RNA–Protein interactions for RNA: ENST00000413517.1

HERPUD2-203, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-203ENST00000413517 LINC00052Q96N35 136 aa6.18□□□□□ -1.42
HERPUD2-203ENST00000413517 SHANK2-AS3Q9BTD1 123 aa6.18□□□□□ -1.42
HERPUD2-203ENST00000413517 SLC25A39Q9BZJ4 359 aaPredicted RBP6.18□□□□□ -1.42
HERPUD2-203ENST00000413517 C11orf68Q9H3H3 251 aaKnown RBP6.18□□□□□ -1.42
HERPUD2-203ENST00000413517 HLA-DRB4X5D2U9 266 aa6.18□□□□□ -1.42
HERPUD2-203ENST00000413517 ALMS1Q8TCU4 4167 aa6.18□□□□□ -1.42
HERPUD2-203ENST00000413517 SACSQ9NZJ4 4579 aa6.17□□□□□ -1.42
HERPUD2-203ENST00000413517 IGHV4-28A0A0C4DH34 117 aa6.17□□□□□ -1.42
HERPUD2-203ENST00000413517 CXorf65A6NEN9 183 aa6.17□□□□□ -1.42
HERPUD2-203ENST00000413517 ZNF705EA8MWA4 302 aaPredicted RBP6.17□□□□□ -1.42
HERPUD2-203ENST00000413517 L7N2F9 121 aa6.17□□□□□ -1.42
HERPUD2-203ENST00000413517 ISLRO14498 428 aa6.17□□□□□ -1.42
HERPUD2-203ENST00000413517 MRPS12O15235 138 aaKnown RBP6.17□□□□□ -1.42
HERPUD2-203ENST00000413517 DEDDO75618 318 aa6.17□□□□□ -1.42
HERPUD2-203ENST00000413517 IGKV3-20P01619 116 aa6.17□□□□□ -1.42
HERPUD2-203ENST00000413517 NPSP0C0P6 89 aa6.17□□□□□ -1.42
HERPUD2-203ENST00000413517 OR5G3P0C626 314 aa6.17□□□□□ -1.42
HERPUD2-203ENST00000413517 PRB4P10163 310 aaPredicted RBP6.17□□□□□ -1.42
HERPUD2-203ENST00000413517 HLA-DMBP28068 263 aa6.17□□□□□ -1.42
HERPUD2-203ENST00000413517 FXYD7P58549 80 aa6.17□□□□□ -1.42
HERPUD2-203ENST00000413517 NANOS2P60321 138 aaKnown RBP6.17□□□□□ -1.42
HERPUD2-203ENST00000413517 S100A10P60903 97 aa6.17□□□□□ -1.42
HERPUD2-203ENST00000413517 MORN3Q6PF18 240 aaPredicted RBP6.17□□□□□ -1.42
HERPUD2-203ENST00000413517 RNF182Q8N6D2 247 aa6.17□□□□□ -1.42
HERPUD2-203ENST00000413517 TMEM217Q8N7C4 229 aa6.17□□□□□ -1.42
HERPUD2-203ENST00000413517 ZNF709Q8N972 641 aa6.17□□□□□ -1.42
HERPUD2-203ENST00000413517 ENKURQ8TC29 256 aa6.17□□□□□ -1.42
HERPUD2-203ENST00000413517 RSG1Q9BU20 258 aa6.17□□□□□ -1.42
HERPUD2-203ENST00000413517 TMEM147Q9BVK8 224 aa6.17□□□□□ -1.42
HERPUD2-203ENST00000413517 ARL6Q9H0F7 186 aa6.17□□□□□ -1.42
HERPUD2-203ENST00000413517 SLC35B3Q9H1N7 401 aa6.17□□□□□ -1.42
HERPUD2-203ENST00000413517 SAV1Q9H4B6 383 aaPredicted RBP6.17□□□□□ -1.42
HERPUD2-203ENST00000413517 NPVFQ9HCQ7 196 aa6.17□□□□□ -1.42
HERPUD2-203ENST00000413517 XCL2Q9UBD3 114 aa6.17□□□□□ -1.42
HERPUD2-203ENST00000413517 HIGD1AQ9Y241 93 aa6.17□□□□□ -1.42
HERPUD2-203ENST00000413517 A0A0A0MQY5 61 aa6.16□□□□□ -1.42
HERPUD2-203ENST00000413517 A0A0J9YX75 114 aa6.16□□□□□ -1.42
HERPUD2-203ENST00000413517 A8MTW9 85 aa6.16□□□□□ -1.42
HERPUD2-203ENST00000413517 INMT-MINDY4F8WBC2 141 aa6.16□□□□□ -1.42
HERPUD2-203ENST00000413517 H0YIZ8 118 aa6.16□□□□□ -1.42
HERPUD2-203ENST00000413517 GOSR2O14653 212 aa6.16□□□□□ -1.42
HERPUD2-203ENST00000413517 HYPMO75409 117 aa6.16□□□□□ -1.42
HERPUD2-203ENST00000413517 GALR1P47211 349 aa6.16□□□□□ -1.42
HERPUD2-203ENST00000413517 CAV2P51636 162 aa6.16□□□□□ -1.42
HERPUD2-203ENST00000413517 SELENOTP62341 195 aa6.16□□□□□ -1.42
HERPUD2-203ENST00000413517 VWC2Q2TAL6 325 aa6.16□□□□□ -1.42
HERPUD2-203ENST00000413517 FOXI2Q6ZQN5 318 aa6.16□□□□□ -1.42
HERPUD2-203ENST00000413517 TMEM252Q8N6L7 170 aa6.16□□□□□ -1.42
HERPUD2-203ENST00000413517 TMEM37Q8WXS4 190 aa6.16□□□□□ -1.42
HERPUD2-203ENST00000413517 MARVELD1Q9BSK0 173 aa6.16□□□□□ -1.42
HERPUD2-203ENST00000413517 GGACTQ9BVM4 153 aa6.16□□□□□ -1.42
HERPUD2-203ENST00000413517 ARV1Q9H2C2 271 aa6.16□□□□□ -1.42
HERPUD2-203ENST00000413517 LYRM2Q9NU23 88 aaPredicted RBP6.16□□□□□ -1.42
HERPUD2-203ENST00000413517 OR5AC2Q9NZP5 309 aa6.16□□□□□ -1.42
HERPUD2-203ENST00000413517 CELA1Q9UNI1 258 aa6.16□□□□□ -1.42
HERPUD2-203ENST00000413517 WDR83OSQ9Y284 106 aa6.16□□□□□ -1.42
HERPUD2-203ENST00000413517 DNAH1Q9P2D7 4330 aa6.16□□□□□ -1.42
HERPUD2-203ENST00000413517 LOC100996750A0A140TA64 210 aa6.15□□□□□ -1.42
HERPUD2-203ENST00000413517 UBE2L5PA0A1B0GUS4 154 aa6.15□□□□□ -1.42
HERPUD2-203ENST00000413517 SNRPCP09234 159 aaKnown RBP6.15□□□□□ -1.42
HERPUD2-203ENST00000413517 ZNF705DP0CH99 300 aaPredicted RBP6.15□□□□□ -1.42
HERPUD2-203ENST00000413517 ZNF705BP0CI00 300 aaPredicted RBP6.15□□□□□ -1.42
HERPUD2-203ENST00000413517 VPREB1P12018 145 aa6.15□□□□□ -1.42
HERPUD2-203ENST00000413517 ID1P41134 155 aa6.15□□□□□ -1.42
HERPUD2-203ENST00000413517 MEOX2P50222 304 aa6.15□□□□□ -1.42
HERPUD2-203ENST00000413517 SULT1A1P50225 295 aa6.15□□□□□ -1.42
HERPUD2-203ENST00000413517 BCAP31P51572 246 aa6.15□□□□□ -1.42
HERPUD2-203ENST00000413517 H2BFSP57053 126 aa6.15□□□□□ -1.42
HERPUD2-203ENST00000413517 FAM78BQ5VT40 261 aa6.15□□□□□ -1.42
HERPUD2-203ENST00000413517 MIC13Q5XKP0 118 aa6.15□□□□□ -1.42
HERPUD2-203ENST00000413517 CEMP1Q6PRD7 247 aaPredicted RBP6.15□□□□□ -1.42
HERPUD2-203ENST00000413517 AMTNQ6UX39 209 aa6.15□□□□□ -1.42
HERPUD2-203ENST00000413517 ZNF546Q86UE3 836 aa6.15□□□□□ -1.42
HERPUD2-203ENST00000413517 PHLDA1Q8WV24 401 aaPredicted RBP6.15□□□□□ -1.42
HERPUD2-203ENST00000413517 KRTAP4-6Q9BYQ5 205 aa6.15□□□□□ -1.42
HERPUD2-203ENST00000413517 RYR2Q92736 4967 aa6.15□□□□□ -1.43
HERPUD2-203ENST00000413517 A0A087X0K7 114 aa6.14□□□□□ -1.43
HERPUD2-203ENST00000413517 NUPR2A6NF83 97 aa6.14□□□□□ -1.43
HERPUD2-203ENST00000413517 ZNF705FA8MVS1 300 aaPredicted RBP6.14□□□□□ -1.43
HERPUD2-203ENST00000413517 H3BTX0 84 aa6.14□□□□□ -1.43
HERPUD2-203ENST00000413517 SLC17A3O00476 420 aa6.14□□□□□ -1.43
HERPUD2-203ENST00000413517 PRAF2O60831 178 aa6.14□□□□□ -1.43
HERPUD2-203ENST00000413517 MIFP14174 115 aa6.14□□□□□ -1.43
HERPUD2-203ENST00000413517 CXCL3P19876 107 aa6.14□□□□□ -1.43
HERPUD2-203ENST00000413517 CAMLGP49069 296 aa6.14□□□□□ -1.43
HERPUD2-203ENST00000413517 FGL1Q08830 312 aa6.14□□□□□ -1.43
HERPUD2-203ENST00000413517 OPCMLQ14982 345 aa6.14□□□□□ -1.43
HERPUD2-203ENST00000413517 LRRC37A5PQ49AS3 106 aa6.14□□□□□ -1.43
HERPUD2-203ENST00000413517 TMEM41BQ5BJD5 291 aa6.14□□□□□ -1.43
HERPUD2-203ENST00000413517 ZNF705AQ6ZN79 300 aaPredicted RBP6.14□□□□□ -1.43
HERPUD2-203ENST00000413517 Q6ZNX1 250 aa6.14□□□□□ -1.43
HERPUD2-203ENST00000413517 OR4B1Q8NGF8 309 aa6.14□□□□□ -1.43
HERPUD2-203ENST00000413517 C11orf45Q8TAV5 145 aa6.14□□□□□ -1.43
HERPUD2-203ENST00000413517 LINC00476Q8WZB0 136 aa6.14□□□□□ -1.43
HERPUD2-203ENST00000413517 GPR82Q96P67 336 aa6.14□□□□□ -1.43
HERPUD2-203ENST00000413517 GPN1Q9HCN4 374 aaPredicted RBP6.14□□□□□ -1.43
HERPUD2-203ENST00000413517 UQCC1Q9NVA1 299 aa6.14□□□□□ -1.43
HERPUD2-203ENST00000413517 TRAV5A0A0B4J249 113 aa6.13□□□□□ -1.43
HERPUD2-203ENST00000413517 H3BQ15 152 aa6.13□□□□□ -1.43
HERPUD2-203ENST00000413517 COX7A2P2O60397 106 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms