RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 KIR2DL4Q99706 377 aa7.75□□□□□ -1.17
CMSS1-201ENST00000421999 ASCL2Q99929 193 aa7.75□□□□□ -1.17
CMSS1-201ENST00000421999 GPR61Q9BZJ8 451 aa7.75□□□□□ -1.17
CMSS1-201ENST00000421999 CYTL1Q9NRR1 136 aa7.75□□□□□ -1.17
CMSS1-201ENST00000421999 NACAE9PAV3 2078 aa7.75□□□□□ -1.17
CMSS1-201ENST00000421999 F8P00451 2351 aa7.75□□□□□ -1.17
CMSS1-201ENST00000421999 TRGV4A0A0C4DH28 118 aa7.75□□□□□ -1.17
CMSS1-201ENST00000421999 PHOX2AO14813 284 aa7.75□□□□□ -1.17
CMSS1-201ENST00000421999 DEFB136Q30KP8 78 aa7.75□□□□□ -1.17
CMSS1-201ENST00000421999 ZNF506Q5JVG8 444 aa7.75□□□□□ -1.17
CMSS1-201ENST00000421999 EIF4E3Q8N5X7 224 aaKnown RBP7.75□□□□□ -1.17
CMSS1-201ENST00000421999 SFRP2Q96HF1 295 aa7.75□□□□□ -1.17
CMSS1-201ENST00000421999 CENPEQ02224 2701 aa7.75□□□□□ -1.17
CMSS1-201ENST00000421999 A0A1W2PPR1 153 aa7.74□□□□□ -1.17
CMSS1-201ENST00000421999 PCP4P48539 62 aa7.74□□□□□ -1.17
CMSS1-201ENST00000421999 PTTG1IPP53801 180 aa7.74□□□□□ -1.17
CMSS1-201ENST00000421999 ZNF124Q15973 351 aa7.74□□□□□ -1.17
CMSS1-201ENST00000421999 C11orf71Q6IPW1 123 aa7.74□□□□□ -1.17
CMSS1-201ENST00000421999 H7C1H1 209 aa7.74□□□□□ -1.17
CMSS1-201ENST00000421999 LEPP41159 167 aa7.74□□□□□ -1.17
CMSS1-201ENST00000421999 FOXA3P55318 350 aaPredicted RBP7.74□□□□□ -1.17
CMSS1-201ENST00000421999 PUSL1Q8N0Z8 303 aaKnown RBP7.74□□□□□ -1.17
CMSS1-201ENST00000421999 OR10D4PQ8NGN7 298 aa7.74□□□□□ -1.17
CMSS1-201ENST00000421999 VN1R17PQ8TDU5 208 aa7.74□□□□□ -1.17
CMSS1-201ENST00000421999 FMC1Q96HJ9 113 aa7.74□□□□□ -1.17
CMSS1-201ENST00000421999 HLA-DQA1P01909 254 aa7.74□□□□□ -1.17
CMSS1-201ENST00000421999 MT-ND6P03923 174 aa7.74□□□□□ -1.17
CMSS1-201ENST00000421999 LMO4P61968 165 aa7.74□□□□□ -1.17
CMSS1-201ENST00000421999 LOXL1Q08397 574 aaPredicted RBP7.74□□□□□ -1.17
CMSS1-201ENST00000421999 RPP25LQ8N5L8 163 aaKnown RBP7.74□□□□□ -1.17
CMSS1-201ENST00000421999 PAX9P55771 341 aa7.74□□□□□ -1.17
CMSS1-201ENST00000421999 TAS2R60P59551 318 aa7.74□□□□□ -1.17
CMSS1-201ENST00000421999 TCF23Q7RTU1 214 aa7.74□□□□□ -1.17
CMSS1-201ENST00000421999 BCL6BQ8N143 479 aaPredicted RBP7.74□□□□□ -1.17
CMSS1-201ENST00000421999 Q8N7P7 452 aa7.74□□□□□ -1.17
CMSS1-201ENST00000421999 FER1L6-AS1Q8NA97 138 aa7.74□□□□□ -1.17
CMSS1-201ENST00000421999 LINC00587B1AMM8 73 aa7.73□□□□□ -1.17
CMSS1-201ENST00000421999 NUDT3O95989 172 aa7.73□□□□□ -1.17
CMSS1-201ENST00000421999 TOMM40O96008 361 aa7.73□□□□□ -1.17
CMSS1-201ENST00000421999 Q8TAT8 98 aa7.73□□□□□ -1.17
CMSS1-201ENST00000421999 MAP1LC3AQ9H492 121 aa7.73□□□□□ -1.17
CMSS1-201ENST00000421999 NRN1Q9NPD7 142 aa7.73□□□□□ -1.17
CMSS1-201ENST00000421999 SNRPEP62304 92 aaKnown RBP7.73□□□□□ -1.17
CMSS1-201ENST00000421999 REC114Q7Z4M0 266 aa7.73□□□□□ -1.17
CMSS1-201ENST00000421999 TRAV12-3A0A0B4J271 114 aa7.73□□□□□ -1.17
CMSS1-201ENST00000421999 A0A1B0GUT8 65 aa7.73□□□□□ -1.17
CMSS1-201ENST00000421999 PGPEP1LA6NFU8 196 aa7.73□□□□□ -1.17
CMSS1-201ENST00000421999 FBLL1A6NHQ2 334 aaKnown RBP7.73□□□□□ -1.17
CMSS1-201ENST00000421999 RPLP1P05386 114 aaKnown RBP7.73□□□□□ -1.17
CMSS1-201ENST00000421999 STAG3L2P0CL84 134 aa7.73□□□□□ -1.17
CMSS1-201ENST00000421999 STAG3L3P0CL85 134 aa7.73□□□□□ -1.17
CMSS1-201ENST00000421999 CGB3P0DN86 165 aa7.73□□□□□ -1.17
CMSS1-201ENST00000421999 CGB7P0DN87 165 aa7.73□□□□□ -1.17
CMSS1-201ENST00000421999 Q1RN00 199 aa7.73□□□□□ -1.17
CMSS1-201ENST00000421999 LCN12Q6JVE5 192 aa7.73□□□□□ -1.17
CMSS1-201ENST00000421999 C8orf86Q6ZUL3 223 aa7.73□□□□□ -1.17
CMSS1-201ENST00000421999 C5orf30Q96GV9 206 aa7.73□□□□□ -1.17
CMSS1-201ENST00000421999 C1QTNF4Q9BXJ3 329 aa7.73□□□□□ -1.17
CMSS1-201ENST00000421999 INAFM1C9JVW0 142 aa7.72□□□□□ -1.17
CMSS1-201ENST00000421999 SCGB1D4Q6XE38 83 aa7.72□□□□□ -1.17
CMSS1-201ENST00000421999 PACRGQ96M98 296 aaPredicted RBP7.72□□□□□ -1.17
CMSS1-201ENST00000421999 XCL2Q9UBD3 114 aa7.72□□□□□ -1.17
CMSS1-201ENST00000421999 IGLV1-47P01700 117 aa7.72□□□□□ -1.17
CMSS1-201ENST00000421999 C8orf31Q8N9H6 132 aa7.72□□□□□ -1.17
CMSS1-201ENST00000421999 ZNF502Q8TBZ5 544 aa7.72□□□□□ -1.17
CMSS1-201ENST00000421999 ZNF256Q9Y2P7 627 aaPredicted RBP7.72□□□□□ -1.17
CMSS1-201ENST00000421999 FREM2Q5SZK8 3169 aa7.72□□□□□ -1.17
CMSS1-201ENST00000421999 TRAV8-1A0A0A6YYK1 113 aa7.72□□□□□ -1.17
CMSS1-201ENST00000421999 RITA1Q96K30 269 aa7.72□□□□□ -1.17
CMSS1-201ENST00000421999 TSSC4Q9Y5U2 329 aaPredicted RBP7.72□□□□□ -1.17
CMSS1-201ENST00000421999 PROP1O75360 226 aa7.71□□□□□ -1.17
CMSS1-201ENST00000421999 IGLV2-14P01704 120 aa7.71□□□□□ -1.17
CMSS1-201ENST00000421999 SRP19P09132 144 aaKnown RBP7.71□□□□□ -1.17
CMSS1-201ENST00000421999 LYL1P12980 280 aa7.71□□□□□ -1.17
CMSS1-201ENST00000421999 HERVK_113P61574 105 aa7.71□□□□□ -1.17
CMSS1-201ENST00000421999 CCL20P78556 96 aa7.71□□□□□ -1.17
CMSS1-201ENST00000421999 LRRC75A-AS1Q8N1F1 130 aa7.71□□□□□ -1.17
CMSS1-201ENST00000421999 MAP1LC3CQ9BXW4 147 aa7.71□□□□□ -1.17
CMSS1-201ENST00000421999 RNASE7Q9H1E1 156 aaKnown RBP7.71□□□□□ -1.17
CMSS1-201ENST00000421999 ZFP30Q9Y2G7 519 aa7.71□□□□□ -1.17
CMSS1-201ENST00000421999 CCL24O00175 119 aa7.71□□□□□ -1.17
CMSS1-201ENST00000421999 TCTAP57738 103 aa7.71□□□□□ -1.17
CMSS1-201ENST00000421999 ELOBQ15370 118 aa7.71□□□□□ -1.17
CMSS1-201ENST00000421999 TMEM191AQ9H0A3 160 aa7.71□□□□□ -1.17
CMSS1-201ENST00000421999 RPP21Q9H633 154 aaKnown RBP7.71□□□□□ -1.17
CMSS1-201ENST00000421999 SRIP30626 198 aa7.71□□□□□ -1.18
CMSS1-201ENST00000421999 HBBP68871 147 aa7.71□□□□□ -1.18
CMSS1-201ENST00000421999 TRGV1A0A0A0MS02 117 aa7.71□□□□□ -1.18
CMSS1-201ENST00000421999 DEFB130BP0DP73 79 aa7.71□□□□□ -1.18
CMSS1-201ENST00000421999 DEFB130AP0DP74 79 aa7.71□□□□□ -1.18
CMSS1-201ENST00000421999 ZNF138P52744 262 aa7.71□□□□□ -1.18
CMSS1-201ENST00000421999 TMEM136Q6ZRR5 245 aa7.71□□□□□ -1.18
CMSS1-201ENST00000421999 ODF3L1Q8IXM7 274 aa7.71□□□□□ -1.18
CMSS1-201ENST00000421999 MRAPQ8TCY5 172 aa7.71□□□□□ -1.18
CMSS1-201ENST00000421999 VAMP8Q9BV40 100 aa7.71□□□□□ -1.18
CMSS1-201ENST00000421999 A0A1B0GUS0 222 aa7.7□□□□□ -1.18
CMSS1-201ENST00000421999 H3BVH4 76 aa7.7□□□□□ -1.18
CMSS1-201ENST00000421999 IL15RAQ13261 267 aa7.7□□□□□ -1.18
CMSS1-201ENST00000421999 MCRIP2Q9BUT9 160 aaKnown RBP7.7□□□□□ -1.18
CMSS1-201ENST00000421999 MRPL18Q9H0U6 180 aaKnown RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 147.3 ms