RNA–Protein interactions for RNA: ENST00000409958.6

VSX1-204, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,305 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-204ENST00000409958 OR4B1Q8NGF8 309 aa15.11■□□□□ 0.01
VSX1-204ENST00000409958 CLEC5AQ9NY25 188 aa15.11■□□□□ 0.01
VSX1-204ENST00000409958 TRAV5A0A0B4J249 113 aa15.1■□□□□ 0.01
VSX1-204ENST00000409958 ZNF705EA8MWA4 302 aaPredicted RBP15.1■□□□□ 0.01
VSX1-204ENST00000409958 IGKV3-20P01619 116 aa15.1■□□□□ 0.01
VSX1-204ENST00000409958 GIPP09681 153 aaPredicted RBP15.1■□□□□ 0.01
VSX1-204ENST00000409958 IGLC2P0DOY2 106 aa15.1■□□□□ 0.01
VSX1-204ENST00000409958 SLC50A1Q9BRV3 221 aa15.1■□□□□ 0.01
VSX1-204ENST00000409958 HRH4Q9H3N8 390 aa15.1■□□□□ 0.01
VSX1-204ENST00000409958 XCL2Q9UBD3 114 aa15.1■□□□□ 0.01
VSX1-204ENST00000409958 A8MTW9 85 aa15.09■□□□□ 0.01
VSX1-204ENST00000409958 C17orf112F2Z3M2 114 aa15.09■□□□□ 0.01
VSX1-204ENST00000409958 IFNA5P01569 189 aa15.09■□□□□ 0.01
VSX1-204ENST00000409958 PSG9Q00887 426 aa15.09■□□□□ 0.01
VSX1-204ENST00000409958 ZNF738Q8NE65 137 aa15.09■□□□□ 0.01
VSX1-204ENST00000409958 SMIM3Q9BZL3 60 aa15.09■□□□□ 0.01
VSX1-204ENST00000409958 C11orf68Q9H3H3 251 aaKnown RBP15.09■□□□□ 0.01
VSX1-204ENST00000409958 ZNF331Q9NQX6 463 aaPredicted RBP15.09■□□□□ 0.01
VSX1-204ENST00000409958 DUSP14O95147 198 aaKnown RBP15.08■□□□□ 0
VSX1-204ENST00000409958 PSG3Q16557 428 aa15.08■□□□□ 0
VSX1-204ENST00000409958 GUK1Q16774 197 aa15.08■□□□□ 0
VSX1-204ENST00000409958 GCSAMLQ5JQS6 135 aa15.08■□□□□ 0
VSX1-204ENST00000409958 PARD6GQ9BYG4 376 aaPredicted RBP15.08■□□□□ 0
VSX1-204ENST00000409958 H3BQ15 152 aa15.07■□□□□ 0
VSX1-204ENST00000409958 SNRPCP09234 159 aaKnown RBP15.07■□□□□ 0
VSX1-204ENST00000409958 HLA-DMBP28068 263 aa15.07■□□□□ 0
VSX1-204ENST00000409958 SCGB1C1Q8TD33 95 aa15.07■□□□□ 0
VSX1-204ENST00000409958 TMEM14CQ9P0S9 112 aa15.07■□□□□ 0
VSX1-204ENST00000409958 MIFP14174 115 aa15.06■□□□□ 0
VSX1-204ENST00000409958 CNN1P51911 297 aaKnown RBP15.06■□□□□ 0
VSX1-204ENST00000409958 Q8NAQ8 132 aa15.06■□□□□ 0
VSX1-204ENST00000409958 SAT2Q96F10 170 aaPredicted RBP15.06■□□□□ 0
VSX1-204ENST00000409958 SLC35B3Q9H1N7 401 aa15.06■□□□□ 0
VSX1-204ENST00000409958 WFDC1Q9HC57 220 aa15.06■□□□□ 0
VSX1-204ENST00000409958 X6R8D5 127 aa15.06■□□□□ 0
VSX1-204ENST00000409958 SLC17A3O00476 420 aa15.05■□□□□ -0
VSX1-204ENST00000409958 FXYD7P58549 80 aa15.05■□□□□ -0
VSX1-204ENST00000409958 AMTNQ6UX39 209 aa15.05■□□□□ -0
VSX1-204ENST00000409958 AQP10Q96PS8 301 aa15.05■□□□□ -0
VSX1-204ENST00000409958 H3BTX0 84 aa15.04■□□□□ -0
VSX1-204ENST00000409958 ZNF253O75346 499 aa15.04■□□□□ -0
VSX1-204ENST00000409958 Q5BKY6 102 aa15.04■□□□□ -0
VSX1-204ENST00000409958 OR8A1Q8NGG7 326 aa15.04■□□□□ -0
VSX1-204ENST00000409958 RPUSD4Q96CM3 377 aaKnown RBP15.04■□□□□ -0
VSX1-204ENST00000409958 MRPL32Q9BYC8 188 aaKnown RBP15.04■□□□□ -0
VSX1-204ENST00000409958 MFFQ9GZY8 342 aa15.04■□□□□ -0
VSX1-204ENST00000409958 ZNF586Q9NXT0 402 aa15.04■□□□□ -0
VSX1-204ENST00000409958 IGHV4-28A0A0C4DH34 117 aa15.03■□□□□ -0
VSX1-204ENST00000409958 ZNF705DP0CH99 300 aaPredicted RBP15.03■□□□□ -0
VSX1-204ENST00000409958 ZNF705BP0CI00 300 aaPredicted RBP15.03■□□□□ -0
VSX1-204ENST00000409958 HIST1H1EP10412 219 aaKnown RBP15.03■□□□□ -0
VSX1-204ENST00000409958 ZNF705AQ6ZN79 300 aaPredicted RBP15.03■□□□□ -0
VSX1-204ENST00000409958 SLC25A2Q9BXI2 301 aa15.03■□□□□ -0
VSX1-204ENST00000409958 TRBV19A0A075B6N1 114 aa15.02■□□□□ -0
VSX1-204ENST00000409958 DEFB4AO15263 64 aa15.02■□□□□ -0
VSX1-204ENST00000409958 RBMY1A1P0DJD3 496 aaKnown RBP15.02■□□□□ -0
VSX1-204ENST00000409958 RBMY1CP0DJD4 496 aa15.02■□□□□ -0
VSX1-204ENST00000409958 RBMY1FQ15415 496 aaKnown RBP15.02■□□□□ -0
VSX1-204ENST00000409958 FFAR4Q5NUL3 377 aa15.02■□□□□ -0
VSX1-204ENST00000409958 MIR17HGQ75NE6 70 aa15.02■□□□□ -0
VSX1-204ENST00000409958 FAM167A-AS1Q96KT0 104 aa15.02■□□□□ -0
VSX1-204ENST00000409958 NEU1Q99519 415 aa15.02■□□□□ -0
VSX1-204ENST00000409958 FUT9Q9Y231 359 aa15.02■□□□□ -0
VSX1-204ENST00000409958 TENM2Q9NT68 2774 aa15.01□□□□□ -0.01
VSX1-204ENST00000409958 CXorf65A6NEN9 183 aa15.01□□□□□ -0.01
VSX1-204ENST00000409958 ZNF705FA8MVS1 300 aaPredicted RBP15.01□□□□□ -0.01
VSX1-204ENST00000409958 AMBPP02760 352 aa15.01□□□□□ -0.01
VSX1-204ENST00000409958 PYYP10082 97 aa15.01□□□□□ -0.01
VSX1-204ENST00000409958 HIST1H1AQ02539 215 aaPredicted RBP15.01□□□□□ -0.01
VSX1-204ENST00000409958 PDE6HQ13956 83 aa15.01□□□□□ -0.01
VSX1-204ENST00000409958 ZNF266Q14584 549 aa15.01□□□□□ -0.01
VSX1-204ENST00000409958 OR2T35Q8NGX2 323 aa15.01□□□□□ -0.01
VSX1-204ENST00000409958 PMS2P11Q13670 270 aa15□□□□□ -0.01
VSX1-204ENST00000409958 C11orf45Q8TAV5 145 aa15□□□□□ -0.01
VSX1-204ENST00000409958 TIMM9Q9Y5J7 89 aa15□□□□□ -0.01
VSX1-204ENST00000409958 SMIM9A6NGZ8 99 aa14.99□□□□□ -0.01
VSX1-204ENST00000409958 INO80EQ8NBZ0 244 aaPredicted RBP14.99□□□□□ -0.01
VSX1-204ENST00000409958 IGF2BP2-AS1Q96M15 143 aa14.99□□□□□ -0.01
VSX1-204ENST00000409958 OR51M1Q9H341 326 aa14.99□□□□□ -0.01
VSX1-204ENST00000409958 GOLT1BQ9Y3E0 138 aa14.99□□□□□ -0.01
VSX1-204ENST00000409958 FXYD6-FXYD2A0A087WZ82 144 aa14.98□□□□□ -0.01
VSX1-204ENST00000409958 NUPR2A6NF83 97 aa14.98□□□□□ -0.01
VSX1-204ENST00000409958 BOLA2-SMG1P6H3BVE0 249 aa14.98□□□□□ -0.01
VSX1-204ENST00000409958 NDUFB4O95168 129 aa14.98□□□□□ -0.01
VSX1-204ENST00000409958 RHOBP62745 196 aa14.98□□□□□ -0.01
VSX1-204ENST00000409958 SPINK13Q1W4C9 94 aa14.98□□□□□ -0.01
VSX1-204ENST00000409958 C1orf158Q8N1D5 194 aa14.98□□□□□ -0.01
VSX1-204ENST00000409958 MRPL53Q96EL3 112 aaKnown RBP14.98□□□□□ -0.01
VSX1-204ENST00000409958 DYNC2H1Q8NCM8 4307 aaKnown RBP14.98□□□□□ -0.01
VSX1-204ENST00000409958 IGHV3OR16-12A0A075B7B8 117 aa14.97□□□□□ -0.01
VSX1-204ENST00000409958 PRAC2D3DTV9 90 aa14.97□□□□□ -0.01
VSX1-204ENST00000409958 M0R2Z0 102 aa14.97□□□□□ -0.01
VSX1-204ENST00000409958 OR10J6PQ8NGY7 276 aa14.97□□□□□ -0.01
VSX1-204ENST00000409958 BLNKQ8WV28 456 aa14.97□□□□□ -0.01
VSX1-204ENST00000409958 PAXXQ9BUH6 204 aa14.97□□□□□ -0.01
VSX1-204ENST00000409958 PPP1R14DQ9NXH3 145 aa14.97□□□□□ -0.01
VSX1-204ENST00000409958 TNFSF18Q9UNG2 199 aa14.97□□□□□ -0.01
VSX1-204ENST00000409958 PRELID1Q9Y255 219 aa14.97□□□□□ -0.01
VSX1-204ENST00000409958 RFNGQ9Y644 331 aa14.97□□□□□ -0.01
VSX1-204ENST00000409958 RYR3Q15413 4870 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms