RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 NDUFB4O95168 129 aa10.83□□□□□ -0.68
SHMT1P1-201ENST00000419974 OR10J4P0C629 311 aa10.83□□□□□ -0.68
SHMT1P1-201ENST00000419974 CBLN1P23435 193 aa10.83□□□□□ -0.68
SHMT1P1-201ENST00000419974 SRSF3P84103 164 aaKnown RBP10.83□□□□□ -0.68
SHMT1P1-201ENST00000419974 PSG9Q00887 426 aa10.83□□□□□ -0.68
SHMT1P1-201ENST00000419974 HAGHQ16775 308 aa10.83□□□□□ -0.68
SHMT1P1-201ENST00000419974 TM4SF20Q53R12 229 aa10.83□□□□□ -0.68
SHMT1P1-201ENST00000419974 KHDC1LQ5JSQ8 128 aa10.83□□□□□ -0.68
SHMT1P1-201ENST00000419974 FAM90A2PQ658T7 463 aa10.83□□□□□ -0.68
SHMT1P1-201ENST00000419974 C17orf77Q96MU5 243 aa10.83□□□□□ -0.68
SHMT1P1-201ENST00000419974 RHPN1-AS1Q9BWJ2 59 aa10.83□□□□□ -0.68
SHMT1P1-201ENST00000419974 OTORQ9NRC9 128 aa10.83□□□□□ -0.68
SHMT1P1-201ENST00000419974 YTHDF2Q9Y5A9 579 aaKnown RBP10.83□□□□□ -0.68
SHMT1P1-201ENST00000419974 C9JQL5 133 aa10.82□□□□□ -0.68
SHMT1P1-201ENST00000419974 C11orf94C9JXX5 98 aa10.82□□□□□ -0.68
SHMT1P1-201ENST00000419974 SRP19P09132 144 aaKnown RBP10.82□□□□□ -0.68
SHMT1P1-201ENST00000419974 DEFB136Q30KP8 78 aa10.82□□□□□ -0.68
SHMT1P1-201ENST00000419974 SIGLEC15Q6ZMC9 328 aa10.82□□□□□ -0.68
SHMT1P1-201ENST00000419974 DLX4Q92988 240 aaPredicted RBP10.82□□□□□ -0.68
SHMT1P1-201ENST00000419974 RPUSD4Q96CM3 377 aaKnown RBP10.82□□□□□ -0.68
SHMT1P1-201ENST00000419974 SEC11CQ9BY50 192 aa10.82□□□□□ -0.68
SHMT1P1-201ENST00000419974 IGHV3OR16-8A0A075B7F1 116 aa10.81□□□□□ -0.68
SHMT1P1-201ENST00000419974 GGTLC3B5MD39 225 aa10.81□□□□□ -0.68
SHMT1P1-201ENST00000419974 FOLR2P14207 255 aa10.81□□□□□ -0.68
SHMT1P1-201ENST00000419974 S100A1P23297 94 aa10.81□□□□□ -0.68
SHMT1P1-201ENST00000419974 SLURP1P55000 103 aa10.81□□□□□ -0.68
SHMT1P1-201ENST00000419974 SHISA2Q6UWI4 295 aa10.81□□□□□ -0.68
SHMT1P1-201ENST00000419974 IQCF2Q8IXL9 164 aa10.81□□□□□ -0.68
SHMT1P1-201ENST00000419974 HIST1H2BAQ96A08 127 aa10.81□□□□□ -0.68
SHMT1P1-201ENST00000419974 MRPL53Q96EL3 112 aaKnown RBP10.81□□□□□ -0.68
SHMT1P1-201ENST00000419974 SLC50A1Q9BRV3 221 aa10.81□□□□□ -0.68
SHMT1P1-201ENST00000419974 TRAV2A0A0B4J234 112 aa10.8□□□□□ -0.68
SHMT1P1-201ENST00000419974 ZNF785A8K8V0 405 aa10.8□□□□□ -0.68
SHMT1P1-201ENST00000419974 ZNF207O43670 478 aaKnown RBP10.8□□□□□ -0.68
SHMT1P1-201ENST00000419974 ATF4P18848 351 aaPredicted RBP10.8□□□□□ -0.68
SHMT1P1-201ENST00000419974 FAM74A3Q4VXF1 159 aa10.8□□□□□ -0.68
SHMT1P1-201ENST00000419974 CST9LP1Q5W188 147 aa10.8□□□□□ -0.68
SHMT1P1-201ENST00000419974 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.8□□□□□ -0.68
SHMT1P1-201ENST00000419974 C11orf44Q8N8P7 122 aa10.8□□□□□ -0.68
SHMT1P1-201ENST00000419974 C5orf17Q8NAS9 161 aa10.8□□□□□ -0.68
SHMT1P1-201ENST00000419974 RXFP4Q8TDU9 374 aa10.8□□□□□ -0.68
SHMT1P1-201ENST00000419974 CITED4Q96RK1 184 aa10.8□□□□□ -0.68
SHMT1P1-201ENST00000419974 TREM1Q9NP99 234 aa10.8□□□□□ -0.68
SHMT1P1-201ENST00000419974 ZNF331Q9NQX6 463 aaPredicted RBP10.8□□□□□ -0.68
SHMT1P1-201ENST00000419974 PRELID1Q9Y255 219 aa10.8□□□□□ -0.68
SHMT1P1-201ENST00000419974 SERTM2A0A1B0GWG4 89 aa10.79□□□□□ -0.68
SHMT1P1-201ENST00000419974 M0QZ24 198 aa10.79□□□□□ -0.68
SHMT1P1-201ENST00000419974 SOCS3O14543 225 aa10.79□□□□□ -0.68
SHMT1P1-201ENST00000419974 ATP6V1G1O75348 118 aa10.79□□□□□ -0.68
SHMT1P1-201ENST00000419974 CSN3P07498 182 aa10.79□□□□□ -0.68
SHMT1P1-201ENST00000419974 ATP5G3P48201 142 aa10.79□□□□□ -0.68
SHMT1P1-201ENST00000419974 UBE2G2P60604 165 aa10.79□□□□□ -0.68
SHMT1P1-201ENST00000419974 RANP62826 216 aaKnown RBP10.79□□□□□ -0.68
SHMT1P1-201ENST00000419974 SUMO1P63165 101 aaKnown RBP10.79□□□□□ -0.68
SHMT1P1-201ENST00000419974 ADAMTSL5Q6ZMM2 481 aa10.79□□□□□ -0.68
SHMT1P1-201ENST00000419974 Q9H3A6 140 aa10.79□□□□□ -0.68
SHMT1P1-201ENST00000419974 NRN1Q9NPD7 142 aa10.79□□□□□ -0.68
SHMT1P1-201ENST00000419974 MLXQ9UH92 298 aa10.79□□□□□ -0.68
SHMT1P1-201ENST00000419974 CARHSP1Q9Y2V2 147 aaKnown RBP10.79□□□□□ -0.68
SHMT1P1-201ENST00000419974 TRAV25A0A0B4J276 109 aa10.78□□□□□ -0.68
SHMT1P1-201ENST00000419974 OVOL1O14753 267 aa10.78□□□□□ -0.68
SHMT1P1-201ENST00000419974 SFTA3P0C7M3 94 aa10.78□□□□□ -0.68
SHMT1P1-201ENST00000419974 AAMDCQ9H7C9 122 aa10.78□□□□□ -0.68
SHMT1P1-201ENST00000419974 EPDR1Q9UM22 224 aa10.78□□□□□ -0.68
SHMT1P1-201ENST00000419974 KLF12Q9Y4X4 402 aa10.78□□□□□ -0.68
SHMT1P1-201ENST00000419974 TRRAPQ9Y4A5 3859 aa10.77□□□□□ -0.69
SHMT1P1-201ENST00000419974 TRBV6-1A0A0K0K1D8 114 aa10.77□□□□□ -0.69
SHMT1P1-201ENST00000419974 PGPA6NDG6 321 aa10.77□□□□□ -0.69
SHMT1P1-201ENST00000419974 FBLL1A6NHQ2 334 aaKnown RBP10.77□□□□□ -0.69
SHMT1P1-201ENST00000419974 S100A9P06702 114 aaKnown RBP10.77□□□□□ -0.69
SHMT1P1-201ENST00000419974 SOHLH1Q5JUK2 328 aa10.77□□□□□ -0.69
SHMT1P1-201ENST00000419974 PRR31Q5SQ13 230 aa10.77□□□□□ -0.69
SHMT1P1-201ENST00000419974 CYB561D1Q8N8Q1 229 aa10.77□□□□□ -0.69
SHMT1P1-201ENST00000419974 C2CD4CQ8TF44 421 aa10.77□□□□□ -0.69
SHMT1P1-201ENST00000419974 BLNKQ8WV28 456 aa10.77□□□□□ -0.69
SHMT1P1-201ENST00000419974 MGAM2Q2M2H8 2515 aa10.77□□□□□ -0.69
SHMT1P1-201ENST00000419974 A0A1W2PRX2 142 aa10.76□□□□□ -0.69
SHMT1P1-201ENST00000419974 SLC17A3O00476 420 aa10.76□□□□□ -0.69
SHMT1P1-201ENST00000419974 ISLRO14498 428 aa10.76□□□□□ -0.69
SHMT1P1-201ENST00000419974 TSPAN4O14817 238 aa10.76□□□□□ -0.69
SHMT1P1-201ENST00000419974 ADCYAP1P18509 176 aa10.76□□□□□ -0.69
SHMT1P1-201ENST00000419974 TCF24Q7RTU0 167 aa10.76□□□□□ -0.69
SHMT1P1-201ENST00000419974 LINC00482Q8N8I6 264 aa10.76□□□□□ -0.69
SHMT1P1-201ENST00000419974 OR2K2Q8NGT1 345 aa10.76□□□□□ -0.69
SHMT1P1-201ENST00000419974 DCANP1Q8TF63 244 aa10.76□□□□□ -0.69
SHMT1P1-201ENST00000419974 SMIM12Q96EX1 92 aa10.76□□□□□ -0.69
SHMT1P1-201ENST00000419974 DUX3Q96PT4 197 aa10.76□□□□□ -0.69
SHMT1P1-201ENST00000419974 ATG101Q9BSB4 218 aa10.76□□□□□ -0.69
SHMT1P1-201ENST00000419974 LY96Q9Y6Y9 160 aa10.76□□□□□ -0.69
SHMT1P1-201ENST00000419974 PKD1L1Q8TDX9 2849 aa10.75□□□□□ -0.69
SHMT1P1-201ENST00000419974 IGHV3-49A0A0A0MS15 119 aa10.75□□□□□ -0.69
SHMT1P1-201ENST00000419974 TRAV8-2A0A0B4J237 113 aa10.75□□□□□ -0.69
SHMT1P1-201ENST00000419974 IGHV3-66A0A0C4DH42 116 aa10.75□□□□□ -0.69
SHMT1P1-201ENST00000419974 RBAKDNA6NC62 111 aa10.75□□□□□ -0.69
SHMT1P1-201ENST00000419974 C9JCJ5 164 aa10.75□□□□□ -0.69
SHMT1P1-201ENST00000419974 TCRAP04437 139 aa10.75□□□□□ -0.69
SHMT1P1-201ENST00000419974 TAS2R60P59551 318 aa10.75□□□□□ -0.69
SHMT1P1-201ENST00000419974 DEFB114Q30KQ6 69 aa10.75□□□□□ -0.69
SHMT1P1-201ENST00000419974 NSUN5P1Q3KNT7 163 aa10.75□□□□□ -0.69
SHMT1P1-201ENST00000419974 PPP1R14DQ9NXH3 145 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms