RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 FOSL1P15407 271 aa16.15■□□□□ 0.18
GPC1-202ENST00000420138 MEOX2P50222 304 aa16.15■□□□□ 0.18
GPC1-202ENST00000420138 Q8N2B8 174 aa16.15■□□□□ 0.18
GPC1-202ENST00000420138 TMEM86BQ8N661 226 aa16.15■□□□□ 0.18
GPC1-202ENST00000420138 TCEAL7Q9BRU2 100 aa16.15■□□□□ 0.18
GPC1-202ENST00000420138 TRBV19A0A075B6N1 114 aa16.15■□□□□ 0.18
GPC1-202ENST00000420138 IGHV3-11P01762 117 aa16.15■□□□□ 0.18
GPC1-202ENST00000420138 S100A7AQ86SG5 101 aa16.15■□□□□ 0.18
GPC1-202ENST00000420138 C12orf57Q99622 126 aa16.15■□□□□ 0.18
GPC1-202ENST00000420138 PGPA6NDG6 321 aa16.14■□□□□ 0.17
GPC1-202ENST00000420138 ARL3P36405 182 aa16.14■□□□□ 0.17
GPC1-202ENST00000420138 CDX1P47902 265 aaPredicted RBP16.14■□□□□ 0.17
GPC1-202ENST00000420138 RELQ04864 619 aaPredicted RBP16.14■□□□□ 0.17
GPC1-202ENST00000420138 Q9H3A6 140 aa16.14■□□□□ 0.17
GPC1-202ENST00000420138 TMEM89A2RUT3 159 aa16.13■□□□□ 0.17
GPC1-202ENST00000420138 OR4F17Q8NGA8 305 aa16.13■□□□□ 0.17
GPC1-202ENST00000420138 LINC00479Q96M42 142 aa16.13■□□□□ 0.17
GPC1-202ENST00000420138 CDC42EP3Q9UKI2 254 aa16.13■□□□□ 0.17
GPC1-202ENST00000420138 A0A0G2JLM5 398 aa16.12■□□□□ 0.17
GPC1-202ENST00000420138 SRD5A1P18405 259 aa16.12■□□□□ 0.17
GPC1-202ENST00000420138 TAS2R60P59551 318 aa16.12■□□□□ 0.17
GPC1-202ENST00000420138 RPL15P61313 204 aaKnown RBP16.12■□□□□ 0.17
GPC1-202ENST00000420138 GNG5P63218 68 aa16.12■□□□□ 0.17
GPC1-202ENST00000420138 Q71RC1 249 aaPredicted RBP16.12■□□□□ 0.17
GPC1-202ENST00000420138 OR4X2Q8NGF9 303 aa16.12■□□□□ 0.17
GPC1-202ENST00000420138 EPDR1Q9UM22 224 aa16.12■□□□□ 0.17
GPC1-202ENST00000420138 SMAD5-AS1Q9Y6J3 95 aa16.12■□□□□ 0.17
GPC1-202ENST00000420138 PEX7O00628 323 aa16.12■□□□□ 0.17
GPC1-202ENST00000420138 BUB3O43684 328 aa16.12■□□□□ 0.17
GPC1-202ENST00000420138 S100A9P06702 114 aaKnown RBP16.12■□□□□ 0.17
GPC1-202ENST00000420138 IL36BQ9NZH7 164 aa16.12■□□□□ 0.17
GPC1-202ENST00000420138 ZNF320A2RRD8 509 aa16.11■□□□□ 0.17
GPC1-202ENST00000420138 SLC17A3O00476 420 aa16.11■□□□□ 0.17
GPC1-202ENST00000420138 SIGLEC15Q6ZMC9 328 aa16.11■□□□□ 0.17
GPC1-202ENST00000420138 IGF2BP2-AS1Q96M15 143 aa16.11■□□□□ 0.17
GPC1-202ENST00000420138 ESM1Q9NQ30 184 aa16.11■□□□□ 0.17
GPC1-202ENST00000420138 SERTAD4Q9NUC0 356 aa16.11■□□□□ 0.17
GPC1-202ENST00000420138 RNF24Q9Y225 148 aa16.11■□□□□ 0.17
GPC1-202ENST00000420138 DNAJC9-AS1A6NH13 148 aa16.1■□□□□ 0.17
GPC1-202ENST00000420138 GCGP01275 180 aa16.1■□□□□ 0.17
GPC1-202ENST00000420138 APOHP02749 345 aaPredicted RBP16.1■□□□□ 0.17
GPC1-202ENST00000420138 SMIM6P0DI80 62 aa16.1■□□□□ 0.17
GPC1-202ENST00000420138 CNN1P51911 297 aaKnown RBP16.1■□□□□ 0.17
GPC1-202ENST00000420138 ERVFC1-1P60608 527 aa16.1■□□□□ 0.17
GPC1-202ENST00000420138 ACTL10Q5JWF8 245 aa16.1■□□□□ 0.17
GPC1-202ENST00000420138 EXOC3-AS1Q8N2X6 119 aa16.1■□□□□ 0.17
GPC1-202ENST00000420138 OTORQ9NRC9 128 aa16.1■□□□□ 0.17
GPC1-202ENST00000420138 U3KQE9 123 aa16.1■□□□□ 0.17
GPC1-202ENST00000420138 TRAV9-1A0A075B6T8 112 aa16.1■□□□□ 0.17
GPC1-202ENST00000420138 IGLV2-8P01709 118 aa16.1■□□□□ 0.17
GPC1-202ENST00000420138 SLC25A5P05141 298 aaKnown RBP16.1■□□□□ 0.17
GPC1-202ENST00000420138 OR5I1Q13606 314 aa16.1■□□□□ 0.17
GPC1-202ENST00000420138 UNQ9165/PRO28630Q6UXU0 137 aa16.1■□□□□ 0.17
GPC1-202ENST00000420138 C5orf17Q8NAS9 161 aa16.1■□□□□ 0.17
GPC1-202ENST00000420138 MYOZ3Q8TDC0 251 aa16.1■□□□□ 0.17
GPC1-202ENST00000420138 HIVEP2P31629 2446 aa16.1■□□□□ 0.17
GPC1-202ENST00000420138 RPL7P18124 248 aaKnown RBP16.09■□□□□ 0.17
GPC1-202ENST00000420138 OSTCQ9NRP0 149 aa16.09■□□□□ 0.17
GPC1-202ENST00000420138 NDUFA4O00483 81 aa16.08■□□□□ 0.17
GPC1-202ENST00000420138 RPLP1P05386 114 aaKnown RBP16.08■□□□□ 0.17
GPC1-202ENST00000420138 OR8I2Q8N0Y5 310 aa16.08■□□□□ 0.17
GPC1-202ENST00000420138 LYPD1Q8N2G4 141 aa16.08■□□□□ 0.17
GPC1-202ENST00000420138 KLF12Q9Y4X4 402 aa16.08■□□□□ 0.17
GPC1-202ENST00000420138 V9GYV3 84 aa16.08■□□□□ 0.17
GPC1-202ENST00000420138 TRAV34A0A0B4J273 112 aa16.08■□□□□ 0.16
GPC1-202ENST00000420138 ISLRO14498 428 aa16.08■□□□□ 0.16
GPC1-202ENST00000420138 ZNF207O43670 478 aaKnown RBP16.08■□□□□ 0.16
GPC1-202ENST00000420138 TCRAP04437 139 aa16.08■□□□□ 0.16
GPC1-202ENST00000420138 FOXE3Q13461 319 aa16.08■□□□□ 0.16
GPC1-202ENST00000420138 PDE6HQ13956 83 aa16.08■□□□□ 0.16
GPC1-202ENST00000420138 RNF152Q8N8N0 203 aa16.08■□□□□ 0.16
GPC1-202ENST00000420138 IFITM10A6NMD0 228 aa16.07■□□□□ 0.16
GPC1-202ENST00000420138 RPEL1Q2QD12 228 aa16.07■□□□□ 0.16
GPC1-202ENST00000420138 METTL26Q96S19 204 aa16.07■□□□□ 0.16
GPC1-202ENST00000420138 ATG101Q9BSB4 218 aa16.07■□□□□ 0.16
GPC1-202ENST00000420138 FAM181BA6NEQ2 426 aa16.06■□□□□ 0.16
GPC1-202ENST00000420138 INAFM1C9JVW0 142 aa16.06■□□□□ 0.16
GPC1-202ENST00000420138 ELANEP08246 267 aa16.06■□□□□ 0.16
GPC1-202ENST00000420138 S100A7P31151 101 aa16.06■□□□□ 0.16
GPC1-202ENST00000420138 SLC35B1P78383 322 aa16.06■□□□□ 0.16
GPC1-202ENST00000420138 TMEM183BQ1AE95 376 aa16.06■□□□□ 0.16
GPC1-202ENST00000420138 FAM209BQ5JX69 171 aa16.06■□□□□ 0.16
GPC1-202ENST00000420138 HIST3H2BBQ8N257 126 aa16.06■□□□□ 0.16
GPC1-202ENST00000420138 PEF1Q9UBV8 284 aaKnown RBP16.06■□□□□ 0.16
GPC1-202ENST00000420138 HIVEP1P15822 2718 aa16.06■□□□□ 0.16
GPC1-202ENST00000420138 IGHV3-66A0A0C4DH42 116 aa16.05■□□□□ 0.16
GPC1-202ENST00000420138 MGST1P10620 155 aaKnown RBP16.05■□□□□ 0.16
GPC1-202ENST00000420138 S100A2P29034 98 aa16.05■□□□□ 0.16
GPC1-202ENST00000420138 C1orf194Q5T5A4 169 aa16.05■□□□□ 0.16
GPC1-202ENST00000420138 GFI1BQ5VTD9 330 aa16.05■□□□□ 0.16
GPC1-202ENST00000420138 ZNF418Q8TF45 676 aaPredicted RBP16.05■□□□□ 0.16
GPC1-202ENST00000420138 TRAPPC1Q9Y5R8 145 aa16.05■□□□□ 0.16
GPC1-202ENST00000420138 CUBNO60494 3623 aa16.05■□□□□ 0.16
GPC1-202ENST00000420138 SETXQ7Z333 2677 aaKnown RBP16.05■□□□□ 0.16
GPC1-202ENST00000420138 IGHV3OR16-13A0A075B7E8 117 aa16.05■□□□□ 0.16
GPC1-202ENST00000420138 IGHV3-49A0A0A0MS15 119 aa16.05■□□□□ 0.16
GPC1-202ENST00000420138 IGHV3-74A0A0B4J1X5 117 aa16.05■□□□□ 0.16
GPC1-202ENST00000420138 Q6ZSV7 163 aa16.05■□□□□ 0.16
GPC1-202ENST00000420138 RNASE7Q9H1E1 156 aaKnown RBP16.05■□□□□ 0.16
GPC1-202ENST00000420138 RPH3ALQ9UNE2 315 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms