RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 PET100P0DJ07 73 aa8.1□□□□□ -1.11
RFFL-204ENST00000414419 CXCL2P19875 107 aa8.1□□□□□ -1.11
RFFL-204ENST00000414419 CXCL3P19876 107 aa8.1□□□□□ -1.11
RFFL-204ENST00000414419 RPL29P47914 159 aaKnown RBP8.1□□□□□ -1.11
RFFL-204ENST00000414419 CNN1P51911 297 aaKnown RBP8.1□□□□□ -1.11
RFFL-204ENST00000414419 RHOBP62745 196 aa8.1□□□□□ -1.11
RFFL-204ENST00000414419 PRR20EP86478 221 aa8.1□□□□□ -1.11
RFFL-204ENST00000414419 PRR20CP86479 221 aa8.1□□□□□ -1.11
RFFL-204ENST00000414419 PRR20DP86480 221 aa8.1□□□□□ -1.11
RFFL-204ENST00000414419 PRR20BP86481 221 aa8.1□□□□□ -1.11
RFFL-204ENST00000414419 PRR20AP86496 221 aa8.1□□□□□ -1.11
RFFL-204ENST00000414419 NHLH2Q02577 135 aa8.1□□□□□ -1.11
RFFL-204ENST00000414419 PSG3Q16557 428 aa8.1□□□□□ -1.11
RFFL-204ENST00000414419 ZNF705AQ6ZN79 300 aaPredicted RBP8.1□□□□□ -1.11
RFFL-204ENST00000414419 ZNF709Q8N972 641 aa8.1□□□□□ -1.11
RFFL-204ENST00000414419 OR5C1Q8NGR4 320 aa8.1□□□□□ -1.11
RFFL-204ENST00000414419 C2CD4CQ8TF44 421 aa8.1□□□□□ -1.11
RFFL-204ENST00000414419 PPP1R1CQ8WVI7 109 aa8.1□□□□□ -1.11
RFFL-204ENST00000414419 NEU1Q99519 415 aa8.1□□□□□ -1.11
RFFL-204ENST00000414419 SLC39A9Q9NUM3 307 aa8.1□□□□□ -1.11
RFFL-204ENST00000414419 OR5AC2Q9NZP5 309 aa8.1□□□□□ -1.11
RFFL-204ENST00000414419 PXMP4Q9Y6I8 212 aa8.1□□□□□ -1.11
RFFL-204ENST00000414419 DYNC2H1Q8NCM8 4307 aaKnown RBP8.09□□□□□ -1.11
RFFL-204ENST00000414419 TMEM189A5PLL7 270 aa8.09□□□□□ -1.11
RFFL-204ENST00000414419 MRPS12O15235 138 aaKnown RBP8.09□□□□□ -1.11
RFFL-204ENST00000414419 HBE1P02100 147 aa8.09□□□□□ -1.11
RFFL-204ENST00000414419 SNRPCP09234 159 aaKnown RBP8.09□□□□□ -1.11
RFFL-204ENST00000414419 ZNF705DP0CH99 300 aaPredicted RBP8.09□□□□□ -1.11
RFFL-204ENST00000414419 ZNF705BP0CI00 300 aaPredicted RBP8.09□□□□□ -1.11
RFFL-204ENST00000414419 HLA-DMBP28068 263 aa8.09□□□□□ -1.11
RFFL-204ENST00000414419 EMP1P54849 157 aa8.09□□□□□ -1.11
RFFL-204ENST00000414419 HIST1H1AQ02539 215 aaPredicted RBP8.09□□□□□ -1.11
RFFL-204ENST00000414419 OPCMLQ14982 345 aa8.09□□□□□ -1.11
RFFL-204ENST00000414419 CHAC2Q8WUX2 184 aa8.09□□□□□ -1.11
RFFL-204ENST00000414419 LINC00476Q8WZB0 136 aa8.09□□□□□ -1.11
RFFL-204ENST00000414419 TRAV10A0A0B4J240 114 aa8.08□□□□□ -1.12
RFFL-204ENST00000414419 ZNF705FA8MVS1 300 aaPredicted RBP8.08□□□□□ -1.12
RFFL-204ENST00000414419 H2BFSP57053 126 aa8.08□□□□□ -1.12
RFFL-204ENST00000414419 CLINT1Q14677 625 aa8.08□□□□□ -1.12
RFFL-204ENST00000414419 GUK1Q16774 197 aa8.08□□□□□ -1.12
RFFL-204ENST00000414419 SPINK13Q1W4C9 94 aa8.08□□□□□ -1.12
RFFL-204ENST00000414419 MORN5Q5VZ52 161 aa8.08□□□□□ -1.12
RFFL-204ENST00000414419 OR11H7Q8NGC8 314 aa8.08□□□□□ -1.12
RFFL-204ENST00000414419 OR8A1Q8NGG7 326 aa8.08□□□□□ -1.12
RFFL-204ENST00000414419 THAP6Q8TBB0 222 aa8.08□□□□□ -1.12
RFFL-204ENST00000414419 RPUSD4Q96CM3 377 aaKnown RBP8.08□□□□□ -1.12
RFFL-204ENST00000414419 IGF2BP2-AS1Q96M15 143 aa8.08□□□□□ -1.12
RFFL-204ENST00000414419 NPCDR1Q9BY65 106 aa8.08□□□□□ -1.12
RFFL-204ENST00000414419 ZNF331Q9NQX6 463 aaPredicted RBP8.08□□□□□ -1.12
RFFL-204ENST00000414419 KCNIP2Q9NS61 270 aa8.08□□□□□ -1.12
RFFL-204ENST00000414419 RFNGQ9Y644 331 aa8.08□□□□□ -1.12
RFFL-204ENST00000414419 TRAV5A0A0B4J249 113 aa8.07□□□□□ -1.12
RFFL-204ENST00000414419 A8MTW9 85 aa8.07□□□□□ -1.12
RFFL-204ENST00000414419 IGLL5B9A064 214 aa8.07□□□□□ -1.12
RFFL-204ENST00000414419 C17orf112F2Z3M2 114 aa8.07□□□□□ -1.12
RFFL-204ENST00000414419 H0YIZ8 118 aa8.07□□□□□ -1.12
RFFL-204ENST00000414419 H3BTX0 84 aa8.07□□□□□ -1.12
RFFL-204ENST00000414419 BOLA2-SMG1P6H3BVE0 249 aa8.07□□□□□ -1.12
RFFL-204ENST00000414419 M0R2Z0 102 aa8.07□□□□□ -1.12
RFFL-204ENST00000414419 MPC2O95563 127 aa8.07□□□□□ -1.12
RFFL-204ENST00000414419 INSP01308 110 aa8.07□□□□□ -1.12
RFFL-204ENST00000414419 SPART-AS1P0CW21 52 aa8.07□□□□□ -1.12
RFFL-204ENST00000414419 TCTAP57738 103 aa8.07□□□□□ -1.12
RFFL-204ENST00000414419 RRN3P1Q2M238 152 aa8.07□□□□□ -1.12
RFFL-204ENST00000414419 AMTNQ6UX39 209 aa8.07□□□□□ -1.12
RFFL-204ENST00000414419 Q6ZTC4 211 aa8.07□□□□□ -1.12
RFFL-204ENST00000414419 RYR3Q15413 4870 aa8.06□□□□□ -1.12
RFFL-204ENST00000414419 TEX48A0A1B0GUV7 120 aa8.06□□□□□ -1.12
RFFL-204ENST00000414419 LOC102723971A0A1B0GUV8 181 aa8.06□□□□□ -1.12
RFFL-204ENST00000414419 PTTG1O95997 202 aa8.06□□□□□ -1.12
RFFL-204ENST00000414419 IGLC2P0DOY2 106 aa8.06□□□□□ -1.12
RFFL-204ENST00000414419 ZNF767PQ75MW2 155 aa8.06□□□□□ -1.12
RFFL-204ENST00000414419 C1orf158Q8N1D5 194 aa8.06□□□□□ -1.12
RFFL-204ENST00000414419 OR10J6PQ8NGY7 276 aa8.06□□□□□ -1.12
RFFL-204ENST00000414419 RNF126Q9BV68 326 aa8.06□□□□□ -1.12
RFFL-204ENST00000414419 CELA1Q9UNI1 258 aa8.06□□□□□ -1.12
RFFL-204ENST00000414419 TIMM9Q9Y5J7 89 aa8.06□□□□□ -1.12
RFFL-204ENST00000414419 LYSTQ99698 3801 aa8.06□□□□□ -1.12
RFFL-204ENST00000414419 TRAV12-2A0A075B6T6 113 aa8.05□□□□□ -1.12
RFFL-204ENST00000414419 DEFB131BA0A096LNP1 70 aa8.05□□□□□ -1.12
RFFL-204ENST00000414419 H3BQ15 152 aa8.05□□□□□ -1.12
RFFL-204ENST00000414419 SLC17A3O00476 420 aa8.05□□□□□ -1.12
RFFL-204ENST00000414419 IFNA5P01569 189 aa8.05□□□□□ -1.12
RFFL-204ENST00000414419 RPL12P30050 165 aaKnown RBP8.05□□□□□ -1.12
RFFL-204ENST00000414419 C12orf74Q32Q52 190 aa8.05□□□□□ -1.12
RFFL-204ENST00000414419 BAP18Q8IXM2 172 aa8.05□□□□□ -1.12
RFFL-204ENST00000414419 SCGB1C1Q8TD33 95 aa8.05□□□□□ -1.12
RFFL-204ENST00000414419 ATP5SQ99766 215 aa8.05□□□□□ -1.12
RFFL-204ENST00000414419 WDR61Q9GZS3 305 aaKnown RBP8.05□□□□□ -1.12
RFFL-204ENST00000414419 MBD2Q9UBB5 411 aa8.05□□□□□ -1.12
RFFL-204ENST00000414419 HSPB11Q9Y547 144 aa8.05□□□□□ -1.12
RFFL-204ENST00000414419 ALG5Q9Y673 324 aa8.05□□□□□ -1.12
RFFL-204ENST00000414419 SACSQ9NZJ4 4579 aa8.05□□□□□ -1.12
RFFL-204ENST00000414419 PRB4P10163 310 aaPredicted RBP8.04□□□□□ -1.12
RFFL-204ENST00000414419 HIST1H1EP10412 219 aaKnown RBP8.04□□□□□ -1.12
RFFL-204ENST00000414419 TSPOP30536 169 aa8.04□□□□□ -1.12
RFFL-204ENST00000414419 CDKN1BP46527 198 aa8.04□□□□□ -1.12
RFFL-204ENST00000414419 GCSAMLQ5JQS6 135 aa8.04□□□□□ -1.12
RFFL-204ENST00000414419 FAM222AQ5U5X8 452 aa8.04□□□□□ -1.12
RFFL-204ENST00000414419 LGALS9CQ6DKI2 356 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 801.3 ms