Q9P2X0 92 aa12.41□□□□□ -0.42
CDH1-202ENST00000422392 CCL25O15444 150 aa12.4□□□□□ -0.42
CDH1-202ENST00000422392 FAM106CPP0CH98 169 aa12.4□□□□□ -0.42
CDH1-202ENST00000422392 FAM106AQ4KMX7 169 aa12.4□□□□□ -0.42
CDH1-202ENST00000422392 MPV17L2Q567V2 206 aa12.4□□□□□ -0.42
CDH1-202ENST00000422392 NEU4Q8WWR8 484 aaPredicted RBP12.4□□□□□ -0.42
CDH1-202ENST00000422392 C20orf202A1L168 122 aa12.4□□□□□ -0.42
CDH1-202ENST00000422392 NDPQ00604 133 aa12.4□□□□□ -0.42
CDH1-202ENST00000422392 IGFL4Q6B9Z1 124 aa12.4□□□□□ -0.42
CDH1-202ENST00000422392 RNF5Q99942 180 aa12.4□□□□□ -0.42
CDH1-202ENST00000422392 FANCD2OSQ96PS1 177 aa12.39□□□□□ -0.43
CDH1-202ENST00000422392 MAP1LC3CQ9BXW4 147 aa12.39□□□□□ -0.43
CDH1-202ENST00000422392 IGHV3-35A0A0C4DH35 117 aa12.39□□□□□ -0.43
CDH1-202ENST00000422392 NCBP2LA6PVI3 153 aaKnown RBP12.39□□□□□ -0.43
CDH1-202ENST00000422392 K7EQM0 130 aa12.39□□□□□ -0.43
CDH1-202ENST00000422392 DYNAPQ8N1N2 210 aa12.39□□□□□ -0.43
CDH1-202ENST00000422392 LY6G5BQ8NDX9 201 aa12.39□□□□□ -0.43
CDH1-202ENST00000422392 COL12A1Q99715 3063 aa12.39□□□□□ -0.43
CDH1-202ENST00000422392 IGKV2-40A0A087WW87 121 aaPredicted RBP12.38□□□□□ -0.43
CDH1-202ENST00000422392 LOC389332A0A1B0GUA5 103 aa12.38□□□□□ -0.43
CDH1-202ENST00000422392 WI2-2373I1.2A0A1W2PRP0 233 aa12.38□□□□□ -0.43
CDH1-202ENST00000422392 TMEM213A2RRL7 107 aa12.38□□□□□ -0.43
CDH1-202ENST00000422392 F8W735 103 aaPredicted RBP12.38□□□□□ -0.43
CDH1-202ENST00000422392 IGKV2D-40P01614 121 aaPredicted RBP12.38□□□□□ -0.43
CDH1-202ENST00000422392 PTTG1IPP53801 180 aa12.38□□□□□ -0.43
CDH1-202ENST00000422392 RIGQ13278 110 aa12.38□□□□□ -0.43
CDH1-202ENST00000422392 TMEM191AQ9H0A3 160 aa12.38□□□□□ -0.43
CDH1-202ENST00000422392 COX11Q9Y6N1 276 aa12.38□□□□□ -0.43
CDH1-202ENST00000422392 SERTM2A0A1B0GWG4 89 aa12.38□□□□□ -0.43
CDH1-202ENST00000422392 FXYD7P58549 80 aa12.38□□□□□ -0.43
CDH1-202ENST00000422392 LOXL1Q08397 574 aaPredicted RBP12.38□□□□□ -0.43
CDH1-202ENST00000422392 AP5S1Q9NUS5 200 aa12.38□□□□□ -0.43
CDH1-202ENST00000422392 C1RLQ9NZP8 487 aa12.38□□□□□ -0.43
CDH1-202ENST00000422392 OR5AL1P0C617 328 aa12.37□□□□□ -0.43
CDH1-202ENST00000422392 C5orf64Q2M2E5 130 aa12.37□□□□□ -0.43
CDH1-202ENST00000422392 ST20Q9HBF5 79 aa12.37□□□□□ -0.43
CDH1-202ENST00000422392 MAP1AP78559 2803 aaPredicted RBP12.37□□□□□ -0.43
CDH1-202ENST00000422392 TRBV6-1A0A0K0K1D8 114 aa12.37□□□□□ -0.43
CDH1-202ENST00000422392 OR2T8A6NH00 312 aa12.37□□□□□ -0.43
CDH1-202ENST00000422392 NDUFA3O95167 84 aa12.37□□□□□ -0.43
CDH1-202ENST00000422392 NCR2O95944 276 aa12.37□□□□□ -0.43
CDH1-202ENST00000422392 IFI27P40305 119 aaPredicted RBP12.37□□□□□ -0.43
CDH1-202ENST00000422392 FOXE3Q13461 319 aa12.37□□□□□ -0.43
CDH1-202ENST00000422392 LYZL1Q6UWQ5 148 aa12.37□□□□□ -0.43
CDH1-202ENST00000422392 OR11H6Q8NGC7 330 aa12.37□□□□□ -0.43
CDH1-202ENST00000422392 ORAOV1Q8WV07 137 aa12.37□□□□□ -0.43
CDH1-202ENST00000422392 NPBQ8NG41 125 aa12.36□□□□□ -0.43
CDH1-202ENST00000422392 PRSS3P2Q8NHM4 247 aa12.36□□□□□ -0.43
CDH1-202ENST00000422392 Q8TAT8 98 aa12.36□□□□□ -0.43
CDH1-202ENST00000422392 SRSF8Q9BRL6 282 aaKnown RBP12.36□□□□□ -0.43
CDH1-202ENST00000422392 IGLV11-55A0A075B6I3 123 aa12.36□□□□□ -0.43
CDH1-202ENST00000422392 K7ENP7 123 aa12.36□□□□□ -0.43
CDH1-202ENST00000422392 SNAI2O43623 268 aa12.36□□□□□ -0.43
CDH1-202ENST00000422392 NUDT3O95989 172 aa12.36□□□□□ -0.43
CDH1-202ENST00000422392 CT45A10P0DMU9 189 aa12.36□□□□□ -0.43
CDH1-202ENST00000422392 HLA-DMBP28068 263 aa12.36□□□□□ -0.43
CDH1-202ENST00000422392 LYPD1Q8N2G4 141 aa12.36□□□□□ -0.43
CDH1-202ENST00000422392 AAMDCQ9H7C9 122 aa12.36□□□□□ -0.43
CDH1-202ENST00000422392 RNF24Q9Y225 148 aa12.36□□□□□ -0.43
CDH1-202ENST00000422392 HSBP1L1C9JCN9 74 aa12.35□□□□□ -0.43
CDH1-202ENST00000422392 D6R8Y8 96 aa12.35□□□□□ -0.43
CDH1-202ENST00000422392 CCL21O00585 134 aa12.35□□□□□ -0.43
CDH1-202ENST00000422392 AMN1Q8IY45 258 aa12.35□□□□□ -0.43
CDH1-202ENST00000422392 ZNF738Q8NE65 137 aa12.35□□□□□ -0.43
CDH1-202ENST00000422392 SH2D1AO60880 128 aa12.35□□□□□ -0.43
CDH1-202ENST00000422392 MFAP4P55083 255 aa12.35□□□□□ -0.43
CDH1-202ENST00000422392 SLC25A34Q6PIV7 304 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms