RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 ZNF738Q8NE65 137 aa10.72□□□□□ -0.69
UBXN4-203ENST00000416538 ZNF431Q8TF32 576 aaPredicted RBP10.72□□□□□ -0.69
UBXN4-203ENST00000416538 LSM5Q9Y4Y9 91 aaKnown RBP10.72□□□□□ -0.69
UBXN4-203ENST00000416538 TRAV12-2A0A075B6T6 113 aa10.71□□□□□ -0.69
UBXN4-203ENST00000416538 PLAC8L1A1L4L8 177 aa10.71□□□□□ -0.69
UBXN4-203ENST00000416538 ZNF705GA8MUZ8 300 aaPredicted RBP10.71□□□□□ -0.69
UBXN4-203ENST00000416538 SLC17A3O00476 420 aa10.71□□□□□ -0.69
UBXN4-203ENST00000416538 RRN3P1Q2M238 152 aa10.71□□□□□ -0.69
UBXN4-203ENST00000416538 ZNF546Q86UE3 836 aa10.71□□□□□ -0.69
UBXN4-203ENST00000416538 OR8A1Q8NGG7 326 aa10.71□□□□□ -0.69
UBXN4-203ENST00000416538 TMEM37Q8WXS4 190 aa10.71□□□□□ -0.69
UBXN4-203ENST00000416538 NIPSNAP3BQ9BS92 247 aa10.71□□□□□ -0.69
UBXN4-203ENST00000416538 DNAH17Q9UFH2 4485 aa10.7□□□□□ -0.7
UBXN4-203ENST00000416538 FAM24AA6NFZ4 105 aa10.7□□□□□ -0.7
UBXN4-203ENST00000416538 FAM25EA8MYX2 175 aa10.7□□□□□ -0.7
UBXN4-203ENST00000416538 H3BTX0 84 aa10.7□□□□□ -0.7
UBXN4-203ENST00000416538 BOLA2-SMG1P6H3BVE0 249 aa10.7□□□□□ -0.7
UBXN4-203ENST00000416538 CST7O76096 145 aa10.7□□□□□ -0.7
UBXN4-203ENST00000416538 INSP01308 110 aa10.7□□□□□ -0.7
UBXN4-203ENST00000416538 HIST1H1AQ02539 215 aaPredicted RBP10.7□□□□□ -0.7
UBXN4-203ENST00000416538 IL15RAQ13261 267 aa10.7□□□□□ -0.7
UBXN4-203ENST00000416538 OPCMLQ14982 345 aa10.7□□□□□ -0.7
UBXN4-203ENST00000416538 NDUFAF3Q9BU61 184 aa10.7□□□□□ -0.7
UBXN4-203ENST00000416538 CCDC32Q9BV29 185 aa10.7□□□□□ -0.7
UBXN4-203ENST00000416538 IGSF23A1L1A6 192 aa10.69□□□□□ -0.7
UBXN4-203ENST00000416538 DUSP14O95147 198 aaKnown RBP10.69□□□□□ -0.7
UBXN4-203ENST00000416538 AZU1P20160 251 aa10.69□□□□□ -0.7
UBXN4-203ENST00000416538 KIR3DS1Q14943 382 aa10.69□□□□□ -0.7
UBXN4-203ENST00000416538 PSG3Q16557 428 aa10.69□□□□□ -0.7
UBXN4-203ENST00000416538 MIC13Q5XKP0 118 aa10.69□□□□□ -0.7
UBXN4-203ENST00000416538 LINC00305Q7Z4B0 112 aa10.69□□□□□ -0.7
UBXN4-203ENST00000416538 C12orf45Q8N5I9 185 aaPredicted RBP10.69□□□□□ -0.7
UBXN4-203ENST00000416538 GGACTQ9BVM4 153 aa10.69□□□□□ -0.7
UBXN4-203ENST00000416538 PARD6GQ9BYG4 376 aaPredicted RBP10.69□□□□□ -0.7
UBXN4-203ENST00000416538 ZNF331Q9NQX6 463 aaPredicted RBP10.69□□□□□ -0.7
UBXN4-203ENST00000416538 HERC2O95714 4834 aa10.68□□□□□ -0.7
UBXN4-203ENST00000416538 PRAC2D3DTV9 90 aa10.68□□□□□ -0.7
UBXN4-203ENST00000416538 GOSR2O14653 212 aa10.68□□□□□ -0.7
UBXN4-203ENST00000416538 H2AFB2P0C5Z0 115 aa10.68□□□□□ -0.7
UBXN4-203ENST00000416538 HTN3P15516 51 aa10.68□□□□□ -0.7
UBXN4-203ENST00000416538 S100A7P31151 101 aa10.68□□□□□ -0.7
UBXN4-203ENST00000416538 CAV2P51636 162 aa10.68□□□□□ -0.7
UBXN4-203ENST00000416538 ZNF846Q147U1 533 aa10.68□□□□□ -0.7
UBXN4-203ENST00000416538 OXA1LQ15070 435 aa10.68□□□□□ -0.7
UBXN4-203ENST00000416538 LINC00299Q6ZSB3 139 aa10.68□□□□□ -0.7
UBXN4-203ENST00000416538 POM121L12Q8N7R1 296 aa10.68□□□□□ -0.7
UBXN4-203ENST00000416538 C2orf50Q96LR7 162 aa10.68□□□□□ -0.7
UBXN4-203ENST00000416538 TRAV5A0A0B4J249 113 aa10.67□□□□□ -0.7
UBXN4-203ENST00000416538 UBE2L5PA0A1B0GUS4 154 aa10.67□□□□□ -0.7
UBXN4-203ENST00000416538 TEX48A0A1B0GUV7 120 aa10.67□□□□□ -0.7
UBXN4-203ENST00000416538 C5orf51A6NDU8 294 aa10.67□□□□□ -0.7
UBXN4-203ENST00000416538 H3BQ15 152 aa10.67□□□□□ -0.7
UBXN4-203ENST00000416538 L7N2F9 121 aa10.67□□□□□ -0.7
UBXN4-203ENST00000416538 P0DMU3 169 aa10.67□□□□□ -0.7
UBXN4-203ENST00000416538 FAM231AP0DMU4 169 aa10.67□□□□□ -0.7
UBXN4-203ENST00000416538 FAM231CP0DMU5 169 aa10.67□□□□□ -0.7
UBXN4-203ENST00000416538 IGLC2P0DOY2 106 aa10.67□□□□□ -0.7
UBXN4-203ENST00000416538 VAMP2P63027 116 aa10.67□□□□□ -0.7
UBXN4-203ENST00000416538 RAB32Q13637 225 aa10.67□□□□□ -0.7
UBXN4-203ENST00000416538 VWC2Q2TAL6 325 aa10.67□□□□□ -0.7
UBXN4-203ENST00000416538 PXDC1Q5TGL8 231 aa10.67□□□□□ -0.7
UBXN4-203ENST00000416538 NRARPQ7Z6K4 114 aa10.67□□□□□ -0.7
UBXN4-203ENST00000416538 RPUSD4Q96CM3 377 aaKnown RBP10.67□□□□□ -0.7
UBXN4-203ENST00000416538 TMEM208Q9BTX3 173 aa10.67□□□□□ -0.7
UBXN4-203ENST00000416538 WDR83OSQ9Y284 106 aa10.67□□□□□ -0.7
UBXN4-203ENST00000416538 PKHD1P08F94 4074 aa10.67□□□□□ -0.7
UBXN4-203ENST00000416538 A0A1B0GVY2 172 aa10.66□□□□□ -0.7
UBXN4-203ENST00000416538 COX7A2P2O60397 106 aa10.66□□□□□ -0.7
UBXN4-203ENST00000416538 CXCL2P19875 107 aa10.66□□□□□ -0.7
UBXN4-203ENST00000416538 CAMLGP49069 296 aa10.66□□□□□ -0.7
UBXN4-203ENST00000416538 BCAP31P51572 246 aa10.66□□□□□ -0.7
UBXN4-203ENST00000416538 S100A10P60903 97 aa10.66□□□□□ -0.7
UBXN4-203ENST00000416538 FCN2Q15485 313 aa10.66□□□□□ -0.7
UBXN4-203ENST00000416538 TMEM88Q6PEY1 159 aa10.66□□□□□ -0.7
UBXN4-203ENST00000416538 LCN15Q6UWW0 184 aa10.66□□□□□ -0.7
UBXN4-203ENST00000416538 S100ZQ8WXG8 99 aa10.66□□□□□ -0.7
UBXN4-203ENST00000416538 LYRM2Q9NU23 88 aaPredicted RBP10.66□□□□□ -0.7
UBXN4-203ENST00000416538 M0R2N4 97 aa10.65□□□□□ -0.7
UBXN4-203ENST00000416538 RTL8CO15255 209 aa10.65□□□□□ -0.7
UBXN4-203ENST00000416538 DAD1P61803 113 aa10.65□□□□□ -0.7
UBXN4-203ENST00000416538 IFITM3Q01628 133 aa10.65□□□□□ -0.7
UBXN4-203ENST00000416538 ASAH1Q13510 395 aa10.65□□□□□ -0.7
UBXN4-203ENST00000416538 C10orf113Q5VZT2 155 aa10.65□□□□□ -0.7
UBXN4-203ENST00000416538 TMEM252Q8N6L7 170 aa10.65□□□□□ -0.7
UBXN4-203ENST00000416538 SAT2Q96F10 170 aaPredicted RBP10.65□□□□□ -0.7
UBXN4-203ENST00000416538 SLC50A1Q9BRV3 221 aa10.65□□□□□ -0.7
UBXN4-203ENST00000416538 UQCC1Q9NVA1 299 aa10.65□□□□□ -0.7
UBXN4-203ENST00000416538 FAM240BA0A1B0GVZ2 78 aa10.64□□□□□ -0.71
UBXN4-203ENST00000416538 TSPOP30536 169 aa10.64□□□□□ -0.71
UBXN4-203ENST00000416538 RHOBP62745 196 aa10.64□□□□□ -0.71
UBXN4-203ENST00000416538 MZT2BQ6NZ67 158 aa10.64□□□□□ -0.71
UBXN4-203ENST00000416538 BPIFA4PQ86YQ2 179 aa10.64□□□□□ -0.71
UBXN4-203ENST00000416538 LRRC20Q8TCA0 184 aa10.64□□□□□ -0.71
UBXN4-203ENST00000416538 FAM210BQ96KR6 192 aa10.64□□□□□ -0.71
UBXN4-203ENST00000416538 KIAA1109Q2LD37 5005 aa10.64□□□□□ -0.71
UBXN4-203ENST00000416538 IGLV2-18A0A075B6J9 118 aa10.63□□□□□ -0.71
UBXN4-203ENST00000416538 A6NJY4 79 aa10.63□□□□□ -0.71
UBXN4-203ENST00000416538 SIX6O95475 246 aa10.63□□□□□ -0.71
UBXN4-203ENST00000416538 SULT1A1P50225 295 aa10.63□□□□□ -0.71
UBXN4-203ENST00000416538 Q6ZR54 194 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms