RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 OR10P1Q8NGE3 313 aa10.14□□□□□ -0.79
PAF1-202ENST00000416728 ARL6Q9H0F7 186 aa10.14□□□□□ -0.79
PAF1-202ENST00000416728 NPVFQ9HCQ7 196 aa10.14□□□□□ -0.79
PAF1-202ENST00000416728 MGAT4CQ9UBM8 478 aa10.14□□□□□ -0.79
PAF1-202ENST00000416728 CBY3A6NI87 242 aa10.14□□□□□ -0.79
PAF1-202ENST00000416728 FNDC10F2Z333 226 aa10.14□□□□□ -0.79
PAF1-202ENST00000416728 METTL15P1P0C7V9 234 aa10.14□□□□□ -0.79
PAF1-202ENST00000416728 ANXA7P20073 488 aaKnown RBP10.14□□□□□ -0.79
PAF1-202ENST00000416728 TEPPQ6URK8 271 aa10.14□□□□□ -0.79
PAF1-202ENST00000416728 TMEM14EPQ6UXP3 125 aa10.14□□□□□ -0.79
PAF1-202ENST00000416728 RPUSD4Q96CM3 377 aaKnown RBP10.14□□□□□ -0.79
PAF1-202ENST00000416728 C16orf74Q96GX8 76 aa10.14□□□□□ -0.79
PAF1-202ENST00000416728 ARV1Q9H2C2 271 aa10.14□□□□□ -0.79
PAF1-202ENST00000416728 TIMM8BQ9Y5J9 83 aaPredicted RBP10.14□□□□□ -0.79
PAF1-202ENST00000416728 DYNC1H1Q14204 4646 aaKnown RBP10.13□□□□□ -0.79
PAF1-202ENST00000416728 NAP1L6A6NFF2 107 aa10.13□□□□□ -0.79
PAF1-202ENST00000416728 K7EPK0 472 aa10.13□□□□□ -0.79
PAF1-202ENST00000416728 SCGB1D2O95969 90 aa10.13□□□□□ -0.79
PAF1-202ENST00000416728 OR4E1P0C645 316 aa10.13□□□□□ -0.79
PAF1-202ENST00000416728 PRB4P10163 310 aaPredicted RBP10.13□□□□□ -0.79
PAF1-202ENST00000416728 CDKN1BP46527 198 aa10.13□□□□□ -0.79
PAF1-202ENST00000416728 CCL18P55774 89 aa10.13□□□□□ -0.79
PAF1-202ENST00000416728 SLC38A11Q08AI6 406 aa10.13□□□□□ -0.79
PAF1-202ENST00000416728 C4orf46Q504U0 113 aa10.13□□□□□ -0.79
PAF1-202ENST00000416728 TRIQKQ629K1 86 aa10.13□□□□□ -0.79
PAF1-202ENST00000416728 PATE2Q6UY27 113 aa10.13□□□□□ -0.79
PAF1-202ENST00000416728 ZNRF2Q8NHG8 242 aa10.13□□□□□ -0.79
PAF1-202ENST00000416728 SRRQ9GZT4 340 aa10.13□□□□□ -0.79
PAF1-202ENST00000416728 FLVCR2Q9UPI3 526 aa10.13□□□□□ -0.79
PAF1-202ENST00000416728 NBDYA0A0U1RRE5 68 aa10.12□□□□□ -0.79
PAF1-202ENST00000416728 A6NHS1 94 aa10.12□□□□□ -0.79
PAF1-202ENST00000416728 GOSR2O14653 212 aa10.12□□□□□ -0.79
PAF1-202ENST00000416728 CXCL2P19875 107 aa10.12□□□□□ -0.79
PAF1-202ENST00000416728 IAH1Q2TAA2 248 aaPredicted RBP10.12□□□□□ -0.79
PAF1-202ENST00000416728 PXDC1Q5TGL8 231 aa10.12□□□□□ -0.79
PAF1-202ENST00000416728 LCN15Q6UWW0 184 aa10.12□□□□□ -0.79
PAF1-202ENST00000416728 ZNF546Q86UE3 836 aa10.12□□□□□ -0.79
PAF1-202ENST00000416728 SLC50A1Q9BRV3 221 aa10.12□□□□□ -0.79
PAF1-202ENST00000416728 NACAE9PAV3 2078 aa10.11□□□□□ -0.79
PAF1-202ENST00000416728 MRPS12O15235 138 aaKnown RBP10.11□□□□□ -0.79
PAF1-202ENST00000416728 TSC22D2O75157 780 aa10.11□□□□□ -0.79
PAF1-202ENST00000416728 TAS2R30P59541 319 aa10.11□□□□□ -0.79
PAF1-202ENST00000416728 TNP2Q05952 138 aa10.11□□□□□ -0.79
PAF1-202ENST00000416728 BAK1Q16611 211 aa10.11□□□□□ -0.79
PAF1-202ENST00000416728 ZNF493Q6ZR52 646 aa10.11□□□□□ -0.79
PAF1-202ENST00000416728 LINC00305Q7Z4B0 112 aa10.11□□□□□ -0.79
PAF1-202ENST00000416728 C6orf223Q8N319 242 aa10.11□□□□□ -0.79
PAF1-202ENST00000416728 RNASE8Q8TDE3 154 aaKnown RBP10.11□□□□□ -0.79
PAF1-202ENST00000416728 TMEM263Q8WUH6 116 aaKnown RBP10.11□□□□□ -0.79
PAF1-202ENST00000416728 NOP10Q9NPE3 64 aaKnown RBP10.11□□□□□ -0.79
PAF1-202ENST00000416728 ZNF331Q9NQX6 463 aaPredicted RBP10.11□□□□□ -0.79
PAF1-202ENST00000416728 GSKIPQ9P0R6 139 aa10.11□□□□□ -0.79
PAF1-202ENST00000416728 LINC00854A0A1B0GVQ3 168 aa10.1□□□□□ -0.79
PAF1-202ENST00000416728 H7BYZ3 331 aa10.1□□□□□ -0.79
PAF1-202ENST00000416728 AGPAT2O15120 278 aa10.1□□□□□ -0.79
PAF1-202ENST00000416728 SNRPCP09234 159 aaKnown RBP10.1□□□□□ -0.79
PAF1-202ENST00000416728 CLINT1Q14677 625 aa10.1□□□□□ -0.79
PAF1-202ENST00000416728 BPIFA4PQ86YQ2 179 aa10.1□□□□□ -0.79
PAF1-202ENST00000416728 RNF141Q8WVD5 230 aa10.1□□□□□ -0.79
PAF1-202ENST00000416728 GGACTQ9BVM4 153 aa10.1□□□□□ -0.79
PAF1-202ENST00000416728 PKD1P98161 4303 aa10.09□□□□□ -0.79
PAF1-202ENST00000416728 CENPXA8MT69 81 aa10.09□□□□□ -0.79
PAF1-202ENST00000416728 C16orf90A8MZG2 172 aa10.09□□□□□ -0.79
PAF1-202ENST00000416728 COX7A2P2O60397 106 aa10.09□□□□□ -0.79
PAF1-202ENST00000416728 ZBTB8BQ8NAP8 495 aaPredicted RBP10.09□□□□□ -0.79
PAF1-202ENST00000416728 OR10J6PQ8NGY7 276 aa10.09□□□□□ -0.79
PAF1-202ENST00000416728 C20orf144Q9BQM9 153 aa10.09□□□□□ -0.79
PAF1-202ENST00000416728 RCL1Q9Y2P8 373 aaKnown RBP10.09□□□□□ -0.79
PAF1-202ENST00000416728 LINC00588Q9Y4M8 146 aa10.09□□□□□ -0.79
PAF1-202ENST00000416728 ARL16Q0P5N6 197 aa10.08□□□□□ -0.8
PAF1-202ENST00000416728 SSX7Q7RTT5 188 aa10.08□□□□□ -0.8
PAF1-202ENST00000416728 CCDC28AQ8IWP9 274 aa10.08□□□□□ -0.8
PAF1-202ENST00000416728 RBM38Q9H0Z9 239 aaKnown RBP10.08□□□□□ -0.8
PAF1-202ENST00000416728 MUC4Q99102 2169 aa10.07□□□□□ -0.8
PAF1-202ENST00000416728 C7orf66A4D0T2 115 aa10.07□□□□□ -0.8
PAF1-202ENST00000416728 H3BTX0 84 aa10.07□□□□□ -0.8
PAF1-202ENST00000416728 MBPP02686 304 aaPredicted RBP10.07□□□□□ -0.8
PAF1-202ENST00000416728 BTCP35070 178 aa10.07□□□□□ -0.8
PAF1-202ENST00000416728 OR5I1Q13606 314 aa10.07□□□□□ -0.8
PAF1-202ENST00000416728 KIR3DS1Q14943 382 aa10.07□□□□□ -0.8
PAF1-202ENST00000416728 GFI1BQ5VTD9 330 aa10.07□□□□□ -0.8
PAF1-202ENST00000416728 C10orf113Q5VZT2 155 aa10.07□□□□□ -0.8
PAF1-202ENST00000416728 MITD1Q8WV92 249 aa10.07□□□□□ -0.8
PAF1-202ENST00000416728 GNPNAT1Q96EK6 184 aaPredicted RBP10.07□□□□□ -0.8
PAF1-202ENST00000416728 MGST2Q99735 147 aa10.07□□□□□ -0.8
PAF1-202ENST00000416728 PARD6GQ9BYG4 376 aaPredicted RBP10.07□□□□□ -0.8
PAF1-202ENST00000416728 PXMP4Q9Y6I8 212 aa10.07□□□□□ -0.8
PAF1-202ENST00000416728 RYR1P21817 5038 aa10.07□□□□□ -0.8
PAF1-202ENST00000416728 PRAC2D3DTV9 90 aa10.06□□□□□ -0.8
PAF1-202ENST00000416728 L7N2F9 121 aa10.06□□□□□ -0.8
PAF1-202ENST00000416728 SLC17A3O00476 420 aa10.06□□□□□ -0.8
PAF1-202ENST00000416728 M6PRP20645 277 aa10.06□□□□□ -0.8
PAF1-202ENST00000416728 VAMP2P63027 116 aa10.06□□□□□ -0.8
PAF1-202ENST00000416728 RAB31Q13636 194 aa10.06□□□□□ -0.8
PAF1-202ENST00000416728 OPCMLQ14982 345 aa10.06□□□□□ -0.8
PAF1-202ENST00000416728 MORN5Q5VZ52 161 aa10.06□□□□□ -0.8
PAF1-202ENST00000416728 TMEM37Q8WXS4 190 aa10.06□□□□□ -0.8
PAF1-202ENST00000416728 TRAV26-1A0A087WT03 109 aa10.05□□□□□ -0.8
PAF1-202ENST00000416728 SNURFLB1AK76 121 aa10.05□□□□□ -0.8
PAF1-202ENST00000416728 ZNF701M0R085 212 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms