RNA–Protein interactions for RNA: ENST00000417440.2

CASP4-202, Transcript of caspase 4, humanhuman

TSL 3

Gene CASP4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-202ENST00000417440 SAMD13Q5VXD3 122 aa5.05□□□□□ -1.6
CASP4-202ENST00000417440 TMEM182Q6ZP80 229 aaPredicted RBP5.05□□□□□ -1.6
CASP4-202ENST00000417440 GPR141Q7Z602 305 aa5.05□□□□□ -1.6
CASP4-202ENST00000417440 TMED4Q7Z7H5 227 aa5.05□□□□□ -1.6
CASP4-202ENST00000417440 C17orf77Q96MU5 243 aa5.05□□□□□ -1.6
CASP4-202ENST00000417440 PRRT1Q99946 306 aa5.05□□□□□ -1.6
CASP4-202ENST00000417440 TMEM147Q9BVK8 224 aa5.05□□□□□ -1.6
CASP4-202ENST00000417440 Q9H8V8 135 aa5.05□□□□□ -1.6
CASP4-202ENST00000417440 NOP10Q9NPE3 64 aaKnown RBP5.05□□□□□ -1.6
CASP4-202ENST00000417440 SHPKQ9UHJ6 478 aa5.05□□□□□ -1.6
CASP4-202ENST00000417440 LRP1BQ9NZR2 4599 aa5.05□□□□□ -1.6
CASP4-202ENST00000417440 DNAH5Q8TE73 4624 aa5.04□□□□□ -1.6
CASP4-202ENST00000417440 TRAV8-2A0A0B4J237 113 aa5.04□□□□□ -1.6
CASP4-202ENST00000417440 SMCO3A2RU48 225 aa5.04□□□□□ -1.6
CASP4-202ENST00000417440 CBY3A6NI87 242 aa5.04□□□□□ -1.6
CASP4-202ENST00000417440 BOLA2-SMG1P6H3BVE0 249 aa5.04□□□□□ -1.6
CASP4-202ENST00000417440 WRBO00258 174 aa5.04□□□□□ -1.6
CASP4-202ENST00000417440 ANXA3P12429 323 aa5.04□□□□□ -1.6
CASP4-202ENST00000417440 FUSP35637 526 aaKnown RBP eCLIP5.04□□□□□ -1.6
CASP4-202ENST00000417440 AKR1C1Q04828 323 aa5.04□□□□□ -1.6
CASP4-202ENST00000417440 CTF1Q16619 201 aa5.04□□□□□ -1.6
CASP4-202ENST00000417440 GGNBP1Q5YKI7 109 aa5.04□□□□□ -1.6
CASP4-202ENST00000417440 TMEM144Q7Z5S9 345 aa5.04□□□□□ -1.6
CASP4-202ENST00000417440 THAP8Q8NA92 274 aa5.04□□□□□ -1.6
CASP4-202ENST00000417440 BPIFCQ8NFQ6 507 aa5.04□□□□□ -1.6
CASP4-202ENST00000417440 SVIPQ8NHG7 77 aa5.04□□□□□ -1.6
CASP4-202ENST00000417440 LRRC20Q8TCA0 184 aa5.04□□□□□ -1.6
CASP4-202ENST00000417440 SMIM4Q8WVI0 70 aa5.04□□□□□ -1.6
CASP4-202ENST00000417440 SCP2D1Q9UJQ7 156 aa5.04□□□□□ -1.6
CASP4-202ENST00000417440 HERC1Q15751 4861 aa5.03□□□□□ -1.6
CASP4-202ENST00000417440 TRAV26-1A0A087WT03 109 aa5.03□□□□□ -1.6
CASP4-202ENST00000417440 PLAC8L1A1L4L8 177 aa5.03□□□□□ -1.6
CASP4-202ENST00000417440 A8MTW9 85 aa5.03□□□□□ -1.6
CASP4-202ENST00000417440 H3BP45 60 aa5.03□□□□□ -1.6
CASP4-202ENST00000417440 GAGE7O76087 117 aa5.03□□□□□ -1.6
CASP4-202ENST00000417440 CFDP00746 253 aaPredicted RBP5.03□□□□□ -1.6
CASP4-202ENST00000417440 SNRPCP09234 159 aaKnown RBP5.03□□□□□ -1.6
CASP4-202ENST00000417440 OR5G3P0C626 314 aa5.03□□□□□ -1.6
CASP4-202ENST00000417440 GAGE12FP0CL80 117 aa5.03□□□□□ -1.6
CASP4-202ENST00000417440 GAGE12GP0CL81 117 aa5.03□□□□□ -1.6
CASP4-202ENST00000417440 GAGE12IP0CL82 117 aa5.03□□□□□ -1.6
CASP4-202ENST00000417440 TSPOP30536 169 aa5.03□□□□□ -1.6
CASP4-202ENST00000417440 ATP5IP56385 69 aaPredicted RBP5.03□□□□□ -1.6
CASP4-202ENST00000417440 KRTAP10-2P60368 255 aa5.03□□□□□ -1.6
CASP4-202ENST00000417440 B2MP61769 119 aa5.03□□□□□ -1.6
CASP4-202ENST00000417440 RPP30P78346 268 aaKnown RBP5.03□□□□□ -1.6
CASP4-202ENST00000417440 MRPS10P82664 201 aaKnown RBP5.03□□□□□ -1.6
CASP4-202ENST00000417440 SSBP1Q04837 148 aaKnown RBP5.03□□□□□ -1.6
CASP4-202ENST00000417440 SPANXN5Q5MJ07 72 aa5.03□□□□□ -1.6
CASP4-202ENST00000417440 GNPNAT1Q96EK6 184 aaPredicted RBP5.03□□□□□ -1.6
CASP4-202ENST00000417440 C16orf74Q96GX8 76 aa5.03□□□□□ -1.6
CASP4-202ENST00000417440 DIRAS2Q96HU8 199 aa5.03□□□□□ -1.6
CASP4-202ENST00000417440 SCGB3A2Q96PL1 93 aa5.03□□□□□ -1.6
CASP4-202ENST00000417440 KRTAP1-5Q9BYS1 174 aa5.03□□□□□ -1.6
CASP4-202ENST00000417440 TIMM8BQ9Y5J9 83 aaPredicted RBP5.03□□□□□ -1.6
CASP4-202ENST00000417440 ANKRD20A5PA0PJZ0 165 aa5.02□□□□□ -1.61
CASP4-202ENST00000417440 J3KRW8 73 aa5.02□□□□□ -1.61
CASP4-202ENST00000417440 MED6O75586 246 aa5.02□□□□□ -1.61
CASP4-202ENST00000417440 IL5P05113 134 aa5.02□□□□□ -1.61
CASP4-202ENST00000417440 ANXA7P20073 488 aaKnown RBP5.02□□□□□ -1.61
CASP4-202ENST00000417440 S100A7P31151 101 aa5.02□□□□□ -1.61
CASP4-202ENST00000417440 TAS2R60P59551 318 aa5.02□□□□□ -1.61
CASP4-202ENST00000417440 SRPXP78539 464 aa5.02□□□□□ -1.61
CASP4-202ENST00000417440 SPCS2Q15005 226 aa5.02□□□□□ -1.61
CASP4-202ENST00000417440 OR8A1Q8NGG7 326 aa5.02□□□□□ -1.61
CASP4-202ENST00000417440 OR4D5Q8NGN0 318 aa5.02□□□□□ -1.61
CASP4-202ENST00000417440 GPR82Q96P67 336 aa5.02□□□□□ -1.61
CASP4-202ENST00000417440 PARD6GQ9BYG4 376 aaPredicted RBP5.02□□□□□ -1.61
CASP4-202ENST00000417440 ZNF586Q9NXT0 402 aa5.02□□□□□ -1.61
CASP4-202ENST00000417440 NACAE9PAV3 2078 aa5.01□□□□□ -1.61
CASP4-202ENST00000417440 APOBP04114 4563 aaKnown RBP5.01□□□□□ -1.61
CASP4-202ENST00000417440 EPM2AB3EWF7 344 aa5.01□□□□□ -1.61
CASP4-202ENST00000417440 H3BRN7 92 aa5.01□□□□□ -1.61
CASP4-202ENST00000417440 SYNGR2O43760 224 aa5.01□□□□□ -1.61
CASP4-202ENST00000417440 PITX3O75364 302 aa5.01□□□□□ -1.61
CASP4-202ENST00000417440 HYPMO75409 117 aa5.01□□□□□ -1.61
CASP4-202ENST00000417440 HOXB5P09067 269 aa5.01□□□□□ -1.61
CASP4-202ENST00000417440 CXCL3P19876 107 aa5.01□□□□□ -1.61
CASP4-202ENST00000417440 M6PRP20645 277 aa5.01□□□□□ -1.61
CASP4-202ENST00000417440 PSG3Q16557 428 aa5.01□□□□□ -1.61
CASP4-202ENST00000417440 ESRGQ1W209 222 aa5.01□□□□□ -1.61
CASP4-202ENST00000417440 TTC32Q5I0X7 151 aa5.01□□□□□ -1.61
CASP4-202ENST00000417440 CYP2G1PQ6ZSU1 146 aa5.01□□□□□ -1.61
CASP4-202ENST00000417440 ACOT7LQ6ZUV0 252 aa5.01□□□□□ -1.61
CASP4-202ENST00000417440 CCDC190Q86UF4 302 aa5.01□□□□□ -1.61
CASP4-202ENST00000417440 CCDC28AQ8IWP9 274 aa5.01□□□□□ -1.61
CASP4-202ENST00000417440 TMEM256Q8N2U0 113 aa5.01□□□□□ -1.61
CASP4-202ENST00000417440 OR10J6PQ8NGY7 276 aa5.01□□□□□ -1.61
CASP4-202ENST00000417440 RXFP4Q8TDU9 374 aa5.01□□□□□ -1.61
CASP4-202ENST00000417440 RPUSD4Q96CM3 377 aaKnown RBP5.01□□□□□ -1.61
CASP4-202ENST00000417440 CIB3Q96Q77 187 aaPredicted RBP5.01□□□□□ -1.61
CASP4-202ENST00000417440 SHANK2-AS3Q9BTD1 123 aa5.01□□□□□ -1.61
CASP4-202ENST00000417440 HIGD1AQ9Y241 93 aa5.01□□□□□ -1.61
CASP4-202ENST00000417440 STRAPQ9Y3F4 350 aaKnown RBP5.01□□□□□ -1.61
CASP4-202ENST00000417440 A0A087WWL8 130 aa5□□□□□ -1.61
CASP4-202ENST00000417440 KRTAP9-7A8MTY7 169 aa5□□□□□ -1.61
CASP4-202ENST00000417440 PRSS46E5RG02 174 aa5□□□□□ -1.61
CASP4-202ENST00000417440 H3BTX0 84 aa5□□□□□ -1.61
CASP4-202ENST00000417440 ZNF701M0R085 212 aaPredicted RBP5□□□□□ -1.61
CASP4-202ENST00000417440 CTDSPLO15194 276 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms