RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 ORM2P19652 201 aa9.38□□□□□ -0.91
LINC00339-202ENST00000416769 CRYBB3P26998 211 aa9.38□□□□□ -0.91
LINC00339-202ENST00000416769 LYZP61626 148 aa9.38□□□□□ -0.91
LINC00339-202ENST00000416769 USF2Q15853 346 aaPredicted RBP9.38□□□□□ -0.91
LINC00339-202ENST00000416769 FAM90A2PQ658T7 463 aa9.38□□□□□ -0.91
LINC00339-202ENST00000416769 S100A7AQ86SG5 101 aa9.38□□□□□ -0.91
LINC00339-202ENST00000416769 BAP18Q8IXM2 172 aa9.38□□□□□ -0.91
LINC00339-202ENST00000416769 OR1L4Q8NGR5 311 aa9.38□□□□□ -0.91
LINC00339-202ENST00000416769 OR2G3Q8NGZ4 309 aa9.38□□□□□ -0.91
LINC00339-202ENST00000416769 STOML3Q8TAV4 291 aa9.38□□□□□ -0.91
LINC00339-202ENST00000416769 METTL26Q96S19 204 aa9.38□□□□□ -0.91
LINC00339-202ENST00000416769 SCRT1Q9BWW7 348 aa9.38□□□□□ -0.91
LINC00339-202ENST00000416769 C11orf68Q9H3H3 251 aaKnown RBP9.38□□□□□ -0.91
LINC00339-202ENST00000416769 DNAJC4Q9NNZ3 241 aa9.38□□□□□ -0.91
LINC00339-202ENST00000416769 PFDN2Q9UHV9 154 aa9.38□□□□□ -0.91
LINC00339-202ENST00000416769 RABAC1Q9UI14 185 aa9.38□□□□□ -0.91
LINC00339-202ENST00000416769 U3KQE9 123 aa9.38□□□□□ -0.91
LINC00339-202ENST00000416769 A0A1B0GVY2 172 aa9.37□□□□□ -0.91
LINC00339-202ENST00000416769 A0A1W2PS18 150 aa9.37□□□□□ -0.91
LINC00339-202ENST00000416769 GIG44P09565 113 aaPredicted RBP9.37□□□□□ -0.91
LINC00339-202ENST00000416769 SEC11BP0C7V7 166 aa9.37□□□□□ -0.91
LINC00339-202ENST00000416769 RBMY1A1P0DJD3 496 aaKnown RBP9.37□□□□□ -0.91
LINC00339-202ENST00000416769 RBMY1CP0DJD4 496 aa9.37□□□□□ -0.91
LINC00339-202ENST00000416769 SPP1P10451 314 aa9.37□□□□□ -0.91
LINC00339-202ENST00000416769 RBMY1FQ15415 496 aaKnown RBP9.37□□□□□ -0.91
LINC00339-202ENST00000416769 PATE2Q6UY27 113 aa9.37□□□□□ -0.91
LINC00339-202ENST00000416769 Q8NAQ8 132 aa9.37□□□□□ -0.91
LINC00339-202ENST00000416769 OR1B1Q8NGR6 318 aa9.37□□□□□ -0.91
LINC00339-202ENST00000416769 C2CD4CQ8TF44 421 aa9.37□□□□□ -0.91
LINC00339-202ENST00000416769 PFDN5Q99471 154 aa9.37□□□□□ -0.91
LINC00339-202ENST00000416769 PBDC1Q9BVG4 233 aa9.37□□□□□ -0.91
LINC00339-202ENST00000416769 RFNGQ9Y644 331 aa9.37□□□□□ -0.91
LINC00339-202ENST00000416769 MBP02144 154 aa9.36□□□□□ -0.91
LINC00339-202ENST00000416769 OR5G3P0C626 314 aa9.36□□□□□ -0.91
LINC00339-202ENST00000416769 ACOT6Q3I5F7 207 aaPredicted RBP9.36□□□□□ -0.91
LINC00339-202ENST00000416769 FFAR4Q5NUL3 377 aa9.36□□□□□ -0.91
LINC00339-202ENST00000416769 ZNF767PQ75MW2 155 aa9.36□□□□□ -0.91
LINC00339-202ENST00000416769 TMEM37Q8WXS4 190 aa9.36□□□□□ -0.91
LINC00339-202ENST00000416769 ST8SIA2Q92186 375 aa9.36□□□□□ -0.91
LINC00339-202ENST00000416769 NARS2Q96I59 477 aaKnown RBP9.36□□□□□ -0.91
LINC00339-202ENST00000416769 KRTAP4-5Q9BYR2 181 aa9.36□□□□□ -0.91
LINC00339-202ENST00000416769 SLC25A32Q9H2D1 315 aa9.36□□□□□ -0.91
LINC00339-202ENST00000416769 VSIRQ9H7M9 311 aa9.36□□□□□ -0.91
LINC00339-202ENST00000416769 HIGD1AQ9Y241 93 aa9.36□□□□□ -0.91
LINC00339-202ENST00000416769 IGHV4-28A0A0C4DH34 117 aa9.35□□□□□ -0.91
LINC00339-202ENST00000416769 BUB3O43684 328 aa9.35□□□□□ -0.91
LINC00339-202ENST00000416769 COX7A2P2O60397 106 aa9.35□□□□□ -0.91
LINC00339-202ENST00000416769 M6PRP20645 277 aa9.35□□□□□ -0.91
LINC00339-202ENST00000416769 DEFB131AP59861 70 aa9.35□□□□□ -0.91
LINC00339-202ENST00000416769 C10orf113Q5VZT2 155 aa9.35□□□□□ -0.91
LINC00339-202ENST00000416769 EIF5AL1Q6IS14 154 aaKnown RBP9.35□□□□□ -0.91
LINC00339-202ENST00000416769 Q6ZTC4 211 aa9.35□□□□□ -0.91
LINC00339-202ENST00000416769 TCF24Q7RTU0 167 aa9.35□□□□□ -0.91
LINC00339-202ENST00000416769 SLC25A39Q9BZJ4 359 aaPredicted RBP9.35□□□□□ -0.91
LINC00339-202ENST00000416769 SH3BGRL3Q9H299 93 aa9.35□□□□□ -0.91
LINC00339-202ENST00000416769 DOK5Q9P104 306 aa9.35□□□□□ -0.91
LINC00339-202ENST00000416769 RNF24Q9Y225 148 aa9.35□□□□□ -0.91
LINC00339-202ENST00000416769 ZNF98A6NK75 572 aa9.34□□□□□ -0.91
LINC00339-202ENST00000416769 H3BRN7 92 aa9.34□□□□□ -0.91
LINC00339-202ENST00000416769 HLA-DMBP28068 263 aa9.34□□□□□ -0.91
LINC00339-202ENST00000416769 C1orf194Q5T5A4 169 aa9.34□□□□□ -0.91
LINC00339-202ENST00000416769 C16orf54Q6UWD8 224 aa9.34□□□□□ -0.91
LINC00339-202ENST00000416769 LINC00305Q7Z4B0 112 aa9.34□□□□□ -0.91
LINC00339-202ENST00000416769 GRAMD2BQ96HH9 432 aa9.34□□□□□ -0.91
LINC00339-202ENST00000416769 SHANK2-AS3Q9BTD1 123 aa9.34□□□□□ -0.91
LINC00339-202ENST00000416769 TMEM231Q9H6L2 316 aa9.34□□□□□ -0.91
LINC00339-202ENST00000416769 KNCNA6PVL3 124 aa9.33□□□□□ -0.92
LINC00339-202ENST00000416769 CD5P06127 495 aa9.33□□□□□ -0.92
LINC00339-202ENST00000416769 RHOBP62745 196 aa9.33□□□□□ -0.92
LINC00339-202ENST00000416769 GCSAMLQ5JQS6 135 aa9.33□□□□□ -0.92
LINC00339-202ENST00000416769 FAM78BQ5VT40 261 aa9.33□□□□□ -0.92
LINC00339-202ENST00000416769 OR10G4Q8NGN3 311 aa9.33□□□□□ -0.92
LINC00339-202ENST00000416769 OR10G9Q8NGN4 311 aa9.33□□□□□ -0.92
LINC00339-202ENST00000416769 OR10G7Q8NGN6 311 aa9.33□□□□□ -0.92
LINC00339-202ENST00000416769 MRPL32Q9BYC8 188 aaKnown RBP9.33□□□□□ -0.92
LINC00339-202ENST00000416769 MS4A6AQ9H2W1 248 aa9.33□□□□□ -0.92
LINC00339-202ENST00000416769 CLEC5AQ9NY25 188 aa9.33□□□□□ -0.92
LINC00339-202ENST00000416769 CELA1Q9UNI1 258 aa9.33□□□□□ -0.92
LINC00339-202ENST00000416769 PKD1P98161 4303 aa9.32□□□□□ -0.92
LINC00339-202ENST00000416769 IGHV4-4A0A075B6R2 117 aa9.32□□□□□ -0.92
LINC00339-202ENST00000416769 A0A1W2PPV4 95 aa9.32□□□□□ -0.92
LINC00339-202ENST00000416769 UMAD1C9J7I0 102 aa9.32□□□□□ -0.92
LINC00339-202ENST00000416769 RTL8CO15255 209 aa9.32□□□□□ -0.92
LINC00339-202ENST00000416769 TMEM41BQ5BJD5 291 aa9.32□□□□□ -0.92
LINC00339-202ENST00000416769 AKR1C8PQ5T2L2 129 aa9.32□□□□□ -0.92
LINC00339-202ENST00000416769 PHYHIPLQ96FC7 376 aa9.32□□□□□ -0.92
LINC00339-202ENST00000416769 GPR82Q96P67 336 aa9.32□□□□□ -0.92
LINC00339-202ENST00000416769 UHRF2Q96PU4 802 aa9.32□□□□□ -0.92
LINC00339-202ENST00000416769 SEPSECSQ9HD40 501 aaKnown RBP9.32□□□□□ -0.92
LINC00339-202ENST00000416769 RPRMQ9NS64 109 aa9.32□□□□□ -0.92
LINC00339-202ENST00000416769 FUT9Q9Y231 359 aa9.32□□□□□ -0.92
LINC00339-202ENST00000416769 X6R8D5 127 aa9.32□□□□□ -0.92
LINC00339-202ENST00000416769 M0R2N4 97 aa9.31□□□□□ -0.92
LINC00339-202ENST00000416769 RAB2AP61019 212 aa9.31□□□□□ -0.92
LINC00339-202ENST00000416769 OR8I2Q8N0Y5 310 aa9.31□□□□□ -0.92
LINC00339-202ENST00000416769 TMED6Q8WW62 240 aa9.31□□□□□ -0.92
LINC00339-202ENST00000416769 GLMPQ8WWB7 406 aa9.31□□□□□ -0.92
LINC00339-202ENST00000416769 ACTR3CQ9C0K3 210 aaPredicted RBP9.31□□□□□ -0.92
LINC00339-202ENST00000416769 TRAV5A0A0B4J249 113 aa9.3□□□□□ -0.92
LINC00339-202ENST00000416769 HELTA6NFD8 242 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms