RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 ENKURQ8TC29 256 aa5.06□□□□□ -1.6
HMGN1-205ENST00000419378 RAB40CQ96S21 281 aa5.06□□□□□ -1.6
HMGN1-205ENST00000419378 CSTL1Q9H114 145 aa5.06□□□□□ -1.6
HMGN1-205ENST00000419378 NRN1Q9NPD7 142 aa5.06□□□□□ -1.6
HMGN1-205ENST00000419378 BATF3Q9NR55 127 aa5.06□□□□□ -1.6
HMGN1-205ENST00000419378 C7orf66A4D0T2 115 aa5.05□□□□□ -1.6
HMGN1-205ENST00000419378 C5orf51A6NDU8 294 aa5.05□□□□□ -1.6
HMGN1-205ENST00000419378 KNCNA6PVL3 124 aa5.05□□□□□ -1.6
HMGN1-205ENST00000419378 K7EPK0 472 aa5.05□□□□□ -1.6
HMGN1-205ENST00000419378 L7N2F9 121 aa5.05□□□□□ -1.6
HMGN1-205ENST00000419378 CA1P00915 261 aaPredicted RBP5.05□□□□□ -1.6
HMGN1-205ENST00000419378 GATA2P23769 480 aaPredicted RBP5.05□□□□□ -1.6
HMGN1-205ENST00000419378 RRAS2P62070 204 aaPredicted RBP5.05□□□□□ -1.6
HMGN1-205ENST00000419378 SNRPD3P62318 126 aaKnown RBP5.05□□□□□ -1.6
HMGN1-205ENST00000419378 DLK1P80370 383 aa5.05□□□□□ -1.6
HMGN1-205ENST00000419378 PSMG4Q5JS54 123 aa5.05□□□□□ -1.6
HMGN1-205ENST00000419378 ACTL10Q5JWF8 245 aa5.05□□□□□ -1.6
HMGN1-205ENST00000419378 C1orf194Q5T5A4 169 aa5.05□□□□□ -1.6
HMGN1-205ENST00000419378 TMEM182Q6ZP80 229 aaPredicted RBP5.05□□□□□ -1.6
HMGN1-205ENST00000419378 TRPT1Q86TN4 253 aaKnown RBP5.05□□□□□ -1.6
HMGN1-205ENST00000419378 STHQ8IWL8 128 aa5.05□□□□□ -1.6
HMGN1-205ENST00000419378 PRR26Q8N8Z3 221 aa5.05□□□□□ -1.6
HMGN1-205ENST00000419378 BPIFCQ8NFQ6 507 aa5.05□□□□□ -1.6
HMGN1-205ENST00000419378 GATAD1Q8WUU5 269 aa5.05□□□□□ -1.6
HMGN1-205ENST00000419378 PPP1R14BQ96C90 147 aa5.05□□□□□ -1.6
HMGN1-205ENST00000419378 AGRNO00468 2067 aa5.04□□□□□ -1.6
HMGN1-205ENST00000419378 A0A0J9YWU9 116 aa5.04□□□□□ -1.6
HMGN1-205ENST00000419378 FNDC10F2Z333 226 aa5.04□□□□□ -1.6
HMGN1-205ENST00000419378 IL5P05113 134 aa5.04□□□□□ -1.6
HMGN1-205ENST00000419378 GIG44P09565 113 aaPredicted RBP5.04□□□□□ -1.6
HMGN1-205ENST00000419378 ORM2P19652 201 aa5.04□□□□□ -1.6
HMGN1-205ENST00000419378 C4BPBP20851 252 aa5.04□□□□□ -1.6
HMGN1-205ENST00000419378 AMTP48728 403 aa5.04□□□□□ -1.6
HMGN1-205ENST00000419378 EWSR1Q01844 656 aaKnown RBP eCLIP5.04□□□□□ -1.6
HMGN1-205ENST00000419378 SLC38A11Q08AI6 406 aa5.04□□□□□ -1.6
HMGN1-205ENST00000419378 ARL16Q0P5N6 197 aa5.04□□□□□ -1.6
HMGN1-205ENST00000419378 CYP2G1PQ6ZSU1 146 aa5.04□□□□□ -1.6
HMGN1-205ENST00000419378 NRARPQ7Z6K4 114 aa5.04□□□□□ -1.6
HMGN1-205ENST00000419378 OR8I2Q8N0Y5 310 aa5.04□□□□□ -1.6
HMGN1-205ENST00000419378 OR10P1Q8NGE3 313 aa5.04□□□□□ -1.6
HMGN1-205ENST00000419378 OR1B1Q8NGR6 318 aa5.04□□□□□ -1.6
HMGN1-205ENST00000419378 C2orf50Q96LR7 162 aa5.04□□□□□ -1.6
HMGN1-205ENST00000419378 SCRT1Q9BWW7 348 aa5.04□□□□□ -1.6
HMGN1-205ENST00000419378 DOK5Q9P104 306 aa5.04□□□□□ -1.6
HMGN1-205ENST00000419378 LSM5Q9Y4Y9 91 aaKnown RBP5.04□□□□□ -1.6
HMGN1-205ENST00000419378 HYDINQ4G0P3 5121 aa5.03□□□□□ -1.6
HMGN1-205ENST00000419378 ZNF98A6NK75 572 aa5.03□□□□□ -1.6
HMGN1-205ENST00000419378 SOCS3O14543 225 aa5.03□□□□□ -1.6
HMGN1-205ENST00000419378 LINC00869P0C866 280 aa5.03□□□□□ -1.6
HMGN1-205ENST00000419378 SPP1P10451 314 aa5.03□□□□□ -1.6
HMGN1-205ENST00000419378 PSMB3P49720 205 aa5.03□□□□□ -1.6
HMGN1-205ENST00000419378 BCAP31P51572 246 aa5.03□□□□□ -1.6
HMGN1-205ENST00000419378 CAV2P51636 162 aa5.03□□□□□ -1.6
HMGN1-205ENST00000419378 S100A10P60903 97 aa5.03□□□□□ -1.6
HMGN1-205ENST00000419378 IL15RAQ13261 267 aa5.03□□□□□ -1.6
HMGN1-205ENST00000419378 MORN3Q6PF18 240 aaPredicted RBP5.03□□□□□ -1.6
HMGN1-205ENST00000419378 GSG1LQ6UXU4 331 aa5.03□□□□□ -1.6
HMGN1-205ENST00000419378 OR11H2Q8NH07 326 aa5.03□□□□□ -1.6
HMGN1-205ENST00000419378 SAT2Q96F10 170 aaPredicted RBP5.03□□□□□ -1.6
HMGN1-205ENST00000419378 TMEM147Q9BVK8 224 aa5.03□□□□□ -1.6
HMGN1-205ENST00000419378 GGACTQ9BVM4 153 aa5.03□□□□□ -1.6
HMGN1-205ENST00000419378 C11orf1Q9H5F2 150 aa5.03□□□□□ -1.6
HMGN1-205ENST00000419378 SLC25A22Q9H936 323 aa5.03□□□□□ -1.6
HMGN1-205ENST00000419378 GPN1Q9HCN4 374 aaPredicted RBP5.03□□□□□ -1.6
HMGN1-205ENST00000419378 NPVFQ9HCQ7 196 aa5.03□□□□□ -1.6
HMGN1-205ENST00000419378 LYRM2Q9NU23 88 aaPredicted RBP5.03□□□□□ -1.6
HMGN1-205ENST00000419378 LCE6AA0A183 80 aa5.02□□□□□ -1.61
HMGN1-205ENST00000419378 hDV102S1A0JD36 115 aa5.02□□□□□ -1.61
HMGN1-205ENST00000419378 IGSF23A1L1A6 192 aa5.02□□□□□ -1.61
HMGN1-205ENST00000419378 FAM24AA6NFZ4 105 aa5.02□□□□□ -1.61
HMGN1-205ENST00000419378 INMT-MINDY4F8WBC2 141 aa5.02□□□□□ -1.61
HMGN1-205ENST00000419378 H3BRN7 92 aa5.02□□□□□ -1.61
HMGN1-205ENST00000419378 ISLRO14498 428 aa5.02□□□□□ -1.61
HMGN1-205ENST00000419378 GOSR2O14653 212 aa5.02□□□□□ -1.61
HMGN1-205ENST00000419378 AGPAT2O15120 278 aa5.02□□□□□ -1.61
HMGN1-205ENST00000419378 PRAF2O60831 178 aa5.02□□□□□ -1.61
HMGN1-205ENST00000419378 HYPMO75409 117 aa5.02□□□□□ -1.61
HMGN1-205ENST00000419378 DEDDO75618 318 aa5.02□□□□□ -1.61
HMGN1-205ENST00000419378 CST7O76096 145 aa5.02□□□□□ -1.61
HMGN1-205ENST00000419378 HLA-DRB4P13762 266 aa5.02□□□□□ -1.61
HMGN1-205ENST00000419378 PVALBP20472 110 aaPredicted RBP5.02□□□□□ -1.61
HMGN1-205ENST00000419378 S100A7P31151 101 aa5.02□□□□□ -1.61
HMGN1-205ENST00000419378 ID1P41134 155 aa5.02□□□□□ -1.61
HMGN1-205ENST00000419378 GALR1P47211 349 aa5.02□□□□□ -1.61
HMGN1-205ENST00000419378 MEOX2P50222 304 aa5.02□□□□□ -1.61
HMGN1-205ENST00000419378 DEFA1P59665 94 aa5.02□□□□□ -1.61
HMGN1-205ENST00000419378 DEFA3P59666 94 aa5.02□□□□□ -1.61
HMGN1-205ENST00000419378 DEFB1P60022 68 aa5.02□□□□□ -1.61
HMGN1-205ENST00000419378 PLP1P60201 277 aa5.02□□□□□ -1.61
HMGN1-205ENST00000419378 SELENOTP62341 195 aa5.02□□□□□ -1.61
HMGN1-205ENST00000419378 TMEM41BQ5BJD5 291 aa5.02□□□□□ -1.61
HMGN1-205ENST00000419378 SAMD13Q5VXD3 122 aa5.02□□□□□ -1.61
HMGN1-205ENST00000419378 ZNF546Q86UE3 836 aa5.02□□□□□ -1.61
HMGN1-205ENST00000419378 C17orf77Q96MU5 243 aa5.02□□□□□ -1.61
HMGN1-205ENST00000419378 LINC00052Q96N35 136 aa5.02□□□□□ -1.61
HMGN1-205ENST00000419378 GPR82Q96P67 336 aa5.02□□□□□ -1.61
HMGN1-205ENST00000419378 UHRF2Q96PU4 802 aa5.02□□□□□ -1.61
HMGN1-205ENST00000419378 MGST2Q99735 147 aa5.02□□□□□ -1.61
HMGN1-205ENST00000419378 RARRES2Q99969 163 aa5.02□□□□□ -1.61
HMGN1-205ENST00000419378 MARVELD1Q9BSK0 173 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms