RNA–Protein interactions for RNA: ENST00000412274.6

DDR1-230, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-230ENST00000412274 IGHV4-28A0A0C4DH34 117 aa11.74□□□□□ -0.53
DDR1-230ENST00000412274 MRPS12O15235 138 aaKnown RBP11.74□□□□□ -0.53
DDR1-230ENST00000412274 TCTAP57738 103 aa11.74□□□□□ -0.53
DDR1-230ENST00000412274 NHLH2Q02577 135 aa11.74□□□□□ -0.53
DDR1-230ENST00000412274 MIC13Q5XKP0 118 aa11.74□□□□□ -0.53
DDR1-230ENST00000412274 ZNF709Q8N972 641 aa11.74□□□□□ -0.53
DDR1-230ENST00000412274 ZNF738Q8NE65 137 aa11.74□□□□□ -0.53
DDR1-230ENST00000412274 PHLDA1Q8WV24 401 aaPredicted RBP11.74□□□□□ -0.53
DDR1-230ENST00000412274 C20orf173Q96LM9 149 aa11.74□□□□□ -0.53
DDR1-230ENST00000412274 OR5AC2Q9NZP5 309 aa11.74□□□□□ -0.53
DDR1-230ENST00000412274 PXMP4Q9Y6I8 212 aa11.74□□□□□ -0.53
DDR1-230ENST00000412274 TRAV8-2A0A0B4J237 113 aa11.73□□□□□ -0.53
DDR1-230ENST00000412274 ZNF705FA8MVS1 300 aaPredicted RBP11.73□□□□□ -0.53
DDR1-230ENST00000412274 C17orf112F2Z3M2 114 aa11.73□□□□□ -0.53
DDR1-230ENST00000412274 MPC2O95563 127 aa11.73□□□□□ -0.53
DDR1-230ENST00000412274 IGKV3-20P01619 116 aa11.73□□□□□ -0.53
DDR1-230ENST00000412274 ZNF705DP0CH99 300 aaPredicted RBP11.73□□□□□ -0.53
DDR1-230ENST00000412274 ZNF705BP0CI00 300 aaPredicted RBP11.73□□□□□ -0.53
DDR1-230ENST00000412274 CXCL3P19876 107 aa11.73□□□□□ -0.53
DDR1-230ENST00000412274 NPCDR1Q9BY65 106 aa11.73□□□□□ -0.53
DDR1-230ENST00000412274 ZNF331Q9NQX6 463 aaPredicted RBP11.73□□□□□ -0.53
DDR1-230ENST00000412274 TENM2Q9NT68 2774 aa11.73□□□□□ -0.53
DDR1-230ENST00000412274 TEX48A0A1B0GUV7 120 aa11.72□□□□□ -0.53
DDR1-230ENST00000412274 F6UB75 175 aa11.72□□□□□ -0.53
DDR1-230ENST00000412274 H0YIZ8 118 aa11.72□□□□□ -0.53
DDR1-230ENST00000412274 ZNF253O75346 499 aa11.72□□□□□ -0.53
DDR1-230ENST00000412274 RBMY1A1P0DJD3 496 aaKnown RBP11.72□□□□□ -0.53
DDR1-230ENST00000412274 RBMY1CP0DJD4 496 aa11.72□□□□□ -0.53
DDR1-230ENST00000412274 RBMY1FQ15415 496 aaKnown RBP11.72□□□□□ -0.53
DDR1-230ENST00000412274 ASB13Q8WXK3 278 aa11.72□□□□□ -0.53
DDR1-230ENST00000412274 DYNC2H1Q8NCM8 4307 aaKnown RBP11.72□□□□□ -0.53
DDR1-230ENST00000412274 CNN1P51911 297 aaKnown RBP11.71□□□□□ -0.53
DDR1-230ENST00000412274 NANOS2P60321 138 aaKnown RBP11.71□□□□□ -0.53
DDR1-230ENST00000412274 RNF182Q8N6D2 247 aa11.71□□□□□ -0.53
DDR1-230ENST00000412274 OR8A1Q8NGG7 326 aa11.71□□□□□ -0.53
DDR1-230ENST00000412274 IGF2BP2-AS1Q96M15 143 aa11.71□□□□□ -0.53
DDR1-230ENST00000412274 RNF126Q9BV68 326 aa11.71□□□□□ -0.53
DDR1-230ENST00000412274 PPP1R14DQ9NXH3 145 aa11.71□□□□□ -0.53
DDR1-230ENST00000412274 TMEM14CQ9P0S9 112 aa11.71□□□□□ -0.53
DDR1-230ENST00000412274 RFNGQ9Y644 331 aa11.71□□□□□ -0.53
DDR1-230ENST00000412274 RYR3Q15413 4870 aa11.71□□□□□ -0.54
DDR1-230ENST00000412274 DEFB4AO15263 64 aa11.7□□□□□ -0.54
DDR1-230ENST00000412274 IGLC2P0DOY2 106 aa11.7□□□□□ -0.54
DDR1-230ENST00000412274 RPL12P30050 165 aaKnown RBP11.7□□□□□ -0.54
DDR1-230ENST00000412274 DEFB1P60022 68 aa11.7□□□□□ -0.54
DDR1-230ENST00000412274 PDE6HQ13956 83 aa11.7□□□□□ -0.54
DDR1-230ENST00000412274 AMTNQ6UX39 209 aa11.7□□□□□ -0.54
DDR1-230ENST00000412274 RPUSD4Q96CM3 377 aaKnown RBP11.7□□□□□ -0.54
DDR1-230ENST00000412274 ATP5SQ99766 215 aa11.7□□□□□ -0.54
DDR1-230ENST00000412274 WDR61Q9GZS3 305 aaKnown RBP11.7□□□□□ -0.54
DDR1-230ENST00000412274 SLC35B3Q9H1N7 401 aa11.7□□□□□ -0.54
DDR1-230ENST00000412274 HSPB11Q9Y547 144 aa11.7□□□□□ -0.54
DDR1-230ENST00000412274 INSP01308 110 aa11.69□□□□□ -0.54
DDR1-230ENST00000412274 IFNA5P01569 189 aa11.69□□□□□ -0.54
DDR1-230ENST00000412274 HBE1P02100 147 aa11.69□□□□□ -0.54
DDR1-230ENST00000412274 CLINT1Q14677 625 aa11.69□□□□□ -0.54
DDR1-230ENST00000412274 OR11H7Q8NGC8 314 aa11.69□□□□□ -0.54
DDR1-230ENST00000412274 OR10J6PQ8NGY7 276 aa11.69□□□□□ -0.54
DDR1-230ENST00000412274 THAP6Q8TBB0 222 aa11.69□□□□□ -0.54
DDR1-230ENST00000412274 C2CD4CQ8TF44 421 aa11.69□□□□□ -0.54
DDR1-230ENST00000412274 SAT2Q96F10 170 aaPredicted RBP11.69□□□□□ -0.54
DDR1-230ENST00000412274 PARD6GQ9BYG4 376 aaPredicted RBP11.69□□□□□ -0.54
DDR1-230ENST00000412274 ALG5Q9Y673 324 aa11.69□□□□□ -0.54
DDR1-230ENST00000412274 BOLA2-SMG1P6H3BVE0 249 aa11.68□□□□□ -0.54
DDR1-230ENST00000412274 SPART-AS1P0CW21 52 aa11.68□□□□□ -0.54
DDR1-230ENST00000412274 HIST1H1EP10412 219 aaKnown RBP11.68□□□□□ -0.54
DDR1-230ENST00000412274 FXYD7P58549 80 aa11.68□□□□□ -0.54
DDR1-230ENST00000412274 RHOBP62745 196 aa11.68□□□□□ -0.54
DDR1-230ENST00000412274 HIST1H1AQ02539 215 aaPredicted RBP11.68□□□□□ -0.54
DDR1-230ENST00000412274 IGFL4Q6B9Z1 124 aa11.68□□□□□ -0.54
DDR1-230ENST00000412274 TMEM256Q8N2U0 113 aa11.68□□□□□ -0.54
DDR1-230ENST00000412274 SCGB1C1Q8TD33 95 aa11.68□□□□□ -0.54
DDR1-230ENST00000412274 TMEM208Q9BTX3 173 aa11.68□□□□□ -0.54
DDR1-230ENST00000412274 MRPL32Q9BYC8 188 aaKnown RBP11.68□□□□□ -0.54
DDR1-230ENST00000412274 MED28Q9H204 178 aa11.68□□□□□ -0.54
DDR1-230ENST00000412274 PRELID1Q9Y255 219 aa11.68□□□□□ -0.54
DDR1-230ENST00000412274 IGHV3OR16-12A0A075B7B8 117 aa11.67□□□□□ -0.54
DDR1-230ENST00000412274 TRAV10A0A0B4J240 114 aa11.67□□□□□ -0.54
DDR1-230ENST00000412274 HLA-DMBP28068 263 aa11.67□□□□□ -0.54
DDR1-230ENST00000412274 TSPOP30536 169 aa11.67□□□□□ -0.54
DDR1-230ENST00000412274 RRN3P1Q2M238 152 aa11.67□□□□□ -0.54
DDR1-230ENST00000412274 MORN5Q5VZ52 161 aa11.67□□□□□ -0.54
DDR1-230ENST00000412274 MRPL53Q96EL3 112 aaKnown RBP11.67□□□□□ -0.54
DDR1-230ENST00000412274 TRBV19A0A075B6N1 114 aa11.66□□□□□ -0.54
DDR1-230ENST00000412274 H3BQ15 152 aa11.66□□□□□ -0.54
DDR1-230ENST00000412274 C1orf158Q8N1D5 194 aa11.66□□□□□ -0.54
DDR1-230ENST00000412274 LINC00476Q8WZB0 136 aa11.66□□□□□ -0.54
DDR1-230ENST00000412274 C20orf144Q9BQM9 153 aa11.66□□□□□ -0.54
DDR1-230ENST00000412274 MBD2Q9UBB5 411 aa11.66□□□□□ -0.54
DDR1-230ENST00000412274 TRAV5A0A0B4J249 113 aa11.65□□□□□ -0.54
DDR1-230ENST00000412274 CDKN1BP46527 198 aa11.65□□□□□ -0.54
DDR1-230ENST00000412274 OXA1LQ15070 435 aa11.65□□□□□ -0.54
DDR1-230ENST00000412274 SPINK13Q1W4C9 94 aa11.65□□□□□ -0.54
DDR1-230ENST00000412274 ZNF586Q9NXT0 402 aa11.65□□□□□ -0.54
DDR1-230ENST00000412274 TIMM9Q9Y5J7 89 aa11.65□□□□□ -0.54
DDR1-230ENST00000412274 SACSQ9NZJ4 4579 aa11.65□□□□□ -0.55
DDR1-230ENST00000412274 PLECQ15149 4684 aaKnown RBP11.64□□□□□ -0.55
DDR1-230ENST00000412274 CRXO43186 299 aaPredicted RBP11.64□□□□□ -0.55
DDR1-230ENST00000412274 RGS21Q2M5E4 152 aa11.64□□□□□ -0.55
DDR1-230ENST00000412274 ODF3Q96PU9 254 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms