RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 FOXI2Q6ZQN5 318 aa12.14□□□□□ -0.47
LINC00398-201ENST00000414407 MIR17HGQ75NE6 70 aa12.14□□□□□ -0.47
LINC00398-201ENST00000414407 TRPT1Q86TN4 253 aaKnown RBP12.14□□□□□ -0.47
LINC00398-201ENST00000414407 SAT2Q96F10 170 aaPredicted RBP12.14□□□□□ -0.47
LINC00398-201ENST00000414407 FAM167A-AS1Q96KT0 104 aa12.14□□□□□ -0.47
LINC00398-201ENST00000414407 ARPC5LQ9BPX5 153 aa12.14□□□□□ -0.47
LINC00398-201ENST00000414407 CSTL1Q9H114 145 aa12.14□□□□□ -0.47
LINC00398-201ENST00000414407 ZNF331Q9NQX6 463 aaPredicted RBP12.14□□□□□ -0.47
LINC00398-201ENST00000414407 RFNGQ9Y644 331 aa12.14□□□□□ -0.47
LINC00398-201ENST00000414407 DNAH9Q9NYC9 4486 aa12.13□□□□□ -0.47
LINC00398-201ENST00000414407 KNCNA6PVL3 124 aa12.13□□□□□ -0.47
LINC00398-201ENST00000414407 H3BMM0 161 aa12.13□□□□□ -0.47
LINC00398-201ENST00000414407 H3BQ15 152 aa12.13□□□□□ -0.47
LINC00398-201ENST00000414407 C1QBP02746 253 aa12.13□□□□□ -0.47
LINC00398-201ENST00000414407 HLA-DRB4P13762 266 aa12.13□□□□□ -0.47
LINC00398-201ENST00000414407 RPL35AP18077 110 aaKnown RBP12.13□□□□□ -0.47
LINC00398-201ENST00000414407 TAS2R45P59539 299 aa12.13□□□□□ -0.47
LINC00398-201ENST00000414407 PDE6HQ13956 83 aa12.13□□□□□ -0.47
LINC00398-201ENST00000414407 Q6ZWC4 215 aa12.13□□□□□ -0.47
LINC00398-201ENST00000414407 C20orf173Q96LM9 149 aa12.13□□□□□ -0.47
LINC00398-201ENST00000414407 CLUHP3Q96NS8 147 aa12.13□□□□□ -0.47
LINC00398-201ENST00000414407 SAV1Q9H4B6 383 aaPredicted RBP12.13□□□□□ -0.47
LINC00398-201ENST00000414407 HLA-DRB4X5D2U9 266 aa12.13□□□□□ -0.47
LINC00398-201ENST00000414407 TRBV19A0A075B6N1 114 aa12.12□□□□□ -0.47
LINC00398-201ENST00000414407 A0A1W2PPV4 95 aa12.12□□□□□ -0.47
LINC00398-201ENST00000414407 SPP1P10451 314 aa12.12□□□□□ -0.47
LINC00398-201ENST00000414407 KHDC3LQ587J8 217 aa12.12□□□□□ -0.47
LINC00398-201ENST00000414407 MORN3Q6PF18 240 aaPredicted RBP12.12□□□□□ -0.47
LINC00398-201ENST00000414407 OR10G4Q8NGN3 311 aa12.12□□□□□ -0.47
LINC00398-201ENST00000414407 OR10G9Q8NGN4 311 aa12.12□□□□□ -0.47
LINC00398-201ENST00000414407 OR10G7Q8NGN6 311 aa12.12□□□□□ -0.47
LINC00398-201ENST00000414407 HYLS1Q96M11 299 aa12.12□□□□□ -0.47
LINC00398-201ENST00000414407 OR51M1Q9H341 326 aa12.12□□□□□ -0.47
LINC00398-201ENST00000414407 ZNF586Q9NXT0 402 aa12.12□□□□□ -0.47
LINC00398-201ENST00000414407 TGP01266 2768 aa12.12□□□□□ -0.47
LINC00398-201ENST00000414407 KANTRA0A1W2PQU2 76 aa12.11□□□□□ -0.47
LINC00398-201ENST00000414407 BCL2L11O43521 198 aa12.11□□□□□ -0.47
LINC00398-201ENST00000414407 RAB2AP61019 212 aa12.11□□□□□ -0.47
LINC00398-201ENST00000414407 PSG3Q16557 428 aa12.11□□□□□ -0.47
LINC00398-201ENST00000414407 TMEM41BQ5BJD5 291 aa12.11□□□□□ -0.47
LINC00398-201ENST00000414407 EBLN2Q6P2I7 272 aa12.11□□□□□ -0.47
LINC00398-201ENST00000414407 PAXXQ9BUH6 204 aa12.11□□□□□ -0.47
LINC00398-201ENST00000414407 SH3BGRL3Q9H299 93 aa12.11□□□□□ -0.47
LINC00398-201ENST00000414407 TP53TG1Q9Y2A0 90 aa12.11□□□□□ -0.47
LINC00398-201ENST00000414407 U3KQK5 164 aa12.11□□□□□ -0.47
LINC00398-201ENST00000414407 COL7A1Q02388 2944 aa12.1□□□□□ -0.47
LINC00398-201ENST00000414407 A0A0J9YX75 114 aa12.1□□□□□ -0.47
LINC00398-201ENST00000414407 A0A1B0GVG6 124 aa12.1□□□□□ -0.47
LINC00398-201ENST00000414407 PYYP10082 97 aa12.1□□□□□ -0.47
LINC00398-201ENST00000414407 NUTF2P61970 127 aaKnown RBP12.1□□□□□ -0.47
LINC00398-201ENST00000414407 EIF5AP63241 154 aaKnown RBP12.1□□□□□ -0.47
LINC00398-201ENST00000414407 PSG9Q00887 426 aa12.1□□□□□ -0.47
LINC00398-201ENST00000414407 IGFL4Q6B9Z1 124 aa12.1□□□□□ -0.47
LINC00398-201ENST00000414407 PQLC2Q6ZP29 291 aa12.1□□□□□ -0.47
LINC00398-201ENST00000414407 RPP25LQ8N5L8 163 aaKnown RBP12.1□□□□□ -0.47
LINC00398-201ENST00000414407 RNF182Q8N6D2 247 aa12.1□□□□□ -0.47
LINC00398-201ENST00000414407 RNF141Q8WVD5 230 aa12.1□□□□□ -0.47
LINC00398-201ENST00000414407 A8MTW9 85 aa12.09□□□□□ -0.47
LINC00398-201ENST00000414407 SLC17A3O00476 420 aa12.09□□□□□ -0.47
LINC00398-201ENST00000414407 OR7C2O60412 319 aa12.09□□□□□ -0.47
LINC00398-201ENST00000414407 SNRPCP09234 159 aaKnown RBP12.09□□□□□ -0.47
LINC00398-201ENST00000414407 NBEAP1P0C6P0 100 aa12.09□□□□□ -0.47
LINC00398-201ENST00000414407 GDF5OSQ5U4N7 250 aa12.09□□□□□ -0.47
LINC00398-201ENST00000414407 TMUB2Q71RG4 321 aa12.09□□□□□ -0.47
LINC00398-201ENST00000414407 ZNF738Q8NE65 137 aa12.09□□□□□ -0.47
LINC00398-201ENST00000414407 FXYD5Q96DB9 178 aa12.09□□□□□ -0.47
LINC00398-201ENST00000414407 MRPL53Q96EL3 112 aaKnown RBP12.09□□□□□ -0.47
LINC00398-201ENST00000414407 ZNF503Q96F45 646 aa12.09□□□□□ -0.47
LINC00398-201ENST00000414407 RCHY1Q96PM5 261 aa12.09□□□□□ -0.47
LINC00398-201ENST00000414407 H3BTX0 84 aa12.08□□□□□ -0.48
LINC00398-201ENST00000414407 PFDN1O60925 122 aa12.08□□□□□ -0.48
LINC00398-201ENST00000414407 DUSP14O95147 198 aaKnown RBP12.08□□□□□ -0.48
LINC00398-201ENST00000414407 NDUFB4O95168 129 aa12.08□□□□□ -0.48
LINC00398-201ENST00000414407 CDC34P49427 236 aaPredicted RBP12.08□□□□□ -0.48
LINC00398-201ENST00000414407 DEFB1P60022 68 aa12.08□□□□□ -0.48
LINC00398-201ENST00000414407 FAM122CQ6P4D5 195 aa12.08□□□□□ -0.48
LINC00398-201ENST00000414407 ACTR3CQ9C0K3 210 aaPredicted RBP12.08□□□□□ -0.48
LINC00398-201ENST00000414407 PRELID1Q9Y255 219 aa12.08□□□□□ -0.48
LINC00398-201ENST00000414407 F6UB75 175 aa12.07□□□□□ -0.48
LINC00398-201ENST00000414407 CA1P00915 261 aaPredicted RBP12.07□□□□□ -0.48
LINC00398-201ENST00000414407 SEC11BP0C7V7 166 aa12.07□□□□□ -0.48
LINC00398-201ENST00000414407 HLA-DMBP28068 263 aa12.07□□□□□ -0.48
LINC00398-201ENST00000414407 UBE2L3P68036 154 aaKnown RBP12.07□□□□□ -0.48
LINC00398-201ENST00000414407 LGALSLQ3ZCW2 172 aaPredicted RBP12.07□□□□□ -0.48
LINC00398-201ENST00000414407 LYPD1Q8N2G4 141 aa12.07□□□□□ -0.48
LINC00398-201ENST00000414407 BLNKQ8WV28 456 aa12.07□□□□□ -0.48
LINC00398-201ENST00000414407 RAB24Q969Q5 203 aa12.07□□□□□ -0.48
LINC00398-201ENST00000414407 RPUSD4Q96CM3 377 aaKnown RBP12.07□□□□□ -0.48
LINC00398-201ENST00000414407 RNF183Q96D59 192 aa12.07□□□□□ -0.48
LINC00398-201ENST00000414407 OVOL2Q9BRP0 275 aa12.07□□□□□ -0.48
LINC00398-201ENST00000414407 ZNF471Q9BX82 626 aaPredicted RBP12.07□□□□□ -0.48
LINC00398-201ENST00000414407 C1QTNF4Q9BXJ3 329 aa12.07□□□□□ -0.48
LINC00398-201ENST00000414407 SPRY2O43597 315 aa12.06□□□□□ -0.48
LINC00398-201ENST00000414407 GIG44P09565 113 aaPredicted RBP12.06□□□□□ -0.48
LINC00398-201ENST00000414407 OR10J4P0C629 311 aa12.06□□□□□ -0.48
LINC00398-201ENST00000414407 STAG3L2P0CL84 134 aa12.06□□□□□ -0.48
LINC00398-201ENST00000414407 STAG3L3P0CL85 134 aa12.06□□□□□ -0.48
LINC00398-201ENST00000414407 DEFB135Q30KP9 77 aa12.06□□□□□ -0.48
LINC00398-201ENST00000414407 AKR1C8PQ5T2L2 129 aa12.06□□□□□ -0.48
LINC00398-201ENST00000414407 BAP18Q8IXM2 172 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms