RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 MBD6Q96DN6 1003 aa11.18□□□□□ -0.62
CLTCL1-201ENST00000412649 TRAV40A0A0B4J280 105 aa11.18□□□□□ -0.62
CLTCL1-201ENST00000412649 PRSS46E5RG02 174 aa11.18□□□□□ -0.62
CLTCL1-201ENST00000412649 SRRM4A7MD48 611 aaKnown RBP11.17□□□□□ -0.62
CLTCL1-201ENST00000412649 NDUFS7O75251 213 aa11.17□□□□□ -0.62
CLTCL1-201ENST00000412649 DLX6P56179 175 aa11.17□□□□□ -0.62
CLTCL1-201ENST00000412649 WT1-ASQ06250 92 aa11.17□□□□□ -0.62
CLTCL1-201ENST00000412649 LAGE3Q14657 143 aa11.17□□□□□ -0.62
CLTCL1-201ENST00000412649 C17orf58Q2M2W7 97 aa11.17□□□□□ -0.62
CLTCL1-201ENST00000412649 PPP1R27Q86WC6 154 aa11.17□□□□□ -0.62
CLTCL1-201ENST00000412649 MED12LQ86YW9 2145 aa11.17□□□□□ -0.62
CLTCL1-201ENST00000412649 LYPD1Q8N2G4 141 aa11.17□□□□□ -0.62
CLTCL1-201ENST00000412649 Q8N7P7 452 aa11.17□□□□□ -0.62
CLTCL1-201ENST00000412649 TMEM75Q8N9X5 138 aa11.17□□□□□ -0.62
CLTCL1-201ENST00000412649 A0A1W2PPI3 338 aa11.17□□□□□ -0.62
CLTCL1-201ENST00000412649 C11orf53Q8IXP5 236 aa11.17□□□□□ -0.62
CLTCL1-201ENST00000412649 TMEM133Q9H2Q1 129 aa11.17□□□□□ -0.62
CLTCL1-201ENST00000412649 COX6CP09669 75 aa11.17□□□□□ -0.62
CLTCL1-201ENST00000412649 RNFT1Q5M7Z0 435 aa11.17□□□□□ -0.62
CLTCL1-201ENST00000412649 LCNL1Q6ZST4 164 aa11.17□□□□□ -0.62
CLTCL1-201ENST00000412649 C9orf106Q8NAJ2 232 aa11.17□□□□□ -0.62
CLTCL1-201ENST00000412649 C2orf16Q68DN1 1984 aa11.17□□□□□ -0.62
CLTCL1-201ENST00000412649 IGKV2-40A0A087WW87 121 aaPredicted RBP11.16□□□□□ -0.62
CLTCL1-201ENST00000412649 IGKV2D-40P01614 121 aaPredicted RBP11.16□□□□□ -0.62
CLTCL1-201ENST00000412649 NTN3O00634 580 aaPredicted RBP11.16□□□□□ -0.62
CLTCL1-201ENST00000412649 WFDC2Q14508 124 aa11.16□□□□□ -0.62
CLTCL1-201ENST00000412649 THAP8Q8NA92 274 aa11.16□□□□□ -0.62
CLTCL1-201ENST00000412649 EIF4EBP1Q13541 118 aaPredicted RBP11.16□□□□□ -0.62
CLTCL1-201ENST00000412649 ZNF256Q9Y2P7 627 aaPredicted RBP11.16□□□□□ -0.62
CLTCL1-201ENST00000412649 ATP1A1-AS1Q5TC04 95 aa11.16□□□□□ -0.62
CLTCL1-201ENST00000412649 BEX4Q9NWD9 120 aaPredicted RBP11.16□□□□□ -0.62
CLTCL1-201ENST00000412649 LTBP2Q14767 1821 aa11.16□□□□□ -0.62
CLTCL1-201ENST00000412649 IGKV3-15P01624 115 aa11.15□□□□□ -0.62
CLTCL1-201ENST00000412649 FXYD2P54710 66 aa11.15□□□□□ -0.62
CLTCL1-201ENST00000412649 FAM120AOSQ5T036 256 aa11.15□□□□□ -0.62
CLTCL1-201ENST00000412649 TMEM170BQ5T4T1 132 aa11.15□□□□□ -0.62
CLTCL1-201ENST00000412649 PHLDA3Q9Y5J5 127 aa11.15□□□□□ -0.62
CLTCL1-201ENST00000412649 NPYP01303 97 aa11.15□□□□□ -0.62
CLTCL1-201ENST00000412649 PATE2Q6UY27 113 aa11.15□□□□□ -0.62
CLTCL1-201ENST00000412649 DDB2Q92466 427 aa11.15□□□□□ -0.62
CLTCL1-201ENST00000412649 TNFRSF6BO95407 300 aa11.15□□□□□ -0.62
CLTCL1-201ENST00000412649 EMP1P54849 157 aa11.15□□□□□ -0.62
CLTCL1-201ENST00000412649 IGHV3-35A0A0C4DH35 117 aa11.15□□□□□ -0.63
CLTCL1-201ENST00000412649 TAL2Q16559 108 aa11.15□□□□□ -0.63
CLTCL1-201ENST00000412649 C12orf74Q32Q52 190 aa11.15□□□□□ -0.63
CLTCL1-201ENST00000412649 TRIP6Q15654 476 aaKnown RBP11.14□□□□□ -0.63
CLTCL1-201ENST00000412649 FOXI2Q6ZQN5 318 aa11.14□□□□□ -0.63
CLTCL1-201ENST00000412649 GAFA1Q96PS6 74 aa11.14□□□□□ -0.63
CLTCL1-201ENST00000412649 KLF12Q9Y4X4 402 aa11.14□□□□□ -0.63
CLTCL1-201ENST00000412649 TNRC6AQ8NDV7 1962 aaKnown RBP11.14□□□□□ -0.63
CLTCL1-201ENST00000412649 JMJD8Q96S16 334 aa11.14□□□□□ -0.63
CLTCL1-201ENST00000412649 TRAV26-1A0A087WT03 109 aa11.14□□□□□ -0.63
CLTCL1-201ENST00000412649 CADP27708 2225 aa11.14□□□□□ -0.63
CLTCL1-201ENST00000412649 WNK2Q9Y3S1 2297 aa11.14□□□□□ -0.63
CLTCL1-201ENST00000412649 IGLL5B9A064 214 aa11.13□□□□□ -0.63
CLTCL1-201ENST00000412649 ORMDL2Q53FV1 153 aa11.13□□□□□ -0.63
CLTCL1-201ENST00000412649 TNCP24821 2201 aa11.13□□□□□ -0.63
CLTCL1-201ENST00000412649 TRBV25-1A0A075B6N4 114 aa11.13□□□□□ -0.63
CLTCL1-201ENST00000412649 C9orf172C9J069 976 aa11.13□□□□□ -0.63
CLTCL1-201ENST00000412649 H7C1H1 209 aa11.13□□□□□ -0.63
CLTCL1-201ENST00000412649 Q8TAT8 98 aa11.13□□□□□ -0.63
CLTCL1-201ENST00000412649 PPDPFLQ8WWR9 84 aa11.13□□□□□ -0.63
CLTCL1-201ENST00000412649 C8orf49Q96NF6 230 aa11.13□□□□□ -0.63
CLTCL1-201ENST00000412649 M0R381 172 aa11.13□□□□□ -0.63
CLTCL1-201ENST00000412649 PRTN3P24158 256 aa11.13□□□□□ -0.63
CLTCL1-201ENST00000412649 TRBV19A0A075B6N1 114 aa11.13□□□□□ -0.63
CLTCL1-201ENST00000412649 PROP1O75360 226 aa11.13□□□□□ -0.63
CLTCL1-201ENST00000412649 IGHV1-46P01743 117 aa11.13□□□□□ -0.63
CLTCL1-201ENST00000412649 SHANK2-AS3Q9BTD1 123 aa11.13□□□□□ -0.63
CLTCL1-201ENST00000412649 C21orf62Q9NYP8 219 aa11.13□□□□□ -0.63
CLTCL1-201ENST00000412649 PRSS2P07478 247 aa11.12□□□□□ -0.63
CLTCL1-201ENST00000412649 APOBEC3AP31941 199 aaPredicted RBP11.12□□□□□ -0.63
CLTCL1-201ENST00000412649 NKX2-8O15522 239 aa11.12□□□□□ -0.63
CLTCL1-201ENST00000412649 PRSS47A8MTI9 375 aa11.12□□□□□ -0.63
CLTCL1-201ENST00000412649 KLK10O43240 276 aa11.12□□□□□ -0.63
CLTCL1-201ENST00000412649 C16orf97H3BN30 126 aa11.12□□□□□ -0.63
CLTCL1-201ENST00000412649 IGHV3-23P01764 117 aa11.12□□□□□ -0.63
CLTCL1-201ENST00000412649 TMEM14CQ9P0S9 112 aa11.12□□□□□ -0.63
CLTCL1-201ENST00000412649 RRN3P1Q2M238 152 aa11.11□□□□□ -0.63
CLTCL1-201ENST00000412649 ZNF833PQ6ZTB9 187 aa11.11□□□□□ -0.63
CLTCL1-201ENST00000412649 C2orf91Q6ZV80 131 aa11.11□□□□□ -0.63
CLTCL1-201ENST00000412649 C16orf92Q96LL3 132 aa11.11□□□□□ -0.63
CLTCL1-201ENST00000412649 HIGD1BQ9P298 99 aa11.11□□□□□ -0.63
CLTCL1-201ENST00000412649 CRYBA4P53673 196 aa11.11□□□□□ -0.63
CLTCL1-201ENST00000412649 PAPPA-AS1Q5QFB9 102 aa11.11□□□□□ -0.63
CLTCL1-201ENST00000412649 MRPL35Q9NZE8 188 aaKnown RBP11.11□□□□□ -0.63
CLTCL1-201ENST00000412649 IGHV3OR16-8A0A075B7F1 116 aa11.11□□□□□ -0.63
CLTCL1-201ENST00000412649 C19orf71A6NCJ1 209 aa11.11□□□□□ -0.63
CLTCL1-201ENST00000412649 TMEM200BQ69YZ2 307 aa11.11□□□□□ -0.63
CLTCL1-201ENST00000412649 LY6G6EA0A0G2JKS1 128 aa11.1□□□□□ -0.63
CLTCL1-201ENST00000412649 ECSCRQ19T08 205 aa11.1□□□□□ -0.63
CLTCL1-201ENST00000412649 U3KQA8 63 aa11.1□□□□□ -0.63
CLTCL1-201ENST00000412649 EML6Q6ZMW3 1958 aa11.1□□□□□ -0.63
CLTCL1-201ENST00000412649 PRSS22Q9GZN4 317 aa11.1□□□□□ -0.63
CLTCL1-201ENST00000412649 LINC01549A6NIU2 74 aa11.1□□□□□ -0.63
CLTCL1-201ENST00000412649 DUX4L9Q6RFH8 374 aaPredicted RBP11.1□□□□□ -0.63
CLTCL1-201ENST00000412649 KIR2DL4Q99706 377 aa11.1□□□□□ -0.63
CLTCL1-201ENST00000412649 ZDBF2Q9HCK1 2354 aa11.1□□□□□ -0.63
CLTCL1-201ENST00000412649 TTTY13Q9BZ97 58 aa11.1□□□□□ -0.63
CLTCL1-201ENST00000412649 PPP1R17O96001 155 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms