RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 CXCL2P19875 107 aa11.58□□□□□ -0.56
BRAT1-202ENST00000421712 NUTF2P61970 127 aaKnown RBP11.58□□□□□ -0.56
BRAT1-202ENST00000421712 RHOBP62745 196 aa11.58□□□□□ -0.56
BRAT1-202ENST00000421712 GUK1Q16774 197 aa11.58□□□□□ -0.56
BRAT1-202ENST00000421712 GDF5OSQ5U4N7 250 aa11.58□□□□□ -0.56
BRAT1-202ENST00000421712 MORN3Q6PF18 240 aaPredicted RBP11.58□□□□□ -0.56
BRAT1-202ENST00000421712 FOXI2Q6ZQN5 318 aa11.58□□□□□ -0.56
BRAT1-202ENST00000421712 SLC50A1Q9BRV3 221 aa11.58□□□□□ -0.56
BRAT1-202ENST00000421712 SAV1Q9H4B6 383 aaPredicted RBP11.58□□□□□ -0.56
BRAT1-202ENST00000421712 FUT9Q9Y231 359 aa11.58□□□□□ -0.56
BRAT1-202ENST00000421712 TIMM9Q9Y5J7 89 aa11.58□□□□□ -0.56
BRAT1-202ENST00000421712 H3BQ15 152 aa11.57□□□□□ -0.56
BRAT1-202ENST00000421712 TAAR5O14804 337 aa11.57□□□□□ -0.56
BRAT1-202ENST00000421712 IGLC2P0DOY2 106 aa11.57□□□□□ -0.56
BRAT1-202ENST00000421712 PYYP10082 97 aa11.57□□□□□ -0.56
BRAT1-202ENST00000421712 HLA-DRB4P13762 266 aa11.57□□□□□ -0.56
BRAT1-202ENST00000421712 ATP6V0CP27449 155 aa11.57□□□□□ -0.56
BRAT1-202ENST00000421712 HLA-DMBP28068 263 aa11.57□□□□□ -0.56
BRAT1-202ENST00000421712 RPL7L1Q6DKI1 246 aaKnown RBP11.57□□□□□ -0.56
BRAT1-202ENST00000421712 BLNKQ8WV28 456 aa11.57□□□□□ -0.56
BRAT1-202ENST00000421712 SLC25A2Q9BXI2 301 aa11.57□□□□□ -0.56
BRAT1-202ENST00000421712 ZNF586Q9NXT0 402 aa11.57□□□□□ -0.56
BRAT1-202ENST00000421712 TMEM14CQ9P0S9 112 aa11.57□□□□□ -0.56
BRAT1-202ENST00000421712 HLA-DRB4X5D2U9 266 aa11.57□□□□□ -0.56
BRAT1-202ENST00000421712 OR7C2O60412 319 aa11.56□□□□□ -0.56
BRAT1-202ENST00000421712 HIST1H1EP10412 219 aaKnown RBP11.56□□□□□ -0.56
BRAT1-202ENST00000421712 M6PRP20645 277 aa11.56□□□□□ -0.56
BRAT1-202ENST00000421712 TAS2R45P59539 299 aa11.56□□□□□ -0.56
BRAT1-202ENST00000421712 COL7A1Q02388 2944 aa11.56□□□□□ -0.56
BRAT1-202ENST00000421712 PSG3Q16557 428 aa11.56□□□□□ -0.56
BRAT1-202ENST00000421712 WWC2-AS2Q96NR7 200 aa11.56□□□□□ -0.56
BRAT1-202ENST00000421712 OVOL2Q9BRP0 275 aa11.56□□□□□ -0.56
BRAT1-202ENST00000421712 PAXXQ9BUH6 204 aa11.56□□□□□ -0.56
BRAT1-202ENST00000421712 OR51M1Q9H341 326 aa11.56□□□□□ -0.56
BRAT1-202ENST00000421712 ZNF331Q9NQX6 463 aaPredicted RBP11.56□□□□□ -0.56
BRAT1-202ENST00000421712 SLC17A3O00476 420 aa11.55□□□□□ -0.56
BRAT1-202ENST00000421712 JTBO76095 146 aa11.55□□□□□ -0.56
BRAT1-202ENST00000421712 FXYD7P58549 80 aa11.55□□□□□ -0.56
BRAT1-202ENST00000421712 FAM122CQ6P4D5 195 aa11.55□□□□□ -0.56
BRAT1-202ENST00000421712 OR11H4Q8NGC9 324 aa11.55□□□□□ -0.56
BRAT1-202ENST00000421712 OR10G4Q8NGN3 311 aa11.55□□□□□ -0.56
BRAT1-202ENST00000421712 OR10G9Q8NGN4 311 aa11.55□□□□□ -0.56
BRAT1-202ENST00000421712 OR10G7Q8NGN6 311 aa11.55□□□□□ -0.56
BRAT1-202ENST00000421712 RNF183Q96D59 192 aa11.55□□□□□ -0.56
BRAT1-202ENST00000421712 GNPNAT1Q96EK6 184 aaPredicted RBP11.55□□□□□ -0.56
BRAT1-202ENST00000421712 PSMG3Q9BT73 122 aaPredicted RBP11.55□□□□□ -0.56
BRAT1-202ENST00000421712 TP53TG1Q9Y2A0 90 aa11.55□□□□□ -0.56
BRAT1-202ENST00000421712 HUWE1Q7Z6Z7 4374 aaKnown RBP11.54□□□□□ -0.56
BRAT1-202ENST00000421712 A0A0J9YX75 114 aa11.54□□□□□ -0.56
BRAT1-202ENST00000421712 HMSDA8MTL9 139 aa11.54□□□□□ -0.56
BRAT1-202ENST00000421712 DUSP14O95147 198 aaKnown RBP11.54□□□□□ -0.56
BRAT1-202ENST00000421712 OR10J4P0C629 311 aa11.54□□□□□ -0.56
BRAT1-202ENST00000421712 ZNF705DP0CH99 300 aaPredicted RBP11.54□□□□□ -0.56
BRAT1-202ENST00000421712 ZNF705BP0CI00 300 aaPredicted RBP11.54□□□□□ -0.56
BRAT1-202ENST00000421712 PRB4P10163 310 aaPredicted RBP11.54□□□□□ -0.56
BRAT1-202ENST00000421712 RAB2AP61019 212 aa11.54□□□□□ -0.56
BRAT1-202ENST00000421712 SERF2P84101 59 aa11.54□□□□□ -0.56
BRAT1-202ENST00000421712 KHDC3LQ587J8 217 aa11.54□□□□□ -0.56
BRAT1-202ENST00000421712 TMEM41BQ5BJD5 291 aa11.54□□□□□ -0.56
BRAT1-202ENST00000421712 RNF141Q8WVD5 230 aa11.54□□□□□ -0.56
BRAT1-202ENST00000421712 RPUSD4Q96CM3 377 aaKnown RBP11.54□□□□□ -0.56
BRAT1-202ENST00000421712 SAT2Q96F10 170 aaPredicted RBP11.54□□□□□ -0.56
BRAT1-202ENST00000421712 ST6GAL2Q96JF0 529 aa11.54□□□□□ -0.56
BRAT1-202ENST00000421712 FAM167A-AS1Q96KT0 104 aa11.54□□□□□ -0.56
BRAT1-202ENST00000421712 ARPC5LQ9BPX5 153 aa11.54□□□□□ -0.56
BRAT1-202ENST00000421712 SH3BGRL3Q9H299 93 aa11.54□□□□□ -0.56
BRAT1-202ENST00000421712 PPP1R14DQ9NXH3 145 aa11.54□□□□□ -0.56
BRAT1-202ENST00000421712 CLEC5AQ9NY25 188 aa11.54□□□□□ -0.56
BRAT1-202ENST00000421712 XCL2Q9UBD3 114 aa11.54□□□□□ -0.56
BRAT1-202ENST00000421712 TRBV19A0A075B6N1 114 aa11.53□□□□□ -0.56
BRAT1-202ENST00000421712 A0A0D9SG52 128 aa11.53□□□□□ -0.56
BRAT1-202ENST00000421712 ZNF705FA8MVS1 300 aaPredicted RBP11.53□□□□□ -0.56
BRAT1-202ENST00000421712 EIF3GO75821 320 aaKnown RBP eCLIP11.53□□□□□ -0.56
BRAT1-202ENST00000421712 MBP02144 154 aa11.53□□□□□ -0.56
BRAT1-202ENST00000421712 NBEAP1P0C6P0 100 aa11.53□□□□□ -0.56
BRAT1-202ENST00000421712 C4BPBP20851 252 aa11.53□□□□□ -0.56
BRAT1-202ENST00000421712 PSG9Q00887 426 aa11.53□□□□□ -0.56
BRAT1-202ENST00000421712 HIST1H1AQ02539 215 aaPredicted RBP11.53□□□□□ -0.56
BRAT1-202ENST00000421712 KCNRGQ8N5I3 272 aa11.53□□□□□ -0.56
BRAT1-202ENST00000421712 OR2G3Q8NGZ4 309 aa11.53□□□□□ -0.56
BRAT1-202ENST00000421712 OR11H2Q8NH07 326 aa11.53□□□□□ -0.56
BRAT1-202ENST00000421712 RARRES2Q99969 163 aa11.53□□□□□ -0.56
BRAT1-202ENST00000421712 C1QTNF4Q9BXJ3 329 aa11.53□□□□□ -0.56
BRAT1-202ENST00000421712 AAMDCQ9H7C9 122 aa11.53□□□□□ -0.56
BRAT1-202ENST00000421712 NBEAL2Q6ZNJ1 2754 aa11.53□□□□□ -0.56
BRAT1-202ENST00000421712 KANTRA0A1W2PQU2 76 aa11.52□□□□□ -0.57
BRAT1-202ENST00000421712 HMGB3O15347 200 aaKnown RBP11.52□□□□□ -0.57
BRAT1-202ENST00000421712 ZNF253O75346 499 aa11.52□□□□□ -0.57
BRAT1-202ENST00000421712 CNN1P51911 297 aaKnown RBP11.52□□□□□ -0.57
BRAT1-202ENST00000421712 UBE2L3P68036 154 aaKnown RBP11.52□□□□□ -0.57
BRAT1-202ENST00000421712 ZNF345Q14585 488 aa11.52□□□□□ -0.57
BRAT1-202ENST00000421712 OR8A1Q8NGG7 326 aa11.52□□□□□ -0.57
BRAT1-202ENST00000421712 PFDN1O60925 122 aa11.51□□□□□ -0.57
BRAT1-202ENST00000421712 GIG44P09565 113 aaPredicted RBP11.51□□□□□ -0.57
BRAT1-202ENST00000421712 CDC34P49427 236 aaPredicted RBP11.51□□□□□ -0.57
BRAT1-202ENST00000421712 PDE6HQ13956 83 aa11.51□□□□□ -0.57
BRAT1-202ENST00000421712 AKAP14Q86UN6 197 aa11.51□□□□□ -0.57
BRAT1-202ENST00000421712 TCTE3Q8IZS6 198 aa11.51□□□□□ -0.57
BRAT1-202ENST00000421712 EXOC3-AS1Q8N2X6 119 aa11.51□□□□□ -0.57
BRAT1-202ENST00000421712 OR10J6PQ8NGY7 276 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms