RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 PRADC1Q9BSG0 188 aa0.6□□□□□ -2.31
ATG4C-204ENST00000414558 TMEM126AQ9H061 195 aa0.6□□□□□ -2.31
ATG4C-204ENST00000414558 SPANXCQ9NY87 97 aa0.6□□□□□ -2.31
ATG4C-204ENST00000414558 MED11Q9P086 117 aa0.6□□□□□ -2.31
ATG4C-204ENST00000414558 OR52A1Q9UKL2 312 aa0.6□□□□□ -2.31
ATG4C-204ENST00000414558 GINS2Q9Y248 185 aa0.6□□□□□ -2.31
ATG4C-204ENST00000414558 LAMTOR2Q9Y2Q5 125 aa0.6□□□□□ -2.31
ATG4C-204ENST00000414558 NUBP2Q9Y5Y2 271 aa0.6□□□□□ -2.31
ATG4C-204ENST00000414558 KDM6AO15550 1401 aaPredicted RBP0.6□□□□□ -2.31
ATG4C-204ENST00000414558 TRAPPC8Q9Y2L5 1435 aa0.6□□□□□ -2.31
ATG4C-204ENST00000414558 FER1L6Q2WGJ9 1857 aa0.6□□□□□ -2.31
ATG4C-204ENST00000414558 PLXNA4Q9HCM2 1894 aa0.6□□□□□ -2.31
ATG4C-204ENST00000414558 ARAP1Q96P48 1450 aa0.6□□□□□ -2.31
ATG4C-204ENST00000414558 TNRC6AQ8NDV7 1962 aaKnown RBP0.59□□□□□ -2.31
ATG4C-204ENST00000414558 SCN8AQ9UQD0 1980 aa0.59□□□□□ -2.31
ATG4C-204ENST00000414558 MYO5AQ9Y4I1 1855 aaKnown RBP0.59□□□□□ -2.31
ATG4C-204ENST00000414558 FRMPD1Q5SYB0 1578 aa0.59□□□□□ -2.31
ATG4C-204ENST00000414558 TNS3Q68CZ2 1445 aa0.59□□□□□ -2.31
ATG4C-204ENST00000414558 KIAA1107Q9UPP5 1409 aa0.59□□□□□ -2.31
ATG4C-204ENST00000414558 TRDV1A0A1B0GX56 115 aa0.59□□□□□ -2.31
ATG4C-204ENST00000414558 ARL5CA6NH57 179 aa0.59□□□□□ -2.31
ATG4C-204ENST00000414558 ZNF736B4DX44 427 aaPredicted RBP0.59□□□□□ -2.31
ATG4C-204ENST00000414558 HIST1H2BKO60814 126 aa0.59□□□□□ -2.31
ATG4C-204ENST00000414558 CST7O76096 145 aa0.59□□□□□ -2.31
ATG4C-204ENST00000414558 GADD45GO95257 159 aa0.59□□□□□ -2.31
ATG4C-204ENST00000414558 DHFRP00374 187 aa0.59□□□□□ -2.31
ATG4C-204ENST00000414558 HIST1H2BJP06899 126 aa0.59□□□□□ -2.31
ATG4C-204ENST00000414558 BCL2P10415 239 aa0.59□□□□□ -2.31
ATG4C-204ENST00000414558 SCGB1A1P11684 91 aa0.59□□□□□ -2.31
ATG4C-204ENST00000414558 HLA-EP13747 358 aa0.59□□□□□ -2.31
ATG4C-204ENST00000414558 RPL35P42766 123 aaKnown RBP0.59□□□□□ -2.31
ATG4C-204ENST00000414558 ALX1Q15699 326 aa0.59□□□□□ -2.31
ATG4C-204ENST00000414558 LTC4SQ16873 150 aa0.59□□□□□ -2.31
ATG4C-204ENST00000414558 RTL8BQ17RB0 113 aa0.59□□□□□ -2.31
ATG4C-204ENST00000414558 MPV17LQ2QL34 196 aa0.59□□□□□ -2.31
ATG4C-204ENST00000414558 TMEM128Q5BJH2 165 aa0.59□□□□□ -2.31
ATG4C-204ENST00000414558 EIF5AL1Q6IS14 154 aaKnown RBP0.59□□□□□ -2.31
ATG4C-204ENST00000414558 PDZD9Q8IXQ8 264 aa0.59□□□□□ -2.31
ATG4C-204ENST00000414558 OR5D16Q8NGK9 328 aa0.59□□□□□ -2.31
ATG4C-204ENST00000414558 GRPEL2Q8TAA5 225 aa0.59□□□□□ -2.31
ATG4C-204ENST00000414558 THEM6Q8WUY1 208 aa0.59□□□□□ -2.31
ATG4C-204ENST00000414558 BORCS8Q96FH0 119 aa0.59□□□□□ -2.31
ATG4C-204ENST00000414558 RMND5BQ96G75 393 aaPredicted RBP0.59□□□□□ -2.31
ATG4C-204ENST00000414558 MCEEQ96PE7 176 aa0.59□□□□□ -2.31
ATG4C-204ENST00000414558 AIF1LQ9BQI0 150 aa0.59□□□□□ -2.31
ATG4C-204ENST00000414558 EFCAB11Q9BUY7 163 aa0.59□□□□□ -2.31
ATG4C-204ENST00000414558 NPCDR1Q9BY65 106 aa0.59□□□□□ -2.31
ATG4C-204ENST00000414558 OR2H1Q9GZK4 316 aa0.59□□□□□ -2.31
ATG4C-204ENST00000414558 C6orf62Q9GZU0 229 aaPredicted RBP0.59□□□□□ -2.31
ATG4C-204ENST00000414558 TCEAL2Q9H3H9 227 aaPredicted RBP0.59□□□□□ -2.31
ATG4C-204ENST00000414558 LRTM1Q9HBL6 345 aa0.59□□□□□ -2.31
ATG4C-204ENST00000414558 POPDC3Q9HBV1 291 aa0.59□□□□□ -2.31
ATG4C-204ENST00000414558 TCOF1Q13428 1488 aaKnown RBP0.59□□□□□ -2.32
ATG4C-204ENST00000414558 MCM3APO60318 1980 aa0.59□□□□□ -2.32
ATG4C-204ENST00000414558 ARHGEF11O15085 1522 aa0.59□□□□□ -2.32
ATG4C-204ENST00000414558 RTL9Q8NET4 1388 aa0.58□□□□□ -2.32
ATG4C-204ENST00000414558 LAMB4A4D0S4 1761 aa0.58□□□□□ -2.32
ATG4C-204ENST00000414558 BCL9O00512 1426 aa0.58□□□□□ -2.32
ATG4C-204ENST00000414558 BORCS7-ASMTA0A0B4J1R7 106 aa0.58□□□□□ -2.32
ATG4C-204ENST00000414558 CCDC160A6NGH7 325 aa0.58□□□□□ -2.32
ATG4C-204ENST00000414558 C17orf112F2Z3M2 114 aa0.58□□□□□ -2.32
ATG4C-204ENST00000414558 J3KT08 172 aa0.58□□□□□ -2.32
ATG4C-204ENST00000414558 OR10J4P0C629 311 aa0.58□□□□□ -2.32
ATG4C-204ENST00000414558 SRP9P49458 86 aaKnown RBP0.58□□□□□ -2.32
ATG4C-204ENST00000414558 INSL3P51460 131 aa0.58□□□□□ -2.32
ATG4C-204ENST00000414558 POLR2HP52434 150 aaKnown RBP0.58□□□□□ -2.32
ATG4C-204ENST00000414558 GTF2A1P52655 376 aaPredicted RBP0.58□□□□□ -2.32
ATG4C-204ENST00000414558 NDUFA6P56556 154 aa0.58□□□□□ -2.32
ATG4C-204ENST00000414558 HBBP68871 147 aa0.58□□□□□ -2.32
ATG4C-204ENST00000414558 KLRD1Q13241 179 aa0.58□□□□□ -2.32
ATG4C-204ENST00000414558 EIF3IQ13347 325 aaKnown RBP0.58□□□□□ -2.32
ATG4C-204ENST00000414558 TEX261Q6UWH6 196 aa0.58□□□□□ -2.32
ATG4C-204ENST00000414558 PATE2Q6UY27 113 aa0.58□□□□□ -2.32
ATG4C-204ENST00000414558 PHF5AQ7RTV0 110 aaKnown RBP0.58□□□□□ -2.32
ATG4C-204ENST00000414558 Q8IYB0 196 aa0.58□□□□□ -2.32
ATG4C-204ENST00000414558 TMEM35BQ8NCS4 154 aa0.58□□□□□ -2.32
ATG4C-204ENST00000414558 TMEM254Q8TBM7 123 aa0.58□□□□□ -2.32
ATG4C-204ENST00000414558 PATE1Q8WXA2 126 aa0.58□□□□□ -2.32
ATG4C-204ENST00000414558 ZNF714Q96N38 554 aa0.58□□□□□ -2.32
ATG4C-204ENST00000414558 CCDC115Q96NT0 180 aa0.58□□□□□ -2.32
ATG4C-204ENST00000414558 CACYBPQ9HB71 228 aaKnown RBP0.58□□□□□ -2.32
ATG4C-204ENST00000414558 BATF3Q9NR55 127 aa0.58□□□□□ -2.32
ATG4C-204ENST00000414558 MED31Q9Y3C7 131 aa0.58□□□□□ -2.32
ATG4C-204ENST00000414558 ASB4Q9Y574 426 aa0.58□□□□□ -2.32
ATG4C-204ENST00000414558 CHCHD2Q9Y6H1 151 aaPredicted RBP0.58□□□□□ -2.32
ATG4C-204ENST00000414558 LY96Q9Y6Y9 160 aa0.58□□□□□ -2.32
ATG4C-204ENST00000414558 U3KQ87 197 aa0.58□□□□□ -2.32
ATG4C-204ENST00000414558 FANCMQ8IYD8 2048 aa0.58□□□□□ -2.32
ATG4C-204ENST00000414558 NCOA6Q14686 2063 aaPredicted RBP0.58□□□□□ -2.32
ATG4C-204ENST00000414558 COL24A1Q17RW2 1714 aa0.58□□□□□ -2.32
ATG4C-204ENST00000414558 PEAK1Q9H792 1746 aa0.58□□□□□ -2.32
ATG4C-204ENST00000414558 OVOS2A0A0G2JMS6 1433 aa0.57□□□□□ -2.32
ATG4C-204ENST00000414558 USP54Q70EL1 1684 aa0.57□□□□□ -2.32
ATG4C-204ENST00000414558 A2MP01023 1474 aa0.57□□□□□ -2.32
ATG4C-204ENST00000414558 ZCCHC6Q5VYS8 1495 aaKnown RBP0.57□□□□□ -2.32
ATG4C-204ENST00000414558 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.57□□□□□ -2.32
ATG4C-204ENST00000414558 IGHV1-58A0A0C4DH39 117 aa0.57□□□□□ -2.32
ATG4C-204ENST00000414558 TRBV7-6A0A0J9YX20 115 aa0.57□□□□□ -2.32
ATG4C-204ENST00000414558 A0A1B0GX51 115 aa0.57□□□□□ -2.32
ATG4C-204ENST00000414558 ODAMA1E959 279 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms