RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 C17orf77Q96MU5 243 aa4.13□□□□□ -1.75
HERC4-205ENST00000412272 GFRA4Q9GZZ7 299 aa4.13□□□□□ -1.75
HERC4-205ENST00000412272 MPDZO75970 2070 aa4.12□□□□□ -1.75
HERC4-205ENST00000412272 CEP350Q5VT06 3117 aa4.12□□□□□ -1.75
HERC4-205ENST00000412272 A0A096LNJ9 63 aa4.12□□□□□ -1.75
HERC4-205ENST00000412272 SLC25A16P16260 332 aa4.12□□□□□ -1.75
HERC4-205ENST00000412272 ZNF138P52744 262 aa4.12□□□□□ -1.75
HERC4-205ENST00000412272 EIF4EBP1Q13541 118 aaPredicted RBP4.12□□□□□ -1.75
HERC4-205ENST00000412272 C7orf69Q9H7B7 122 aa4.12□□□□□ -1.75
HERC4-205ENST00000412272 AGRNO00468 2067 aa4.12□□□□□ -1.75
HERC4-205ENST00000412272 PRNPP04156 253 aa4.12□□□□□ -1.75
HERC4-205ENST00000412272 ARL14EPLP0DKL9 152 aa4.12□□□□□ -1.75
HERC4-205ENST00000412272 COX6A1P12074 109 aa4.12□□□□□ -1.75
HERC4-205ENST00000412272 COL8A2P25067 703 aa4.12□□□□□ -1.75
HERC4-205ENST00000412272 MFAP2P55001 183 aa4.12□□□□□ -1.75
HERC4-205ENST00000412272 TMEM190Q8WZ59 177 aa4.12□□□□□ -1.75
HERC4-205ENST00000412272 PRDM6Q9NQX0 595 aa4.12□□□□□ -1.75
HERC4-205ENST00000412272 TRAV17A0A0B4J275 112 aa4.12□□□□□ -1.75
HERC4-205ENST00000412272 MYMXA0A1B0GTQ4 84 aa4.12□□□□□ -1.75
HERC4-205ENST00000412272 TEX22C9J3V5 150 aa4.12□□□□□ -1.75
HERC4-205ENST00000412272 EFNA2O43921 213 aa4.12□□□□□ -1.75
HERC4-205ENST00000412272 LINC00271P0C7V0 271 aa4.12□□□□□ -1.75
HERC4-205ENST00000412272 HOXB4P17483 251 aaPredicted RBP4.12□□□□□ -1.75
HERC4-205ENST00000412272 CD24P25063 80 aa4.12□□□□□ -1.75
HERC4-205ENST00000412272 CENPWQ5EE01 88 aa4.12□□□□□ -1.75
HERC4-205ENST00000412272 GTSCR1Q86UQ5 136 aa4.12□□□□□ -1.75
HERC4-205ENST00000412272 ZNF503Q96F45 646 aa4.12□□□□□ -1.75
HERC4-205ENST00000412272 CCL28Q9NRJ3 127 aa4.12□□□□□ -1.75
HERC4-205ENST00000412272 DEPPQ9NTK1 212 aa4.12□□□□□ -1.75
HERC4-205ENST00000412272 IGKV1-27A0A075B6S5 117 aa4.11□□□□□ -1.75
HERC4-205ENST00000412272 IGKV1-6A0A0C4DH72 117 aa4.11□□□□□ -1.75
HERC4-205ENST00000412272 LINC01546A6NGU7 62 aa4.11□□□□□ -1.75
HERC4-205ENST00000412272 LILRA5A6NI73 299 aa4.11□□□□□ -1.75
HERC4-205ENST00000412272 LGALS9O00182 355 aa4.11□□□□□ -1.75
HERC4-205ENST00000412272 IL4P05112 153 aa4.11□□□□□ -1.75
HERC4-205ENST00000412272 IAPPP10997 89 aa4.11□□□□□ -1.75
HERC4-205ENST00000412272 RPS18P62269 152 aaKnown RBP4.11□□□□□ -1.75
HERC4-205ENST00000412272 HIST1H4AP62805 103 aaKnown RBP4.11□□□□□ -1.75
HERC4-205ENST00000412272 CD69Q07108 199 aa4.11□□□□□ -1.75
HERC4-205ENST00000412272 DEFB134Q4QY38 66 aa4.11□□□□□ -1.75
HERC4-205ENST00000412272 DGAT2L7PQ6IED9 249 aa4.11□□□□□ -1.75
HERC4-205ENST00000412272 C11orf45Q8TAV5 145 aa4.11□□□□□ -1.75
HERC4-205ENST00000412272 C16orf92Q96LL3 132 aa4.11□□□□□ -1.75
HERC4-205ENST00000412272 GNG12Q9UBI6 72 aa4.11□□□□□ -1.75
HERC4-205ENST00000412272 STATHP02808 62 aa4.11□□□□□ -1.75
HERC4-205ENST00000412272 P0DMU3 169 aa4.11□□□□□ -1.75
HERC4-205ENST00000412272 FAM231AP0DMU4 169 aa4.11□□□□□ -1.75
HERC4-205ENST00000412272 FAM231CP0DMU5 169 aa4.11□□□□□ -1.75
HERC4-205ENST00000412272 GP1BBP13224 206 aa4.11□□□□□ -1.75
HERC4-205ENST00000412272 SLC25A48Q6ZT89 311 aaKnown RBP4.11□□□□□ -1.75
HERC4-205ENST00000412272 TRGV9Q99603 122 aa4.11□□□□□ -1.75
HERC4-205ENST00000412272 PRDM14Q9GZV8 571 aa4.11□□□□□ -1.75
HERC4-205ENST00000412272 ZMAT4Q9H898 229 aa4.11□□□□□ -1.75
HERC4-205ENST00000412272 OTORQ9NRC9 128 aa4.11□□□□□ -1.75
HERC4-205ENST00000412272 TMEM167BQ9NRX6 74 aa4.11□□□□□ -1.75
HERC4-205ENST00000412272 EYSQ5T1H1 3165 aa4.11□□□□□ -1.75
HERC4-205ENST00000412272 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.11□□□□□ -1.75
HERC4-205ENST00000412272 FAM240AA0A1B0GVK7 77 aa4.11□□□□□ -1.75
HERC4-205ENST00000412272 A0A1W2PRU2 124 aa4.11□□□□□ -1.75
HERC4-205ENST00000412272 SLC25A20O43772 301 aa4.11□□□□□ -1.75
HERC4-205ENST00000412272 NPYP01303 97 aa4.11□□□□□ -1.75
HERC4-205ENST00000412272 HILS1P60008 231 aa4.11□□□□□ -1.75
HERC4-205ENST00000412272 CACNG7P62955 275 aa4.11□□□□□ -1.75
HERC4-205ENST00000412272 ZNF56Q15929 161 aa4.11□□□□□ -1.75
HERC4-205ENST00000412272 TMEM155Q4W5P6 130 aa4.11□□□□□ -1.75
HERC4-205ENST00000412272 SPANXN5Q5MJ07 72 aa4.11□□□□□ -1.75
HERC4-205ENST00000412272 FP248Q71RG6 208 aaPredicted RBP4.11□□□□□ -1.75
HERC4-205ENST00000412272 BORCS8Q96FH0 119 aa4.11□□□□□ -1.75
HERC4-205ENST00000412272 PLEKHA3Q9HB20 300 aa4.11□□□□□ -1.75
HERC4-205ENST00000412272 C2orf16Q68DN1 1984 aa4.1□□□□□ -1.75
HERC4-205ENST00000412272 IGHV3OR15-7A0A075B7D8 119 aa4.1□□□□□ -1.75
HERC4-205ENST00000412272 IGKV1-12A0A0C4DH73 117 aa4.1□□□□□ -1.75
HERC4-205ENST00000412272 H3BVH4 76 aa4.1□□□□□ -1.75
HERC4-205ENST00000412272 HOXA3O43365 443 aaPredicted RBP4.1□□□□□ -1.75
HERC4-205ENST00000412272 IGKV1D-12P01611 117 aa4.1□□□□□ -1.75
HERC4-205ENST00000412272 LINC01559Q495D7 138 aa4.1□□□□□ -1.75
HERC4-205ENST00000412272 C10orf128Q5T292 105 aa4.1□□□□□ -1.75
HERC4-205ENST00000412272 HEATR1Q9H583 2144 aaKnown RBP4.1□□□□□ -1.75
HERC4-205ENST00000412272 BRK1Q8WUW1 75 aa4.1□□□□□ -1.75
HERC4-205ENST00000412272 INS-IGF2F8WCM5 200 aa4.1□□□□□ -1.75
HERC4-205ENST00000412272 SPRY3O43610 288 aa4.1□□□□□ -1.75
HERC4-205ENST00000412272 GRNP28799 593 aaKnown RBP4.1□□□□□ -1.75
HERC4-205ENST00000412272 PAX8Q06710 450 aa4.1□□□□□ -1.75
HERC4-205ENST00000412272 IZUMO4Q1ZYL8 232 aa4.1□□□□□ -1.75
HERC4-205ENST00000412272 NTN5Q8WTR8 489 aaPredicted RBP4.1□□□□□ -1.75
HERC4-205ENST00000412272 PLPPR2Q96GM1 343 aa4.1□□□□□ -1.75
HERC4-205ENST00000412272 CALYQ9NYX4 217 aa4.1□□□□□ -1.75
HERC4-205ENST00000412272 TEX49A0A1B0GTD5 131 aa4.1□□□□□ -1.75
HERC4-205ENST00000412272 HBBP68871 147 aa4.1□□□□□ -1.75
HERC4-205ENST00000412272 SRYQ05066 204 aa4.1□□□□□ -1.75
HERC4-205ENST00000412272 VMA21Q3ZAQ7 101 aa4.1□□□□□ -1.75
HERC4-205ENST00000412272 PRSS22Q9GZN4 317 aa4.1□□□□□ -1.75
HERC4-205ENST00000412272 ZNF492Q9P255 531 aa4.1□□□□□ -1.75
HERC4-205ENST00000412272 RALGAPA1Q6GYQ0 2036 aa4.09□□□□□ -1.75
HERC4-205ENST00000412272 MRPS12O15235 138 aaKnown RBP4.09□□□□□ -1.75
HERC4-205ENST00000412272 CRYGSP22914 178 aa4.09□□□□□ -1.75
HERC4-205ENST00000412272 CRIP2P52943 208 aaPredicted RBP4.09□□□□□ -1.75
HERC4-205ENST00000412272 LOXL3P58215 753 aa4.09□□□□□ -1.75
HERC4-205ENST00000412272 ERVK-16P61578 105 aa4.09□□□□□ -1.75
HERC4-205ENST00000412272 DRAM1Q8N682 238 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms